Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_M08
         (857 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive o...    23   2.7  
AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin ...    23   2.7  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   6.3  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   6.3  

>U70841-1|AAC47455.1|  377|Apis mellifera ultraviolet sensitive
           opsin protein.
          Length = 377

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
 Frame = -3

Query: 615 STNIPAELAKYISCF--WPTAIN 553
           ST +PA  AK +SC   W  AIN
Sbjct: 317 STMLPAVFAKTVSCIDPWIYAIN 339


>AF004168-1|AAC13417.1|  377|Apis mellifera blue-sensitive opsin
           protein.
          Length = 377

 Score = 23.4 bits (48), Expect = 2.7
 Identities = 12/23 (52%), Positives = 14/23 (60%), Gaps = 2/23 (8%)
 Frame = -3

Query: 615 STNIPAELAKYISCF--WPTAIN 553
           ST +PA  AK +SC   W  AIN
Sbjct: 317 STMLPAVFAKTVSCIDPWIYAIN 339


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 12/33 (36%), Positives = 14/33 (42%)
 Frame = +1

Query: 580 YIFC*LRWYICTENYRWSLV*NTFRNFLLLMDS 678
           Y F  L WY+C  + R       F N  LL  S
Sbjct: 777 YAFGILFWYLCAGHVRLPYTFEQFHNKELLWTS 809


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
           isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 6.3
 Identities = 12/33 (36%), Positives = 14/33 (42%)
 Frame = +1

Query: 580 YIFC*LRWYICTENYRWSLV*NTFRNFLLLMDS 678
           Y F  L WY+C  + R       F N  LL  S
Sbjct: 815 YAFGILFWYLCAGHVRLPYTFEQFHNKELLWTS 847


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 236,581
Number of Sequences: 438
Number of extensions: 5444
Number of successful extensions: 12
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27673956
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)