Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_M07
         (840 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY321364-1|AAP84718.1| 3241|Drosophila melanogaster PHD zinc fin...    31   1.5  
AE014296-31|AAS64921.1| 3241|Drosophila melanogaster CG7036-PB, ...    31   1.5  
AE014296-30|AAF47343.1| 3201|Drosophila melanogaster CG7036-PA, ...    31   1.5  
U31961-5|AAA84404.1|  424|Drosophila melanogaster protein ( Dros...    29   7.9  
AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-P...    29   7.9  

>AY321364-1|AAP84718.1| 3241|Drosophila melanogaster PHD zinc finger
            protein rhinoceros protein.
          Length = 3241

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = -1

Query: 720  RKRHASRRGERRTGIPVXGQGRNRGSARGSFQGKTPGIFIVL 595
            + R  + RG   +G P  G+GR RG  RG   G T G+ +VL
Sbjct: 2422 KPRQRAPRGSGGSGAPGRGRGRGRGRGRGG--GVTSGMAMVL 2461


>AE014296-31|AAS64921.1| 3241|Drosophila melanogaster CG7036-PB,
            isoform B protein.
          Length = 3241

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = -1

Query: 720  RKRHASRRGERRTGIPVXGQGRNRGSARGSFQGKTPGIFIVL 595
            + R  + RG   +G P  G+GR RG  RG   G T G+ +VL
Sbjct: 2422 KPRQRAPRGSGGSGAPGRGRGRGRGRGRGG--GVTSGMAMVL 2461


>AE014296-30|AAF47343.1| 3201|Drosophila melanogaster CG7036-PA,
            isoform A protein.
          Length = 3201

 Score = 31.5 bits (68), Expect = 1.5
 Identities = 17/42 (40%), Positives = 23/42 (54%)
 Frame = -1

Query: 720  RKRHASRRGERRTGIPVXGQGRNRGSARGSFQGKTPGIFIVL 595
            + R  + RG   +G P  G+GR RG  RG   G T G+ +VL
Sbjct: 2382 KPRQRAPRGSGGSGAPGRGRGRGRGRGRGG--GVTSGMAMVL 2421


>U31961-5|AAA84404.1|  424|Drosophila melanogaster protein (
           Drosophila melanogasterbithorax complex (BX-C), complete
           sequence. ).
          Length = 424

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 297 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 392
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 340 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 371


>AE014297-2268|AAF55361.3|  417|Drosophila melanogaster CG10349-PA
           protein.
          Length = 417

 Score = 29.1 bits (62), Expect = 7.9
 Identities = 13/32 (40%), Positives = 16/32 (50%)
 Frame = +3

Query: 297 ESANARGEAVCVLGALPLPRSLTRCARSFGCG 392
           ES      +VC  G LP+P  L  C +  GCG
Sbjct: 333 ESYQTTSASVCHSGWLPVPGHLAGCGQRRGCG 364


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 35,543,468
Number of Sequences: 53049
Number of extensions: 752929
Number of successful extensions: 2121
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1930
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2121
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4003789140
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)