Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_M07
         (840 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL117204-24|CAB55152.1|  298|Caenorhabditis elegans Hypothetical...    29   3.1  
U21323-8|AAA62552.1|  294|Caenorhabditis elegans Hypothetical pr...    28   7.2  

>AL117204-24|CAB55152.1|  298|Caenorhabditis elegans Hypothetical
           protein Y116A8C.37 protein.
          Length = 298

 Score = 29.5 bits (63), Expect = 3.1
 Identities = 23/99 (23%), Positives = 37/99 (37%)
 Frame = +1

Query: 457 KEHVSKRPAKGQEP*KGRVAGVFXXXXXXXTSITKIDAQVRGGETRQDYKDTRRFPLEAP 636
           K+ V K P  G+EP K  VA  F        +  + D      ++   +K+     + AP
Sbjct: 55  KKEVDKEPWSGEEPAKRMVANGFFTTTNVGGTFKQTDNFKTPMDSCPSFKNNMH-KIRAP 113

Query: 637 SCAPPVPTLAXYRNTCPPFSPSGSVALSHXSRCXYLSSV 753
            C  P   L    N    F  +  + +   +R   L+ V
Sbjct: 114 DCPIPEEKLVKLANGPESFICAAKITVPDFNRTMILTQV 152


>U21323-8|AAA62552.1|  294|Caenorhabditis elegans Hypothetical
           protein C45G9.9 protein.
          Length = 294

 Score = 28.3 bits (60), Expect = 7.2
 Identities = 13/33 (39%), Positives = 20/33 (60%)
 Frame = +2

Query: 563 STLKSEVAKPDRTIKIPGVFPWKLPRALPLFRP 661
           +T+K+ V +P   I   GV P   PR+ PL++P
Sbjct: 111 ATVKTVVPRPPTPIPPTGVKPEPAPRSEPLYQP 143


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,582,768
Number of Sequences: 27780
Number of extensions: 365269
Number of successful extensions: 945
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 893
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 945
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2077023564
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)