Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_M06
(974 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 44 3e-05
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 34 0.026
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.046
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 33 0.046
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 33 0.046
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 32 0.14
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 31 0.33
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 29 0.99
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 28 1.7
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 27 3.0
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 27 4.0
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 5.3
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 24 6.3
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 24 6.8
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 22 7.8
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 44.0 bits (99), Expect = 3e-05
Identities = 19/37 (51%), Positives = 19/37 (51%), Gaps = 3/37 (8%)
Frame = +2
Query: 872 AGCPXPXPPXPPXXGRXPXPPPP---XXXNPPPPPPP 973
A P P PP P G P PPPP PPPPPPP
Sbjct: 745 APAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 35.5 bits (78), Expect = 0.011
Identities = 17/36 (47%), Positives = 17/36 (47%), Gaps = 5/36 (13%)
Frame = +2
Query: 881 PXPXPPX----PPXXGRXPXPPP-PXXXNPPPPPPP 973
P P PP P P PPP P PPPPPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 32.3 bits (70), Expect = 0.11
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +2
Query: 887 PXPPXPPXXGRXPXPPPPXXXNPPPPP 967
P PP PP PPPP PPPPP
Sbjct: 761 PPPPPPPPGVAGAGPPPP----PPPPP 783
Score = 30.3 bits (65), Expect = 0.43
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +1
Query: 604 PPXPXXGXXXXPPTPXXXXXXXXFFXXPPPPPPP 705
PP P G PP P PPPPPPP
Sbjct: 753 PPAPIMGGPPPPPPPPGVAGAGP---PPPPPPPP 783
Score = 29.5 bits (63), Expect = 0.75
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +1
Query: 589 LSXQXPPXPXXGXXXXPPTPXXXXXXXXFFXXPPPPPPP 705
L PP P P P PPPPPPP
Sbjct: 729 LKSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 27.1 bits (57), Expect = 4.0
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = +2
Query: 881 PXPXPPXPPXXGRXPXPPPP 940
P P PP G P PPPP
Sbjct: 763 PPPPPPGVAGAGPPPPPPPP 782
Score = 25.8 bits (54), Expect = 9.3
Identities = 9/19 (47%), Positives = 10/19 (52%)
Frame = +2
Query: 917 RXPXPPPPXXXNPPPPPPP 973
+ P PPPP P P P P
Sbjct: 730 KSPPPPPPAVIVPTPAPAP 748
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 34.3 bits (75), Expect = 0.026
Identities = 13/29 (44%), Positives = 14/29 (48%)
Frame = +2
Query: 887 PXPPXPPXXGRXPXPPPPXXXNPPPPPPP 973
P PP P P PP + PPPPPP
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 32.7 bits (71), Expect = 0.081
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +2
Query: 881 PXPXPPXPPXXGRXPXPPPPXXXNPPPPP 967
P P PP G P PP PPPPP
Sbjct: 338 PPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 30.7 bits (66), Expect = 0.33
Identities = 15/36 (41%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Frame = +2
Query: 869 RAGCPXPXPPXPPXXGRXPXP--PPPXXXNPPPPPP 970
R+ P P P P GR P P NPP PPP
Sbjct: 358 RSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPP 393
Score = 29.9 bits (64), Expect = 0.57
Identities = 14/33 (42%), Positives = 15/33 (45%), Gaps = 4/33 (12%)
Frame = +2
Query: 887 PXPPXPPXXGRXPXPPPPXXXN----PPPPPPP 973
P PP PP PP + PPPPPPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 29.1 bits (62), Expect = 0.99
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +2
Query: 881 PXPXPPXPPXXGRXPXPPPPXXXNPPPPPPP 973
P P PP G+ P + PPPPPP
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPP 342
Score = 28.3 bits (60), Expect = 1.7
Identities = 12/31 (38%), Positives = 12/31 (38%)
Frame = +2
Query: 881 PXPXPPXPPXXGRXPXPPPPXXXNPPPPPPP 973
P P PP P PP P PPP P
Sbjct: 450 PPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 27.5 bits (58), Expect = 3.0
Identities = 12/28 (42%), Positives = 12/28 (42%), Gaps = 1/28 (3%)
Frame = +2
Query: 893 PPXPPXXGRXPXPP-PPXXXNPPPPPPP 973
PP PP R PPPPPPP
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPPPPPPP 317
Score = 26.6 bits (56), Expect = 5.3
Identities = 14/35 (40%), Positives = 14/35 (40%)
Frame = +1
Query: 685 PPPPPPPXLXLXXNNKXXXXFFFFFFXXPXPPPPP 789
PPPPPPP K P PPPPP
Sbjct: 311 PPPPPPP--SRRNRGKPPIGNGSSNSSLPPPPPPP 343
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 33.5 bits (73), Expect = 0.046
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +2
Query: 887 PXPPXPPXXGRXPXPPPPXXXNPPPPPPP 973
P PP PP P PP PP PPP
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 31.1 bits (67), Expect = 0.25
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +2
Query: 887 PXPPXPPXXGRXPXPPPPXXXNPPPPPPP 973
P PP PPPP PPP PP
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAPP 1722
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 5/36 (13%)
Frame = +2
Query: 881 PXPXPPXPPXXG-----RXPXPPPPXXXNPPPPPPP 973
P PP P P PPPP PPPP P
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAP 1721
Score = 27.1 bits (57), Expect = 4.0
Identities = 13/32 (40%), Positives = 13/32 (40%), Gaps = 3/32 (9%)
Frame = +2
Query: 881 PXPXPPX---PPXXGRXPXPPPPXXXNPPPPP 967
P P PP PP P P P PPP P
Sbjct: 1705 PTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 25.8 bits (54), Expect = 9.3
Identities = 11/27 (40%), Positives = 11/27 (40%)
Frame = +2
Query: 893 PPXPPXXGRXPXPPPPXXXNPPPPPPP 973
PP P P P P N PPPP
Sbjct: 1355 PPVRPAVPTSPKPQIPDSSNVHAPPPP 1381
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 33.5 bits (73), Expect = 0.046
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +2
Query: 887 PXPPXPPXXGRXPXPPPPXXXNPPPPPPP 973
P P P P P NPPPPPPP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPP 195
Score = 24.2 bits (50), Expect(2) = 4.8
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = +1
Query: 676 FXXPPPPPPP 705
+ PPPPPPP
Sbjct: 187 YNPPPPPPPP 196
Score = 23.8 bits (49), Expect(2) = 6.2
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 685 PPPPPPP 705
PPPPPPP
Sbjct: 191 PPPPPPP 197
Score = 20.6 bits (41), Expect(2) = 4.8
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +1
Query: 769 PXPPPPP 789
P PPPPP
Sbjct: 191 PPPPPPP 197
Score = 20.6 bits (41), Expect(2) = 6.2
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +1
Query: 769 PXPPPPP 789
P PPPPP
Sbjct: 238 PPPPPPP 244
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 33.5 bits (73), Expect = 0.046
Identities = 15/26 (57%), Positives = 15/26 (57%), Gaps = 2/26 (7%)
Frame = +2
Query: 902 PPXXGRXPXPPPPXXXNPP--PPPPP 973
PP G P PPPP PP PPPPP
Sbjct: 5 PP--GNPPPPPPPPGFEPPSQPPPPP 28
Score = 30.7 bits (66), Expect = 0.33
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +2
Query: 872 AGCPXPXPPXPPXXGRXPXPPPPXXXNPPPPPPP 973
A P PP PP P P PPPPPPP
Sbjct: 2 ASLPPGNPPPPP-----PPPGFEPPSQPPPPPPP 30
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 31.9 bits (69), Expect = 0.14
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -3
Query: 969 GGGGGGXFXXGGGGXGXRPXXGGXGGXG 886
G GGG GGG G P GG GG G
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFG 211
Score = 29.5 bits (63), Expect = 0.75
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -3
Query: 969 GGGGGGXFXXGGGGXGXRPXXGGXGGXG 886
GG GGG GGG G GG GG G
Sbjct: 245 GGFGGGLGGFGGGPGGFGGGPGGHGGPG 272
Score = 28.3 bits (60), Expect = 1.7
Identities = 16/34 (47%), Positives = 16/34 (47%), Gaps = 2/34 (5%)
Frame = -3
Query: 969 GGGGGGXFXXGG--GGXGXRPXXGGXGGXGXGQP 874
GG GGG GG GG G P G G G G P
Sbjct: 238 GGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGGP 271
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 30.7 bits (66), Expect = 0.33
Identities = 15/32 (46%), Positives = 16/32 (50%)
Frame = -3
Query: 972 GGGGGGGXFXXGGGGXGXRPXXGGXGGXGXGQ 877
GG GGG GGG G R GG GG G+
Sbjct: 26 GGFGGGRGGARGGGRGGARGGRGGRGGARGGR 57
Score = 26.6 bits (56), Expect = 5.3
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 1/36 (2%)
Frame = -3
Query: 972 GGGGGGGXFXXGGGGXGXRPXXGG-XGGXGXGQPAR 868
GGG GG GG G R GG GG G R
Sbjct: 29 GGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGR 64
Score = 26.2 bits (55), Expect = 7.0
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = -3
Query: 969 GGGGGGXFXXGGGGXGXRPXXGGXGGXGXGQPAR 868
GG GG GGG G R GG GG G+ R
Sbjct: 19 GGFNGGRGGFGGGRGGAR--GGGRGGARGGRGGR 50
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 29.1 bits (62), Expect = 0.99
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 887 PXPPXPPXXGRXPXPPPPXXXNPPPPP 967
P PP P R P PP PPP P
Sbjct: 128 PAPPTPQSELRPPTSAPPRPSIPPPSP 154
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 28.3 bits (60), Expect = 1.7
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 893 PPXPPXXGRXPXPPPPXXXNPPPPP 967
PP PP P P P P PPP
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPP 1213
Score = 27.5 bits (58), Expect = 3.0
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 893 PPXPPXXGRXPXPPPPXXXNPPPPPP 970
PP P P P P PP PPP
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPP 1194
Score = 27.5 bits (58), Expect = 3.0
Identities = 11/26 (42%), Positives = 13/26 (50%)
Frame = +1
Query: 895 PXPXXXRXPPXPXPTTXKXPPXPPPT 972
P P PP P P+ PP PPP+
Sbjct: 1190 PVPPPSEAPPVPKPSVG-VPPVPPPS 1214
Score = 26.6 bits (56), Expect = 5.3
Identities = 11/32 (34%), Positives = 12/32 (37%)
Frame = +2
Query: 872 AGCPXPXPPXPPXXGRXPXPPPPXXXNPPPPP 967
+G P PP P P P P P P P
Sbjct: 1057 SGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAP 1088
Score = 26.2 bits (55), Expect = 7.0
Identities = 14/31 (45%), Positives = 14/31 (45%), Gaps = 1/31 (3%)
Frame = +2
Query: 881 PXPXPPXP-PXXGRXPXPPPPXXXNPPPPPP 970
P PP P P G P PPP PP P P
Sbjct: 1194 PSEAPPVPKPSVGVPPVPPP--STAPPVPTP 1222
Score = 25.8 bits (54), Expect = 9.3
Identities = 11/30 (36%), Positives = 11/30 (36%)
Frame = +2
Query: 881 PXPXPPXPPXXGRXPXPPPPXXXNPPPPPP 970
P PP P P P P PP P P
Sbjct: 1213 PSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 27.5 bits (58), Expect = 3.0
Identities = 13/33 (39%), Positives = 13/33 (39%), Gaps = 2/33 (6%)
Frame = +2
Query: 881 PXPXPPXP--PXXGRXPXPPPPXXXNPPPPPPP 973
P P P P P G P P P P P PP
Sbjct: 108 PLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPP 140
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 27.1 bits (57), Expect = 4.0
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +2
Query: 905 PXXGRXPXPPPPXXXNPPPPPPP 973
P G P P + PPPPPP
Sbjct: 339 PFAGNQVMPTPQVQGSRPPPPPP 361
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 26.6 bits (56), Expect = 5.3
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +2
Query: 881 PXPXPPXPPXXGRXPXPPPPXXXNPPPPPPP 973
P P P P + PPPP + P PP
Sbjct: 729 PAPPTPAPTPAVKHHPPPPPVRSSISPSMPP 759
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 23.8 bits (49), Expect(2) = 6.3
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 685 PPPPPPP 705
PPPPPPP
Sbjct: 1095 PPPPPPP 1101
Score = 20.6 bits (41), Expect(2) = 6.3
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +1
Query: 769 PXPPPPP 789
P PPPPP
Sbjct: 1096 PPPPPPP 1102
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 23.8 bits (49), Expect(2) = 6.8
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 685 PPPPPPP 705
PPPPPPP
Sbjct: 306 PPPPPPP 312
Score = 20.6 bits (41), Expect(2) = 6.8
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +1
Query: 769 PXPPPPP 789
P PPPPP
Sbjct: 308 PPPPPPP 314
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 22.2 bits (45), Expect(2) = 7.8
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +1
Query: 760 FXXPXPPPPP 789
F P PPPPP
Sbjct: 944 FPPPPPPPPP 953
Score = 21.8 bits (44), Expect(2) = 7.8
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +1
Query: 685 PPPPPPPXL 711
P PPPPP L
Sbjct: 905 PTPPPPPPL 913
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,120,730
Number of Sequences: 5004
Number of extensions: 31689
Number of successful extensions: 473
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 67
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 314
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 501293686
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -