Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_M05
         (972 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.            25   0.64 
AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubu...    25   4.5  
AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative different...    24   6.0  

>DQ655702-1|ABG45862.1|  889|Anopheles gambiae Jxc1 protein.
          Length = 889

 Score = 25.0 bits (52), Expect = 3.4
 Identities = 19/85 (22%), Positives = 20/85 (23%)
 Frame = +2

Query: 536 PPPPPRXGGXXFXFXXXXXXXXXRXKKTXXXPXXXGGGGPXPXXPXARXXXXXXXXXXXX 715
           PPPPP  GG                 +    P            P               
Sbjct: 530 PPPPPPPGGAVLNIPPQFLPPPLNLLRAPFFPLNPAQLRFPAGFPNLPNAQPPPAPPPPP 589

Query: 716 GGXPPXXXXFXGXXGXPXGGRPPPP 790
              PP      G  G P G RPP P
Sbjct: 590 PMGPPPSPLAGGPLGGPAGSRPPLP 614



 Score = 23.8 bits (49), Expect(2) = 0.64
 Identities = 11/26 (42%), Positives = 12/26 (46%), Gaps = 2/26 (7%)
 Frame = +2

Query: 725 PPXXXXFXGXX--GXPXGGRPPPPXG 796
           PP    + G    G P G  PPPP G
Sbjct: 512 PPHGAGYDGRDLTGGPLGPPPPPPPG 537



 Score = 21.8 bits (44), Expect(2) = 0.64
 Identities = 9/22 (40%), Positives = 9/22 (40%)
 Frame = +2

Query: 890 GGPPPPXXXTKXXPXPPXXNPP 955
           G PPPP         PP   PP
Sbjct: 529 GPPPPPPPGGAVLNIPPQFLPP 550


>AJ438610-1|CAD27473.1|  838|Anopheles gambiae putative microtubule
           binding protein protein.
          Length = 838

 Score = 24.6 bits (51), Expect = 4.5
 Identities = 15/46 (32%), Positives = 15/46 (32%)
 Frame = -1

Query: 777 RPPXGXPXXPXKXXXXGGXPPXXGGGAXXXPPPRAXGXXGXGPPPP 640
           RP  G P  P      G   P   G      PPR  G     P PP
Sbjct: 180 RPNPGMPPGPQMMRPPGNVGPPRTGTPTQPQPPRPGGMY---PQPP 222



 Score = 24.6 bits (51), Expect = 4.5
 Identities = 20/65 (30%), Positives = 20/65 (30%), Gaps = 4/65 (6%)
 Frame = -1

Query: 810 PXXXXPXGGGGRPPXGXPXXPXKXXXXGGXPPXXGGGAXXXP--PPRAXG--XXGXGPPP 643
           P    P G  G P  G P  P      G  P   G      P  PP A      G  P P
Sbjct: 189 PQMMRPPGNVGPPRTGTPTQPQPPRPGGMYPQPPGVPMPMRPQMPPGAVPGMQPGMQPRP 248

Query: 642 PXXXG 628
           P   G
Sbjct: 249 PSAQG 253


>AJ439398-8|CAD28131.1| 1283|Anopheles gambiae putative
           differentiation regulator protein.
          Length = 1283

 Score = 24.2 bits (50), Expect = 6.0
 Identities = 10/24 (41%), Positives = 11/24 (45%)
 Frame = -1

Query: 729 GGXPPXXGGGAXXXPPPRAXGXXG 658
           GG  P  GGG+   P P   G  G
Sbjct: 208 GGGAPGGGGGSSGGPGPGGGGGGG 231


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 571,851
Number of Sequences: 2352
Number of extensions: 11017
Number of successful extensions: 42
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 39
length of database: 563,979
effective HSP length: 65
effective length of database: 411,099
effective search space used: 106063542
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)