BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_M03
(926 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 25 2.5
X95912-1|CAA65156.1| 696|Anopheles gambiae immune factor protein. 24 7.5
>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
chain protein.
Length = 1024
Score = 25.4 bits (53), Expect = 2.5
Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Frame = -3
Query: 747 GARGXXRGXGEAG-RGXPKXXXPAVFPGGXGXSSVEGQXKNLP 622
G G G+ G +G P PA PG G V+G K LP
Sbjct: 146 GTPGPPGYPGDVGPKGEPGPKGPAGHPGAPGRPGVDG-VKGLP 187
>X95912-1|CAA65156.1| 696|Anopheles gambiae immune factor protein.
Length = 696
Score = 23.8 bits (49), Expect = 7.5
Identities = 11/31 (35%), Positives = 13/31 (41%)
Frame = +2
Query: 299 KNXXIXPQQTXQNPXNPXTXXQVPXXXGSPL 391
+N PQ QNP N +P G PL
Sbjct: 532 QNGPSQPQPQQQNPFNLLNFGTLPLATGDPL 562
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 561,234
Number of Sequences: 2352
Number of extensions: 7839
Number of successful extensions: 6
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 6
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 6
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 100882044
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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