Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_M03
         (926 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT022850-1|AAY55266.1|  538|Drosophila melanogaster IP13040p pro...    30   3.9  
AE013599-1243|AAF58688.1|  610|Drosophila melanogaster CG13214-P...    30   3.9  
AY084125-1|AAL89863.1|  302|Drosophila melanogaster RE20575p pro...    29   6.8  
AE014296-197|AAF47457.1|  311|Drosophila melanogaster CG9192-PA ...    29   6.8  

>BT022850-1|AAY55266.1|  538|Drosophila melanogaster IP13040p
           protein.
          Length = 538

 Score = 30.3 bits (65), Expect = 3.9
 Identities = 16/49 (32%), Positives = 16/49 (32%)
 Frame = -3

Query: 786 GEPGXGXXXGXXAGARGXXRGXGEAGRGXPKXXXPAVFPGGXGXSSVEG 640
           G PG G   G      G   G G  G G P        PGG G     G
Sbjct: 325 GSPGGGGYGGQGGAGGGYGGGGGRGGGGAPGAPGAPGSPGGGGFGGQGG 373


>AE013599-1243|AAF58688.1|  610|Drosophila melanogaster CG13214-PA,
           isoform A protein.
          Length = 610

 Score = 30.3 bits (65), Expect = 3.9
 Identities = 16/49 (32%), Positives = 16/49 (32%)
 Frame = -3

Query: 786 GEPGXGXXXGXXAGARGXXRGXGEAGRGXPKXXXPAVFPGGXGXSSVEG 640
           G PG G   G      G   G G  G G P        PGG G     G
Sbjct: 397 GSPGGGGYGGQGGAGGGYGGGGGRGGGGAPGAPGAPGSPGGGGFGGQGG 445


>AY084125-1|AAL89863.1|  302|Drosophila melanogaster RE20575p
           protein.
          Length = 302

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 14/40 (35%), Positives = 16/40 (40%)
 Frame = -3

Query: 783 EPGXGXXXGXXAGARGXXRGXGEAGRGXPKXXXPAVFPGG 664
           +PG G   G   G  G   G G  G+G P    P    GG
Sbjct: 144 QPGYGGFSGAQNGISGYPGGYGGVGQGLPGAGFPGASVGG 183


>AE014296-197|AAF47457.1|  311|Drosophila melanogaster CG9192-PA
           protein.
          Length = 311

 Score = 29.5 bits (63), Expect = 6.8
 Identities = 14/40 (35%), Positives = 16/40 (40%)
 Frame = -3

Query: 783 EPGXGXXXGXXAGARGXXRGXGEAGRGXPKXXXPAVFPGG 664
           +PG G   G   G  G   G G  G+G P    P    GG
Sbjct: 144 QPGYGGFSGAQNGISGYPGGYGGVGQGLPGAGFPGASVGG 183


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 25,761,821
Number of Sequences: 53049
Number of extensions: 404521
Number of successful extensions: 662
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 492
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 649
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4566862269
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)