Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_M01
         (812 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY061421-1|AAL28969.1|  300|Drosophila melanogaster LD35248p pro...    29   7.6  
AF182826-1|AAF01031.1|  300|Drosophila melanogaster cyclophilin-...    29   7.6  
AE013599-2502|AAF57839.1|  300|Drosophila melanogaster CG4886-PA...    29   7.6  

>AY061421-1|AAL28969.1|  300|Drosophila melanogaster LD35248p
           protein.
          Length = 300

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +1

Query: 265 NDDGLFGKAGYNREIFNDDRGKLTGQAYGTRVLGPGGDSTN 387
           N++G  GK+ Y ++ FND+   L   ++GT  +   G +TN
Sbjct: 204 NNNGTGGKSIYGKK-FNDENFNLKHNSFGTLSMANSGANTN 243


>AF182826-1|AAF01031.1|  300|Drosophila melanogaster cyclophilin-33
           protein.
          Length = 300

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +1

Query: 265 NDDGLFGKAGYNREIFNDDRGKLTGQAYGTRVLGPGGDSTN 387
           N++G  GK+ Y ++ FND+   L   ++GT  +   G +TN
Sbjct: 204 NNNGTGGKSIYGKK-FNDENFNLKHNSFGTLSMANSGANTN 243


>AE013599-2502|AAF57839.1|  300|Drosophila melanogaster CG4886-PA
           protein.
          Length = 300

 Score = 29.1 bits (62), Expect = 7.6
 Identities = 14/41 (34%), Positives = 24/41 (58%)
 Frame = +1

Query: 265 NDDGLFGKAGYNREIFNDDRGKLTGQAYGTRVLGPGGDSTN 387
           N++G  GK+ Y ++ FND+   L   ++GT  +   G +TN
Sbjct: 204 NNNGTGGKSIYGKK-FNDENFNLKHNSFGTLSMANSGANTN 243


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 30,505,761
Number of Sequences: 53049
Number of extensions: 629760
Number of successful extensions: 1335
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 1301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1335
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 3818998872
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)