Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_L24
(986 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 39 0.001
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 36 0.012
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 33 0.082
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 32 0.14
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 32 0.14
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 31 0.19
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 31 0.33
SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces... 27 3.1
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 27 3.1
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 27 4.1
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 5.4
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 26 9.4
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 26 9.4
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 38.7 bits (86), Expect = 0.001
Identities = 31/134 (23%), Positives = 36/134 (26%), Gaps = 2/134 (1%)
Frame = +2
Query: 533 SPHQPXS--PPTXLXXXKPPHFXHXXXXTXKXXXPXXXPPSPPHXRXXXXXXXXXXXXNX 706
SP P + PP K P P PP P +
Sbjct: 1003 SPAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSA 1062
Query: 707 PXPXPXRLXXXPXXXSXXXAPXXPPXSXXAXXPNSPIAXXPHXXPXLPPPXXPHPXMXAP 886
P P P P + AP P S P +A P P + P P P P
Sbjct: 1063 PPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPP 1122
Query: 887 XPPXXXRMPPXXPP 928
P PP P
Sbjct: 1123 VPKPSVAAPPVPVP 1136
Score = 34.7 bits (76), Expect = 0.020
Identities = 22/79 (27%), Positives = 23/79 (29%)
Frame = +2
Query: 713 PXPXRLXXXPXXXSXXXAPXXPPXSXXAXXPNSPIAXXPHXXPXLPPPXXPHPXMXAPXP 892
P P P AP P S P +A P P P P P P
Sbjct: 1132 PVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPV 1191
Query: 893 PXXXRMPPXXPPPLXSYPP 949
P PP P P PP
Sbjct: 1192 PPPSEAPP-VPKPSVGVPP 1209
Score = 34.3 bits (75), Expect = 0.027
Identities = 24/81 (29%), Positives = 28/81 (34%)
Frame = +2
Query: 707 PXPXPXRLXXXPXXXSXXXAPXXPPXSXXAXXPNSPIAXXPHXXPXLPPPXXPHPXMXAP 886
P P P + P P P S P +A P P PP P P + AP
Sbjct: 1093 PVPKPS-VAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPV-PKPSVAAP 1150
Query: 887 XPPXXXRMPPXXPPPLXSYPP 949
P PP P P + PP
Sbjct: 1151 PVPAPSGAPP-VPKPSVAAPP 1170
Score = 34.3 bits (75), Expect = 0.027
Identities = 22/79 (27%), Positives = 23/79 (29%)
Frame = +2
Query: 713 PXPXRLXXXPXXXSXXXAPXXPPXSXXAXXPNSPIAXXPHXXPXLPPPXXPHPXMXAPXP 892
P P P AP P S P A P P P P P + P
Sbjct: 1151 PVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPV 1210
Query: 893 PXXXRMPPXXPPPLXSYPP 949
P PP P P PP
Sbjct: 1211 PPPSTAPP-VPTPSAGLPP 1228
Score = 33.1 bits (72), Expect = 0.062
Identities = 22/79 (27%), Positives = 24/79 (30%)
Frame = +2
Query: 713 PXPXRLXXXPXXXSXXXAPXXPPXSXXAXXPNSPIAXXPHXXPXLPPPXXPHPXMXAPXP 892
P P P + AP P S A P P P + P P P P P
Sbjct: 1103 PVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVP 1162
Query: 893 PXXXRMPPXXPPPLXSYPP 949
PP P P PP
Sbjct: 1163 KPSVAAPP-VPAPSSGIPP 1180
Score = 33.1 bits (72), Expect = 0.062
Identities = 21/78 (26%), Positives = 24/78 (30%)
Frame = +2
Query: 713 PXPXRLXXXPXXXSXXXAPXXPPXSXXAXXPNSPIAXXPHXXPXLPPPXXPHPXMXAPXP 892
P P P AP P S A +P P P + P P P P
Sbjct: 1122 PVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPV 1181
Query: 893 PXXXRMPPXXPPPLXSYP 946
P P PPP + P
Sbjct: 1182 PKPAAGVPPVPPPSEAPP 1199
Score = 32.7 bits (71), Expect = 0.082
Identities = 24/80 (30%), Positives = 27/80 (33%), Gaps = 1/80 (1%)
Frame = +2
Query: 713 PXPXRLXXXPXXXSXXXAPXXPPXSXXAXXPNSPIAXXPHXXPXLPPPXXPHPXMXAPX- 889
P P P AP P S P +A P P PP P P + AP
Sbjct: 1113 PVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPV-PKPSVAAPPV 1171
Query: 890 PPXXXRMPPXXPPPLXSYPP 949
P +PP P P PP
Sbjct: 1172 PAPSSGIPP-VPKPAAGVPP 1190
Score = 31.1 bits (67), Expect = 0.25
Identities = 21/80 (26%), Positives = 22/80 (27%)
Frame = +2
Query: 707 PXPXPXRLXXXPXXXSXXXAPXXPPXSXXAXXPNSPIAXXPHXXPXLPPPXXPHPXMXAP 886
P P P P P PP S P + P P PP P P P
Sbjct: 1170 PVPAPSS-GIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPV-PTPSAGLP 1227
Query: 887 XPPXXXRMPPXXPPPLXSYP 946
P P P P P
Sbjct: 1228 PVPVPTAKAPPVPAPSSEAP 1247
Score = 29.5 bits (63), Expect = 0.76
Identities = 21/96 (21%), Positives = 25/96 (26%)
Frame = +2
Query: 641 PPSPPHXRXXXXXXXXXXXXNXPXPXPXRLXXXPXXXSXXXAPXXPPXSXXAXXPNSPIA 820
P +PP + P P P AP P S +P
Sbjct: 1060 PSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSG 1119
Query: 821 XXPHXXPXLPPPXXPHPXMXAPXPPXXXRMPPXXPP 928
P P + P P P P P PP P
Sbjct: 1120 APPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAP 1155
Score = 28.3 bits (60), Expect = 1.8
Identities = 21/81 (25%), Positives = 24/81 (29%)
Frame = +2
Query: 707 PXPXPXRLXXXPXXXSXXXAPXXPPXSXXAXXPNSPIAXXPHXXPXLPPPXXPHPXMXAP 886
P P P S P P + P P P P + P P P P
Sbjct: 1160 PVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVP-PPSEAPPVPKPSVGVPPVPPPSTAPP 1218
Query: 887 XPPXXXRMPPXXPPPLXSYPP 949
P +PP P P PP
Sbjct: 1219 VPTPSAGLPP-VPVPTAKAPP 1238
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 35.5 bits (78), Expect = 0.012
Identities = 25/94 (26%), Positives = 29/94 (30%), Gaps = 1/94 (1%)
Frame = +2
Query: 707 PXPXPXRLXXXPXXXSXXXAPXXPPXSXXAXXPNSPIAXX-PHXXPXLPPPXXPHPXMXA 883
P P P P + PP A + P A P P +PP P P A
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQA 209
Query: 884 PXPPXXXRMPPXXPPPLXSYPPXXXXRPRXXXRG 985
P R P PP P P+ RG
Sbjct: 210 PVANTSSR-PSSFAPPAGHAPNVTSESPKFPNRG 242
Score = 33.9 bits (74), Expect = 0.035
Identities = 19/59 (32%), Positives = 22/59 (37%)
Frame = +3
Query: 774 PPPXPXKXPXQTLX*PLPPTXXPXSPPXXXPTPX*XPPXPX*XPXCPLDXPXPSXRIPP 950
PP P Q+ PPT P P P+P PP P P P P P+ P
Sbjct: 124 PPSAPAPPTPQSEL--RPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAP 180
Score = 31.9 bits (69), Expect = 0.14
Identities = 23/66 (34%), Positives = 26/66 (39%), Gaps = 5/66 (7%)
Frame = +2
Query: 767 PXXPPXSXXAXXPNSPIAXXPHXXPXLPPPXXPHPXMXAPX-----PPXXXRMPPXXPPP 931
P PP S A P P + P LPPP P + +P P MPP PPP
Sbjct: 147 PSIPPPSP-ASAPPIP-SKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPP 204
Query: 932 LXSYPP 949
S P
Sbjct: 205 PLSQAP 210
Score = 30.3 bits (65), Expect = 0.44
Identities = 16/55 (29%), Positives = 20/55 (36%)
Frame = +2
Query: 785 SXXAXXPNSPIAXXPHXXPXLPPPXXPHPXMXAPXPPXXXRMPPXXPPPLXSYPP 949
S A P++P P P P P + P P +P PP S PP
Sbjct: 119 SASAAPPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPP 173
Score = 29.5 bits (63), Expect = 0.76
Identities = 20/65 (30%), Positives = 23/65 (35%)
Frame = +3
Query: 756 SXPLPXPPPXPXKXPXQTLX*PLPPTXXPXSPPXXXPTPX*XPPXPX*XPXCPLDXPXPS 935
S P P P + P P P+ P SP P P PP P P P P
Sbjct: 126 SAPAPPTPQSELRPPTSA---PPRPSIPPPSPASAPPIPSKAPPIPSSLP--PPAQPAAP 180
Query: 936 XRIPP 950
+ PP
Sbjct: 181 VKSPP 185
Score = 27.5 bits (58), Expect = 3.1
Identities = 30/141 (21%), Positives = 39/141 (27%), Gaps = 2/141 (1%)
Frame = +2
Query: 533 SPHQPXSPPTXLXXXKPPHFXHXXXXTXKXXXPXXXPPSPPHXRXXXXXXXXXXXXNXPX 712
+P +PPT +PP T P PPSP P
Sbjct: 123 APPSAPAPPTPQSELRPP--------TSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPP 174
Query: 713 PXPXR-LXXXPXXXSXXXA-PXXPPXSXXAXXPNSPIAXXPHXXPXLPPPXXPHPXMXAP 886
P + P S A P PP +P+A PP P + +
Sbjct: 175 AQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPPAGHAPNVTSE 234
Query: 887 XPPXXXRMPPXXPPPLXSYPP 949
P R P + PP
Sbjct: 235 SPKFPNRGPSIPSASVPPVPP 255
Score = 26.6 bits (56), Expect = 5.4
Identities = 12/39 (30%), Positives = 17/39 (43%)
Frame = -2
Query: 295 PAFPKSPXSFCPKVPKTLPPPICLSQVTSXRVSP*GLPP 179
P+ P P + P PK PPP+ + V + P P
Sbjct: 185 PSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAP 223
Score = 25.8 bits (54), Expect = 9.4
Identities = 20/68 (29%), Positives = 27/68 (39%), Gaps = 7/68 (10%)
Frame = +2
Query: 764 APXXPPXSXXAXXPNS----PIAXXPHXXPXLPPPXXPH-PXMXAPXPPXXXRMPPXXPP 928
A PP + P S P + P P +PPP P + + PP +PP P
Sbjct: 120 ASAAPPSAPAPPTPQSELRPPTSAPPR--PSIPPPSPASAPPIPSKAPPIPSSLPPPAQP 177
Query: 929 --PLXSYP 946
P+ S P
Sbjct: 178 AAPVKSPP 185
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 32.7 bits (71), Expect = 0.082
Identities = 17/46 (36%), Positives = 18/46 (39%)
Frame = -3
Query: 948 GGYXWRGGGXXGGXRXXXGGXGAXXWGWGXXGGGRXGXXWGXXAXG 811
GG+ GG GG GG G G G GGG G G G
Sbjct: 224 GGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHG 269
Score = 29.9 bits (64), Expect = 0.58
Identities = 20/55 (36%), Positives = 21/55 (38%)
Frame = -2
Query: 931 GXGXSRGHXGXXWGXGGXHXGVGXXXGGEXGXXVGGXGYXRVWXGXXXGXGGGXG 767
G G G G GG H G G GG G G G + G G GGG G
Sbjct: 206 GFGGFGGFGGEGHHHGG-HGGFGGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPG 259
Score = 29.9 bits (64), Expect = 0.58
Identities = 13/33 (39%), Positives = 14/33 (42%)
Frame = -3
Query: 927 GGXXGGXRXXXGGXGAXXWGWGXXGGGRXGXXW 829
GG GG GG G G+G GG G W
Sbjct: 241 GGGPGGFGGGLGGFGGGPGGFGGGPGGHGGPGW 273
Score = 28.7 bits (61), Expect = 1.3
Identities = 23/62 (37%), Positives = 24/62 (38%), Gaps = 1/62 (1%)
Frame = -2
Query: 949 GGIRXEGXGXSRGHXGXXWGXGGXHXGVGXXXGGEXGXXVGG-XGYXRVWXGXXXGXGGG 773
GG EG GH G G GG G G GG GG G + G G GGG
Sbjct: 211 GGFGGEGHHHG-GHGGFGGGPGGFEGGPGGFGGG-----PGGFGGGLGGFGGGPGGFGGG 264
Query: 772 XG 767
G
Sbjct: 265 PG 266
Score = 28.3 bits (60), Expect = 1.8
Identities = 19/51 (37%), Positives = 19/51 (37%)
Frame = -2
Query: 913 GHXGXXWGXGGXHXGVGXXXGGEXGXXVGGXGYXRVWXGXXXGXGGGXGSG 761
G G G G H G G GG G GG G G G GG G G
Sbjct: 208 GGFGGFGGEGHHHGGHGGFGGGP-GGFEGGPGGFGGGPGGFGGGLGGFGGG 257
Score = 27.5 bits (58), Expect = 3.1
Identities = 23/75 (30%), Positives = 24/75 (32%), Gaps = 1/75 (1%)
Frame = -3
Query: 927 GGXXGGXRXXXGGXGAXXWGWGXXGG-GRXGXXWGXXAXGEFGXXAXXEXGGXXGAXXXX 751
GG GG GG G+G GG G G G G FG GG G
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHG--GHGGFGGGPGGFEGGPGGFGGGP 244
Query: 750 XXXGXXXXRXGXGXG 706
G G G G
Sbjct: 245 GGFGGGLGGFGGGPG 259
Score = 26.2 bits (55), Expect = 7.1
Identities = 24/74 (32%), Positives = 25/74 (33%), Gaps = 8/74 (10%)
Frame = -3
Query: 963 RXXXXGGYXWRGGGXXG--------GXRXXXGGXGAXXWGWGXXGGGRXGXXWGXXAXGE 808
R GG+ GGG G G GG G G G GGG G G G
Sbjct: 183 RGHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGG---PGG 239
Query: 807 FGXXAXXEXGGXXG 766
FG GG G
Sbjct: 240 FGGGPGGFGGGLGG 253
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 31.9 bits (69), Expect = 0.14
Identities = 23/74 (31%), Positives = 28/74 (37%), Gaps = 6/74 (8%)
Frame = +2
Query: 764 APXXPPXSXXAXXPNSPI----AXXPHXXPXLPPPXXPHPXMXAPXPPXXXRMPPXXP-- 925
AP PP + P+ + P P LPP P M AP P +PP P
Sbjct: 400 APALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPP---LPPSAPIA 456
Query: 926 PPLXSYPPXXXXRP 967
PPL + P P
Sbjct: 457 PPLPAGMPAAPPLP 470
Score = 31.5 bits (68), Expect = 0.19
Identities = 23/71 (32%), Positives = 28/71 (39%), Gaps = 3/71 (4%)
Frame = +3
Query: 765 LPXPPPXPXKXPXQTLX*PLPP---TXXPXSPPXXXPTPX*XPPXPX*XPXCPLDXPXPS 935
LP PPP P ++ PLPP + P PP P+ PP P + P P
Sbjct: 336 LPPPPPPPRSNAAGSI--PLPPQGRSAPPPPPPRSAPSTGRQPP-PLSSSRAVSNPPAPP 392
Query: 936 XRIPPXXXXAL 968
IP AL
Sbjct: 393 PAIPGRSAPAL 403
Score = 31.1 bits (67), Expect = 0.25
Identities = 32/136 (23%), Positives = 36/136 (26%), Gaps = 1/136 (0%)
Frame = +2
Query: 545 PXSPPTXLXXXKPPHFXHXXXXTXKXXXPXXXPPSPPHXRXXXXXXXXXXXXNXPXPXPX 724
P PP+ KPP PP PP + P P P
Sbjct: 313 PPPPPSRRNRGKPP------IGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Query: 725 RLXXXPXXXSXXXAPXXPPXSXXAXXPNSPIAXXPHXXPXLPPPXXPHPXMXAPXPPXXX 904
R S P S P +P P PP P P
Sbjct: 367 R-----SAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPP 421
Query: 905 RMPPXXPPPL-XSYPP 949
+PP PP L S PP
Sbjct: 422 SLPPSAPPSLPPSAPP 437
Score = 31.1 bits (67), Expect = 0.25
Identities = 30/124 (24%), Positives = 38/124 (30%), Gaps = 11/124 (8%)
Frame = +2
Query: 629 PXXXPP--SPPHXRXXXXXXXXXXXXNXPXPXPX----RLXXXPXXXSXXXAPXXPPXSX 790
P PP +P R N P P P P + P +
Sbjct: 361 PPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTP 420
Query: 791 XAXXPNSPIAXXPHXXPXLP---PPXXPHPXMXAPXPPXXXRMP--PXXPPPLXSYPPXX 955
+ P++P + P P LP P P P PP MP P PP + PP
Sbjct: 421 PSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Query: 956 XXRP 967
P
Sbjct: 481 APAP 484
Score = 30.3 bits (65), Expect = 0.44
Identities = 22/82 (26%), Positives = 23/82 (28%), Gaps = 2/82 (2%)
Frame = +2
Query: 707 PXPXPXRLXXXPXXXSXXXAPXXPPXSXXAXXPNSPIAXXPHXXPXLPPPXXPHPXMXA- 883
P P P + P PP PI PPP P
Sbjct: 291 PLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGS 350
Query: 884 -PXPPXXXRMPPXXPPPLXSYP 946
P PP PP PPP S P
Sbjct: 351 IPLPPQGRSAPP--PPPPRSAP 370
Score = 29.5 bits (63), Expect = 0.76
Identities = 21/69 (30%), Positives = 23/69 (33%)
Frame = +3
Query: 741 PXXXLSXPLPXPPPXPXKXPXQTLX*PLPPTXXPXSPPXXXPTPX*XPPXPX*XPXCPLD 920
P S P PP P P P P P +PP P PP P P P
Sbjct: 421 PSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPA-APPLPPAAP-APPP 478
Query: 921 XPXPSXRIP 947
P P+ P
Sbjct: 479 APAPAPAAP 487
Score = 29.1 bits (62), Expect = 1.0
Identities = 20/70 (28%), Positives = 21/70 (30%)
Frame = +3
Query: 762 PLPXPPPXPXKXPXQTLX*PLPPTXXPXSPPXXXPTPX*XPPXPX*XPXCPLDXPXPSXR 941
P+P PP P P P P P P P P P P P P P
Sbjct: 416 PVPTPPSLPPSAPPSLP--PSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAA 473
Query: 942 IPPXXXXALA 971
P A A
Sbjct: 474 PAPPPAPAPA 483
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 31.9 bits (69), Expect = 0.14
Identities = 19/61 (31%), Positives = 23/61 (37%), Gaps = 2/61 (3%)
Frame = +2
Query: 764 APXXPPXSXXAXXPNSPIAXXPHXXPXL--PPPXXPHPXMXAPXPPXXXRMPPXXPPPLX 937
+P PP + P P P + PPP P P + PP PP PPP
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPP-----PPPPPPPAV 785
Query: 938 S 940
S
Sbjct: 786 S 786
Score = 30.3 bits (65), Expect = 0.44
Identities = 15/49 (30%), Positives = 17/49 (34%)
Frame = +3
Query: 741 PXXXLSXPLPXPPPXPXKXPXQTLX*PLPPTXXPXSPPXXXPTPX*XPP 887
P + P P P P P P + P PP P P P PP
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 31.5 bits (68), Expect = 0.19
Identities = 20/55 (36%), Positives = 20/55 (36%), Gaps = 1/55 (1%)
Frame = -1
Query: 935 GGXGXVXGAXGXLXGVXGXSXGG-GXXXGGGGGXVCGGXXLXESLXGXLXGXGGG 774
GG G G G G G GG G GGG G GG G G GG
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGG 63
Score = 31.1 bits (67), Expect = 0.25
Identities = 20/56 (35%), Positives = 20/56 (35%), Gaps = 1/56 (1%)
Frame = -3
Query: 927 GGXXGGXRXXXGGXGAXXWG-WGXXGGGRXGXXWGXXAXGEFGXXAXXEXGGXXGA 763
GG GG GG G G G GGGR G G G GG GA
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGA 67
Score = 28.7 bits (61), Expect = 1.3
Identities = 17/47 (36%), Positives = 17/47 (36%)
Frame = -3
Query: 966 GRXXXXGGYXWRGGGXXGGXRXXXGGXGAXXWGWGXXGGGRXGXXWG 826
GR GG GGG G GG G G GGR G G
Sbjct: 17 GRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGG 63
Score = 26.2 bits (55), Expect = 7.1
Identities = 23/69 (33%), Positives = 24/69 (34%), Gaps = 1/69 (1%)
Frame = -3
Query: 966 GRXXXXGGYXWRGGGXXGGXRXXXGGXG-AXXWGWGXXGGGRXGXXWGXXAXGEFGXXAX 790
G GG GG GG GG G A G G GGR G A G G +
Sbjct: 6 GSRGGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGR---GGARGGRGGSSG 62
Query: 789 XEXGGXXGA 763
G GA
Sbjct: 63 GRGGAKGGA 71
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 30.7 bits (66), Expect = 0.33
Identities = 15/43 (34%), Positives = 17/43 (39%), Gaps = 3/43 (6%)
Frame = +2
Query: 812 PIAXXPHXXPXLPPPXXPHPXMXAPXPPXXXRM---PPXXPPP 931
P+ P + P P P M P PP M PP PPP
Sbjct: 1691 PVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 30.3 bits (65), Expect = 0.44
Identities = 19/62 (30%), Positives = 22/62 (35%)
Frame = +3
Query: 762 PLPXPPPXPXKXPXQTLX*PLPPTXXPXSPPXXXPTPX*XPPXPX*XPXCPLDXPXPSXR 941
P+ PP P + P PP PP P P PP P P P P P+
Sbjct: 1686 PVSTPPVRPQSAAPPQMSAPTPPP-----PPMSVPPPPSAPPMPAGPPSAP-PPPLPASS 1739
Query: 942 IP 947
P
Sbjct: 1740 AP 1741
Score = 29.5 bits (63), Expect = 0.76
Identities = 16/55 (29%), Positives = 20/55 (36%)
Frame = +2
Query: 803 PNSPIAXXPHXXPXLPPPXXPHPXMXAPXPPXXXRMPPXXPPPLXSYPPXXXXRP 967
P P++ P PP P P PP PP PP+ + PP P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAP---TPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 26.6 bits (56), Expect = 5.4
Identities = 13/38 (34%), Positives = 15/38 (39%)
Frame = +3
Query: 753 LSXPLPXPPPXPXKXPXQTLX*PLPPTXXPXSPPXXXP 866
+S P P PPP P P P P +PP P
Sbjct: 1702 MSAPTPPPPPMSVPPPPSA---PPMPAGPPSAPPPPLP 1736
>SPAC19D5.01 |pyp2||tyrosine phosphatase Pyp2|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 711
Score = 27.5 bits (58), Expect = 3.1
Identities = 14/31 (45%), Positives = 17/31 (54%), Gaps = 1/31 (3%)
Frame = -2
Query: 286 PKSPX-SFCPKVPKTLPPPICLSQVTSXRVS 197
P SP SF +VP +PPP+C V S S
Sbjct: 165 PISPDYSFPLRVPINIPPPLCTPSVVSDTFS 195
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 27.5 bits (58), Expect = 3.1
Identities = 15/41 (36%), Positives = 16/41 (39%)
Frame = -1
Query: 962 GXXGGGDTXGGXGXVXGAXGXLXGVXGXSXGGGXXXGGGGG 840
G G G G G G+ G G GGG G GGG
Sbjct: 133 GPAGRGGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGG 173
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 27.1 bits (57), Expect = 4.1
Identities = 20/63 (31%), Positives = 24/63 (38%), Gaps = 2/63 (3%)
Frame = +2
Query: 764 APXXPPXSXXAXXPNSPIAXXPHXXPXLP-PPXXPHPXMXAPXP-PXXXRMPPXXPPPLX 937
AP P S A P + A P +P P P+ M P P +PP P P
Sbjct: 483 APFIPGTS--APLPPTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVPPGMALPPGMPAPFP 540
Query: 938 SYP 946
YP
Sbjct: 541 GYP 543
Score = 26.6 bits (56), Expect = 5.4
Identities = 15/53 (28%), Positives = 19/53 (35%), Gaps = 1/53 (1%)
Frame = +2
Query: 776 PPXSXXAXXPNSPIAXXPHXXPXLP-PPXXPHPXMXAPXPPXXXRMPPXXPPP 931
PP PN ++ P P + PP P P P P +P PP
Sbjct: 506 PPIPGAPGMPNLNMSQPPMVPPGMALPPGMPAPFPGYPAVPAMPGIPGATAPP 558
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 26.6 bits (56), Expect = 5.4
Identities = 16/53 (30%), Positives = 18/53 (33%)
Frame = +2
Query: 809 SPIAXXPHXXPXLPPPXXPHPXMXAPXPPXXXRMPPXXPPPLXSYPPXXXXRP 967
SP+ P + P P P AP P PP PP S P P
Sbjct: 711 SPMGTGAVNSPAIKPQVTPAPPTPAPTPAVKHHPPP--PPVRSSISPSMPPAP 761
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 25.8 bits (54), Expect = 9.4
Identities = 12/40 (30%), Positives = 13/40 (32%)
Frame = +2
Query: 848 PPPXXPHPXMXAPXPPXXXRMPPXXPPPLXSYPPXXXXRP 967
PPP P P PP PPP + P P
Sbjct: 222 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP 261
Score = 25.8 bits (54), Expect = 9.4
Identities = 12/40 (30%), Positives = 13/40 (32%)
Frame = +2
Query: 848 PPPXXPHPXMXAPXPPXXXRMPPXXPPPLXSYPPXXXXRP 967
PPP P P PP PPP + P P
Sbjct: 235 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP 274
Score = 25.8 bits (54), Expect = 9.4
Identities = 12/40 (30%), Positives = 13/40 (32%)
Frame = +2
Query: 848 PPPXXPHPXMXAPXPPXXXRMPPXXPPPLXSYPPXXXXRP 967
PPP P P PP PPP + P P
Sbjct: 248 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP 287
Score = 25.8 bits (54), Expect = 9.4
Identities = 12/40 (30%), Positives = 13/40 (32%)
Frame = +2
Query: 848 PPPXXPHPXMXAPXPPXXXRMPPXXPPPLXSYPPXXXXRP 967
PPP P P PP PPP + P P
Sbjct: 261 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP 300
Score = 25.8 bits (54), Expect = 9.4
Identities = 12/40 (30%), Positives = 13/40 (32%)
Frame = +2
Query: 848 PPPXXPHPXMXAPXPPXXXRMPPXXPPPLXSYPPXXXXRP 967
PPP P P PP PPP + P P
Sbjct: 274 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP 313
Score = 25.8 bits (54), Expect = 9.4
Identities = 12/40 (30%), Positives = 13/40 (32%)
Frame = +2
Query: 848 PPPXXPHPXMXAPXPPXXXRMPPXXPPPLXSYPPXXXXRP 967
PPP P P PP PPP + P P
Sbjct: 287 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP 326
Score = 25.8 bits (54), Expect = 9.4
Identities = 12/40 (30%), Positives = 13/40 (32%)
Frame = +2
Query: 848 PPPXXPHPXMXAPXPPXXXRMPPXXPPPLXSYPPXXXXRP 967
PPP P P PP PPP + P P
Sbjct: 300 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPP 339
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 25.8 bits (54), Expect = 9.4
Identities = 15/44 (34%), Positives = 17/44 (38%), Gaps = 2/44 (4%)
Frame = +2
Query: 806 NSPIAXXPHXXPXLPPPXXPHPXMXAPXP--PXXXRMPPXXPPP 931
N+P P+ PPP P AP P PP PPP
Sbjct: 154 NAPTVSAPNSMVS-PPPSFQPPSAAAPATSLPSDYNPPPPPPPP 196
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,326,581
Number of Sequences: 5004
Number of extensions: 35887
Number of successful extensions: 242
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 73
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 169
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 509282430
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -