Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_L23
(917 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P42766 Cluster: 60S ribosomal protein L35; n=81; Eukary... 138 2e-31
UniRef50_P34662 Cluster: 60S ribosomal protein L35; n=33; Eukary... 108 2e-22
UniRef50_Q4WT53 Cluster: 60S ribosomal protein L35; n=5; cellula... 104 3e-21
UniRef50_Q4UIF8 Cluster: 60S ribosomal protein L35; n=6; Alveola... 86 1e-15
UniRef50_Q4PGL7 Cluster: Putative uncharacterized protein; n=1; ... 82 2e-14
UniRef50_Q9U935 Cluster: Ag15 protein; n=7; Alveolata|Rep: Ag15 ... 81 4e-14
UniRef50_Q5CJ48 Cluster: 60S ribosomal protein L35; n=2; Cryptos... 80 9e-14
UniRef50_Q4Q8V7 Cluster: 60S ribosomal protein L35, putative; n=... 77 6e-13
UniRef50_A0DBI8 Cluster: Chromosome undetermined scaffold_44, wh... 74 4e-12
UniRef50_UPI00002376D7 Cluster: PREDICTED: similar to 60S riboso... 60 8e-08
UniRef50_Q7QRA8 Cluster: GLP_2_9191_9649; n=2; Giardia intestina... 58 2e-07
UniRef50_Q0D991 Cluster: Os06g0732000 protein; n=9; Oryza sativa... 52 3e-05
UniRef50_A2E6R2 Cluster: Ribosomal protein L29, putative; n=4; T... 50 8e-05
UniRef50_Q8ST62 Cluster: Similarity to 60S ribosomal protein L35... 47 8e-04
UniRef50_Q019M2 Cluster: DNAJ_NEIMB Chaperone protein dnaJ sp|P6... 46 0.001
UniRef50_Q2KL02 Cluster: 60S ribosomal protein L35; n=1; Siniper... 44 0.007
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 40 0.067
UniRef50_Q9UXG6 Cluster: Putative uncharacterized protein ORF-c4... 38 0.36
UniRef50_UPI0000EBD742 Cluster: PREDICTED: similar to 60S riboso... 37 0.63
UniRef50_A0D1A4 Cluster: Chromosome undetermined scaffold_34, wh... 35 3.3
UniRef50_A5BMW0 Cluster: Putative uncharacterized protein; n=1; ... 33 7.7
>UniRef50_P42766 Cluster: 60S ribosomal protein L35; n=81;
Eukaryota|Rep: 60S ribosomal protein L35 - Homo sapiens
(Human)
Length = 123
Score = 138 bits (334), Expect = 2e-31
Identities = 72/123 (58%), Positives = 83/123 (67%)
Frame = +3
Query: 93 MGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 272
M K+K +LR K + LRVAKVTGG ASKLSKIRVVRK+IARV V
Sbjct: 1 MAKIKARDLRGKKKEELLKQLDDLKVELSQLRVAKVTGGAASKLSKIRVVRKSIARVLTV 60
Query: 273 YHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYA 452
+Q K NLR YK KKYKPLDLR KKTRAMR+ L KHE +KT+K+ RK+ L+P R YA
Sbjct: 61 INQTQKENLRKFYKGKKYKPLDLRPKKTRAMRRRLNKHEENLKTKKQQRKERLYPLRKYA 120
Query: 453 VKA 461
VKA
Sbjct: 121 VKA 123
>UniRef50_P34662 Cluster: 60S ribosomal protein L35; n=33;
Eukaryota|Rep: 60S ribosomal protein L35 -
Caenorhabditis elegans
Length = 123
Score = 108 bits (259), Expect = 2e-22
Identities = 59/123 (47%), Positives = 73/123 (59%)
Frame = +3
Query: 93 MGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 272
M K+KC LR + LRV+KVTGG ASKLSKIRVVRK IAR+ V
Sbjct: 1 MTKLKCKSLRGEKKDALQKKLDEQKTELATLRVSKVTGGAASKLSKIRVVRKNIARLLTV 60
Query: 273 YHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYA 452
+Q K LR Y + KYKP+DLR KKTRA+R+ LT HE +++ K+ K R +A
Sbjct: 61 INQTQKQELRKFYADHKYKPIDLRLKKTRAIRRRLTAHELSLRSAKQQAKSRNQAVRKFA 120
Query: 453 VKA 461
VKA
Sbjct: 121 VKA 123
>UniRef50_Q4WT53 Cluster: 60S ribosomal protein L35; n=5; cellular
organisms|Rep: 60S ribosomal protein L35 - Aspergillus
fumigatus (Sartorya fumigata)
Length = 203
Score = 104 bits (250), Expect = 3e-21
Identities = 59/135 (43%), Positives = 75/135 (55%), Gaps = 2/135 (1%)
Frame = +3
Query: 60 VPFPKRT*PVKMG--KVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKI 233
+P T P M KVK +L K + LRV K+ G +SK +I
Sbjct: 51 IPVRHDTKPPTMSTSKVKAGQLWGKSKEELSKQLEELKTELSQLRVQKIAAGASSKTQRI 110
Query: 234 RVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKE 413
VRK+IARV V + + LR YKNKKY PLDLR + TRA+R+ LTKHEA +KT K+
Sbjct: 111 HDVRKSIARVLTVINANQRAQLRLFYKNKKYTPLDLRPRLTRALRRRLTKHEATLKTEKQ 170
Query: 414 IRKKSLFPPRVYAVK 458
+K+ FP R YAVK
Sbjct: 171 RKKEIHFPQRKYAVK 185
>UniRef50_Q4UIF8 Cluster: 60S ribosomal protein L35; n=6;
Alveolata|Rep: 60S ribosomal protein L35 - Theileria
annulata
Length = 142
Score = 86.2 bits (204), Expect = 1e-15
Identities = 50/121 (41%), Positives = 64/121 (52%)
Frame = +3
Query: 99 KVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYH 278
K++ ELR K RV+KVT SKLSKI +VRKA+A+V VY+
Sbjct: 22 KLRVFELRDKSDAELLKLLDDLKQELATFRVSKVTATGTSKLSKITLVRKAVAKVLTVYN 81
Query: 279 QKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVK 458
Q+ K R YK PL+LR K TRA RK LT + +KT KE ++ P R YA+
Sbjct: 82 QRKKEEARKKYKKLSKTPLNLRPKLTRAKRKGLTTKQLTMKTIKERKRAENLPKRKYALL 141
Query: 459 A 461
A
Sbjct: 142 A 142
>UniRef50_Q4PGL7 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 218
Score = 82.2 bits (194), Expect = 2e-14
Identities = 44/103 (42%), Positives = 60/103 (58%)
Frame = +3
Query: 102 VKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQ 281
VK EL++K NLRV KV GG +SK+ +I +RK IARV V +Q
Sbjct: 77 VKTFELQSKSKTDLTKQLEELKTELLNLRVQKVAGGSSSKILRINSLRKDIARVLTVMNQ 136
Query: 282 KMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRK 410
K + NLR YK K PLDLRAKKTRA+R+ L + +++++
Sbjct: 137 KQRANLREFYKGKSQIPLDLRAKKTRAIRRKLNQQRFAMRSQR 179
>UniRef50_Q9U935 Cluster: Ag15 protein; n=7; Alveolata|Rep: Ag15
protein - Plasmodium falciparum
Length = 124
Score = 81.0 bits (191), Expect = 4e-14
Identities = 49/121 (40%), Positives = 63/121 (52%)
Frame = +3
Query: 93 MGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 272
M VK ELRT + LR++K G A K SKI VRK +ARV V
Sbjct: 1 MSNVKAYELRTLKKKELLDKLDELKKELSGLRISKALGNSA-KNSKIHGVRKNVARVLTV 59
Query: 273 YHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYA 452
Y+QK K+ LR YKNKK+KP +LR K T+ R L+ + T ++ +K FP R Y
Sbjct: 60 YNQKRKMELRQLYKNKKFKPYNLRKKLTKNKRLQLSPKQKAAMTLRQKKKVQNFPQRKYL 119
Query: 453 V 455
V
Sbjct: 120 V 120
>UniRef50_Q5CJ48 Cluster: 60S ribosomal protein L35; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L35 -
Cryptosporidium hominis
Length = 126
Score = 79.8 bits (188), Expect = 9e-14
Identities = 43/94 (45%), Positives = 58/94 (61%)
Frame = +3
Query: 180 NLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTR 359
+LRV + TG +KLS+I VVRK IAR+ + Q+ +LR + K+ PLDLR K TR
Sbjct: 33 SLRVIQSTGTAPNKLSRINVVRKGIARILTILSQRNIKSLREKHAGSKFMPLDLRKKLTR 92
Query: 360 AMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 461
A R+ALT +AK T K +K FP R +A+ A
Sbjct: 93 AKRRALTPQQAKKMTVKASKKALNFPKRKFAIIA 126
>UniRef50_Q4Q8V7 Cluster: 60S ribosomal protein L35, putative; n=5;
Trypanosomatidae|Rep: 60S ribosomal protein L35,
putative - Leishmania major
Length = 127
Score = 77.0 bits (181), Expect = 6e-13
Identities = 44/122 (36%), Positives = 66/122 (54%), Gaps = 3/122 (2%)
Frame = +3
Query: 102 VKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQ 281
+K +LR K + LRV + TGG ++L +IR +RK+IAR+ V +Q
Sbjct: 5 MKIKDLREKSKDDLLKTLTEYKKELSQLRVVQQTGGAETRLGRIRPIRKSIARILTVLNQ 64
Query: 282 KMKVNLRNHYKNKKYK---PLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYA 452
+ NL+ Y ++K + P LR K T R AL ++E KT +++R+ FP RVYA
Sbjct: 65 NERSNLKMFYADRKLRCKTPKVLRTKLTHRRRLALKENEKNRKTSRQMRQAHKFPKRVYA 124
Query: 453 VK 458
VK
Sbjct: 125 VK 126
>UniRef50_A0DBI8 Cluster: Chromosome undetermined scaffold_44, whole
genome shotgun sequence; n=9; Oligohymenophorea|Rep:
Chromosome undetermined scaffold_44, whole genome
shotgun sequence - Paramecium tetraurelia
Length = 125
Score = 74.1 bits (174), Expect = 4e-12
Identities = 41/120 (34%), Positives = 67/120 (55%)
Frame = +3
Query: 99 KVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIVYH 278
K K +LR + LR KV+ G A KL +I +VRK IA+ V +
Sbjct: 5 KFKVKKLREQKPEDLVKDLEKLKGELIQLRTVKVSAGNAQKLGRIGLVRKRIAKFLTVIN 64
Query: 279 QKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVK 458
++ + +++N K+ P+DLR KKTRA+R+ LT+ E KT+++ ++ + FP R +A+K
Sbjct: 65 EQRRNSVKNAAKSSTKLPVDLRGKKTRAIRQRLTRSERAQKTQRQWKRLNNFPLRKFALK 124
>UniRef50_UPI00002376D7 Cluster: PREDICTED: similar to 60S ribosomal
protein L35; n=1; Homo sapiens|Rep: PREDICTED: similar
to 60S ribosomal protein L35 - Homo sapiens
Length = 106
Score = 60.1 bits (139), Expect = 8e-08
Identities = 30/58 (51%), Positives = 38/58 (65%)
Frame = +3
Query: 288 KVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVKA 461
K NL YK KKYK L LR KKTRA+R+ L+KHE + +K+ + + L P R AVKA
Sbjct: 43 KENLGKFYKGKKYKHLHLRPKKTRAVRRPLSKHEENLTIKKQQQSEQLSPVRKCAVKA 100
>UniRef50_Q7QRA8 Cluster: GLP_2_9191_9649; n=2; Giardia
intestinalis|Rep: GLP_2_9191_9649 - Giardia lamblia ATCC
50803
Length = 152
Score = 58.4 bits (135), Expect = 2e-07
Identities = 32/94 (34%), Positives = 53/94 (56%), Gaps = 1/94 (1%)
Frame = +3
Query: 180 NLRVAKVTGG-VASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKT 356
+LR K T G V ++++ RV +K +ARV V +QK + R ++ ++ P R + T
Sbjct: 58 SLRTMKATAGPVPERIARFRVCKKDVARVLTVINQKARDEARAAFEGAEHIPKTFRPRLT 117
Query: 357 RAMRKALTKHEAKIKTRKEIRKKSLFPPRVYAVK 458
AMR LT+ + ++ K +++K FP YAVK
Sbjct: 118 HAMRCQLTEKQKRLLPSKLMKRKLQFPKLKYAVK 151
>UniRef50_Q0D991 Cluster: Os06g0732000 protein; n=9; Oryza
sativa|Rep: Os06g0732000 protein - Oryza sativa subsp.
japonica (Rice)
Length = 290
Score = 51.6 bits (118), Expect = 3e-05
Identities = 37/104 (35%), Positives = 50/104 (48%)
Frame = +3
Query: 87 VKMGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVY 266
V M ++K LR ++ + LRVA+VTGG +KLS I+ VR A+ Y
Sbjct: 106 VAMARIKVDVLRGRNKAELQAQLKDLKAELSVLRVARVTGGAPNKLSNIK-VRTALREAY 164
Query: 267 IVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKI 398
K K PLDLR KKT A+R+ LTKH+ +
Sbjct: 165 -------------KKKKKSLLPLDLRPKKTCAIRRRLTKHQGML 195
>UniRef50_A2E6R2 Cluster: Ribosomal protein L29, putative; n=4;
Trichomonas vaginalis G3|Rep: Ribosomal protein L29,
putative - Trichomonas vaginalis G3
Length = 124
Score = 50.0 bits (114), Expect = 8e-05
Identities = 35/124 (28%), Positives = 57/124 (45%), Gaps = 1/124 (0%)
Frame = +3
Query: 93 MGKVKCSELRTKDXXXXXXXXXXXXXXXTNLRVAKVTGGVASKLSKIRVVRKAIARVYIV 272
MG +K EL K L+ K A+KL++I+ R+ +ARV +
Sbjct: 1 MGHLKGKELIKKTRQELLDELAGLEKKLFELKGQKAASAAATKLTEIKNTRRDVARVKSI 60
Query: 273 YHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALT-KHEAKIKTRKEIRKKSLFPPRVY 449
+ L+ Y K P+DLR + +++R L K+ K+ ++ R K LF R +
Sbjct: 61 LMVSQRKALQEKYAKAKLVPIDLRKHQEKSLRNKLAPKYANKLTAQESRRHKCLF-ERKF 119
Query: 450 AVKA 461
A+KA
Sbjct: 120 ALKA 123
>UniRef50_Q8ST62 Cluster: Similarity to 60S ribosomal protein L35;
n=2; Encephalitozoon cuniculi|Rep: Similarity to 60S
ribosomal protein L35 - Encephalitozoon cuniculi
Length = 122
Score = 46.8 bits (106), Expect = 8e-04
Identities = 30/92 (32%), Positives = 49/92 (53%), Gaps = 2/92 (2%)
Frame = +3
Query: 183 LRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYK--PLDLRAKKT 356
LR K +G V + + I+ +K +AR V +K+ L Y+ P +LR K
Sbjct: 30 LRQKKNSGDVGA--NDIKTAKKNLARALTVRREKILEELVEAYRGTPVSKLPKELRPKLN 87
Query: 357 RAMRKALTKHEAKIKTRKEIRKKSLFPPRVYA 452
R+ R+ALTK + + KTR++ + S FP ++A
Sbjct: 88 RSKRRALTKTQLRRKTRRQRARMSKFPRVIFA 119
>UniRef50_Q019M2 Cluster: DNAJ_NEIMB Chaperone protein dnaJ
sp|P63968|DNAJ_NEIMA Chaperone protein dnaJ
gb|AAF40528.1| dna; n=2; Ostreococcus|Rep: DNAJ_NEIMB
Chaperone protein dnaJ sp|P63968|DNAJ_NEIMA Chaperone
protein dnaJ gb|AAF40528.1| dna - Ostreococcus tauri
Length = 575
Score = 46.0 bits (104), Expect = 0.001
Identities = 37/92 (40%), Positives = 41/92 (44%)
Frame = -2
Query: 460 ALTA*TLGGKRDFFLISFLVLIFASCLVRALRIARVFLALKSKGXXXXXXXXXXXXXXXF 281
AL+A GK F V S LV+A R+ARVF KS G
Sbjct: 394 ALSAYLRCGKAASFFAWRAVFAPFSDLVKARRMARVFFLRKSSGWYFAPSYADRKDANCL 453
Query: 280 W*YTM*TRAIAFLTTRILDSLEATPPVTLATR 185
W T+ AIA T IL SL PPVTLATR
Sbjct: 454 WRITVRVCAIANRTCLILLSLPGAPPVTLATR 485
>UniRef50_Q2KL02 Cluster: 60S ribosomal protein L35; n=1; Siniperca
chuatsi|Rep: 60S ribosomal protein L35 - Siniperca
chuatsi (Chinese perch)
Length = 57
Score = 43.6 bits (98), Expect = 0.007
Identities = 19/41 (46%), Positives = 28/41 (68%), Gaps = 1/41 (2%)
Frame = +3
Query: 327 KPLDLRAKKTRAMRKALTKHEAKIKTRKEIRKK-SLFPPRV 446
KPLDLR KKTR +R+ L KHE ++T+K ++ L P++
Sbjct: 1 KPLDLRPKKTRVLRRRLNKHEESLRTKKTAEERPPLLDPQI 41
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 40.3 bits (90), Expect = 0.067
Identities = 17/19 (89%), Positives = 17/19 (89%)
Frame = +2
Query: 554 DPDMIRYIDEFGQTXTXMQ 610
DPDMIRYIDEFGQT T MQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_Q9UXG6 Cluster: Putative uncharacterized protein
ORF-c40_015; n=1; Sulfolobus solfataricus|Rep: Putative
uncharacterized protein ORF-c40_015 - Sulfolobus
solfataricus
Length = 360
Score = 37.9 bits (84), Expect = 0.36
Identities = 25/78 (32%), Positives = 39/78 (50%), Gaps = 2/78 (2%)
Frame = +3
Query: 201 TGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKA-- 374
T G+ S L K ++ IV+ QK+K +L +Y+NK + K+R+ RKA
Sbjct: 183 TVGLNSMLHKFELIYTIDPDYIIVFDQKIKDSLPENYRNKAILLKSVNLHKSRSERKANR 242
Query: 375 LTKHEAKIKTRKEIRKKS 428
+ K+E K K I+ S
Sbjct: 243 IAKYERYFKEAKNIKTLS 260
>UniRef50_UPI0000EBD742 Cluster: PREDICTED: similar to 60S ribosomal
protein L35; n=1; Bos taurus|Rep: PREDICTED: similar to
60S ribosomal protein L35 - Bos taurus
Length = 98
Score = 37.1 bits (82), Expect = 0.63
Identities = 25/58 (43%), Positives = 32/58 (55%)
Frame = +3
Query: 183 LRVAKVTGGVASKLSKIRVVRKAIARVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKT 356
L + K+T V+SK SKI V K I+R+ V +Q K NLR KYKPL + T
Sbjct: 17 LGIIKMTSSVSSKPSKILGVCKFISRLLTVVNQTQKENLR------KYKPLQSKKAHT 68
>UniRef50_A0D1A4 Cluster: Chromosome undetermined scaffold_34, whole
genome shotgun sequence; n=1; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_34,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 485
Score = 34.7 bits (76), Expect = 3.3
Identities = 18/52 (34%), Positives = 28/52 (53%)
Frame = +3
Query: 258 RVYIVYHQKMKVNLRNHYKNKKYKPLDLRAKKTRAMRKALTKHEAKIKTRKE 413
R Y++ +Q + + L N YKN+K +R+ K +K K KIK RK+
Sbjct: 280 RNYLIQNQIIILQLSNSYKNRKLSKKKIRSLKKSKKKKFKLKSILKIKKRKK 331
>UniRef50_A5BMW0 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 185
Score = 33.5 bits (73), Expect = 7.7
Identities = 20/70 (28%), Positives = 36/70 (51%), Gaps = 1/70 (1%)
Frame = +3
Query: 219 KLSKIRVVRKAIARVYIVYHQKMKVNLRNHYK-NKKYKPLDLRAKKTRAMRKALTKHEAK 395
+L K + +K + Y+ QK ++ R K NK+ K L + +K + K K + +
Sbjct: 110 QLKKKKKKKKKQKKQYLEKKQKKQLKKRKKKKKNKQNKQLTKKLRKQKMKNKKXKKQKKQ 169
Query: 396 IKTRKEIRKK 425
K RK+++KK
Sbjct: 170 RKQRKQLKKK 179
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 636,417,719
Number of Sequences: 1657284
Number of extensions: 9456523
Number of successful extensions: 27229
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 22066
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 26280
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 84031265255
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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