Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_L22
(1046 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 50 7e-07
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 42 2e-04
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 37 0.005
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 37 0.005
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 34 0.029
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 33 0.088
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 32 0.15
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 31 0.27
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 31 0.27
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 29 1.1
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 29 1.4
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 25 1.6
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 28 2.5
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 28 2.5
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 24 4.0
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 26 5.7
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 27 5.8
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 49.6 bits (113), Expect = 7e-07
Identities = 45/182 (24%), Positives = 48/182 (26%), Gaps = 4/182 (2%)
Frame = +1
Query: 505 PPPPPPXXK---KKXXGGGXKXXKXPPPXGGGPXXXXXXXXXXXXXGXAPPPPPPQXXXK 675
PPPPPP + K G G PPP APPPPPP+
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPS 371
Query: 676 XPPPPXXFFFXXXXKKXGGPPXXXXXXXXPXXXPXXPPXXXXPPPX-SPXXXXXXXGRGP 852
P PP P P PP +P
Sbjct: 372 TGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSL 431
Query: 853 PPXXSXXXPXXXPXXXXXXXXXXXPPXXXXPPXPPPXXXXPPXXXPPXXXXPPPXXPPXP 1032
PP P P P PP P PP PP PPP P P
Sbjct: 432 PPSAPPSLPMGAPAAPPLP-----PSAPIAPPLPAGMPAAPPL--PPAAPAPPPA--PAP 482
Query: 1033 PP 1038
P
Sbjct: 483 AP 484
Score = 41.1 bits (92), Expect = 3e-04
Identities = 43/181 (23%), Positives = 46/181 (25%), Gaps = 4/181 (2%)
Frame = +1
Query: 505 PPPPPPXXKKKXXG--GGXKXXKXPPPXGGGPXXXXXXXXXXXXXGXAPPPPPPQXXX-- 672
PP PPP + K PPP PPPPPP+
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAG 349
Query: 673 KXPPPPXXFFFXXXXKKXGGPPXXXXXXXXPXXXPXXPPXXXXPPPXSPXXXXXXXGRGP 852
P PP + PP P P PPP S P
Sbjct: 350 SIPLPP---------QGRSAPP--------PPPPRSAPSTGRQPPPLSSSRAVSNPPAPP 392
Query: 853 PPXXSXXXPXXXPXXXXXXXXXXXPPXXXXPPXPPPXXXXPPXXXPPXXXXPPPXXPPXP 1032
P P P PP P PP P PP P PP P
Sbjct: 393 PAIPGRSAPALPPLGNASRTST--PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLP 450
Query: 1033 P 1035
P
Sbjct: 451 P 451
Score = 40.7 bits (91), Expect = 3e-04
Identities = 44/194 (22%), Positives = 48/194 (24%), Gaps = 16/194 (8%)
Frame = +3
Query: 504 PPPPPPXXKKKXGG-GGXKKXXXPPPXXGXPXXXXXXXXXXXXXGXXPPPPPPPK----- 665
PP PPP + KK PPP PPPPPPP+
Sbjct: 290 PPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAG 349
Query: 666 -------XXKXPPPPXXFFFXXXXKKXRGPPXXXXXXXXXPXPXPXPPXXXXXXPXXSXX 824
PPPP R PP P P P P
Sbjct: 350 SIPLPPQGRSAPPPPPP---RSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPL 406
Query: 825 XXGA-XGAGPXPXXXXPXPXXXXXXXXXXXXXXXXPXXXXPP-PPPXPXXXP-PXXXPPX 995
+ P P P PP PP P P P P
Sbjct: 407 GNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAA 466
Query: 996 XXXPPSXXXPPXPP 1037
PP+ PP P
Sbjct: 467 PPLPPAAPAPPPAP 480
Score = 34.3 bits (75), Expect = 0.029
Identities = 29/122 (23%), Positives = 32/122 (26%), Gaps = 1/122 (0%)
Frame = +2
Query: 677 PPPPPXXFFFXXXKKKXGAPPXXXXXXXXPXPXPXXPPXXXXXPPXLPXXXXXXGGGAXP 856
PPPPP ++ PP P P P LP P
Sbjct: 361 PPPPPPRSAPSTGRQ----PPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPP 416
Query: 857 XXXPPXXPXPXPXXGGGGGGGAXP-XXXXPPPXPXPXXXPPPPXXPXXXXXPLXXXPPXP 1033
PP P P + P PP P PP PL P P
Sbjct: 417 VPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAP 476
Query: 1034 PP 1039
PP
Sbjct: 477 PP 478
Score = 33.9 bits (74), Expect = 0.038
Identities = 28/104 (26%), Positives = 29/104 (27%), Gaps = 4/104 (3%)
Frame = +2
Query: 677 PPPPPXXFFFXXXKKKXGAPPXXXXXXXXPXPXPXXPPXXXXXPPXLPXXXXXX---GGG 847
PP PP + PP P P P PP LP G
Sbjct: 388 PPAPPPAI---PGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAP 444
Query: 848 AXPXXXPPXXPXPXPXXGG-GGGGGAXPXXXXPPPXPXPXXXPP 976
A P PP P P G P PPP P P P
Sbjct: 445 AAPPL-PPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 31.9 bits (69), Expect = 0.15
Identities = 20/68 (29%), Positives = 21/68 (30%), Gaps = 1/68 (1%)
Frame = +2
Query: 839 GGGAXPXXXPPXXPXPXPXXGGGGGGGAXPXXXXPPPXPXPXXXPPPPXXPXXXXXP-LX 1015
G G+ PP P P P G P PP P P P P
Sbjct: 328 GNGSSNSSLPP--PPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAV 385
Query: 1016 XXPPXPPP 1039
PP PPP
Sbjct: 386 SNPPAPPP 393
Score = 29.9 bits (64), Expect = 0.62
Identities = 23/86 (26%), Positives = 23/86 (26%), Gaps = 6/86 (6%)
Frame = +1
Query: 802 PPPXSPXXXXXXXGRGPPPXX------SXXXPXXXPXXXXXXXXXXXPPXXXXPPXPPPX 963
PPP P RG PP S P P P PP PPP
Sbjct: 311 PPPPPPPSRR---NRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPR 367
Query: 964 XXXPPXXXPPXXXXPPPXXPPXPPPP 1041
PP P PPP
Sbjct: 368 SAPSTGRQPPPLSSSRAVSNPPAPPP 393
Score = 29.9 bits (64), Expect = 0.62
Identities = 12/32 (37%), Positives = 13/32 (40%)
Frame = +3
Query: 945 PPPPXPXXXPPXXXPPXXXXPPSXXXPPXPPP 1040
PPPP P PP + PP PPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPP 342
Score = 29.5 bits (63), Expect = 0.82
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +3
Query: 942 PPPPPXPXXXPPXXXPPXXXXPPSXXXPPXPPP 1040
PPPPP P P S PP PPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPP 343
Score = 28.7 bits (61), Expect = 1.4
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +1
Query: 925 PPXXXXPPXPPPXXXXPPXXXPPXXXXPPPXXPPXPPP 1038
P PP PP P P P P PP PPP
Sbjct: 224 PTSTSAPPIPPSIPSSRPPERVPSLSAPAP--PPIPPP 259
Score = 27.9 bits (59), Expect = 2.5
Identities = 18/64 (28%), Positives = 18/64 (28%), Gaps = 1/64 (1%)
Frame = +2
Query: 854 PXXXPPXXPXPXPXXGGGGGGGAXPXXXXPP-PXPXPXXXPPPPXXPXXXXXPLXXXPPX 1030
P PP P P G A P P P P P P P P P
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPA 483
Query: 1031 PPPP 1042
P P
Sbjct: 484 PAAP 487
Score = 27.5 bits (58), Expect = 3.3
Identities = 25/114 (21%), Positives = 26/114 (22%), Gaps = 5/114 (4%)
Frame = +2
Query: 716 KKKXGAPPXXXXXXXXPXPXPXXPPXXXXXPPXLPXXXXXXGGGAXPXXXPPXXPXPXPX 895
KK+ PP P PP P G P P P P
Sbjct: 308 KKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPR 367
Query: 896 XGGGGGGGAXP-----XXXXPPPXPXPXXXPPPPXXPXXXXXPLXXXPPXPPPP 1042
G P PP P P P PP P PP
Sbjct: 368 SAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPP 421
Score = 26.6 bits (56), Expect = 5.8
Identities = 12/28 (42%), Positives = 12/28 (42%), Gaps = 1/28 (3%)
Frame = -3
Query: 918 PPPPPPPXXGXGXGXXG-GXXXGXAPPP 838
PPPPPP G G G PPP
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPP 339
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 41.5 bits (93), Expect = 2e-04
Identities = 36/159 (22%), Positives = 37/159 (23%), Gaps = 3/159 (1%)
Frame = +1
Query: 571 PPPXGGGPXXXXXXXXXXXXXGXAPPPPPPQXXXKXPPPPXXFFFXXXXKKXGGPPXXXX 750
P P G P A PP P P P PP
Sbjct: 1077 PAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVP 1136
Query: 751 XXXXPXXXPXXPPXXXXPPPXSPXXXXXXXGRGPPPXXSXXXPXXXPXXXXXXXXXXXPP 930
P P P +P P P S P P PP
Sbjct: 1137 SGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIP---PVPKPAAGVPPVPP 1193
Query: 931 XXXXPPXPPPXXXXPPXXXP---PXXXXPPPXXPPXPPP 1038
PP P P PP P P P PP P P
Sbjct: 1194 PSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVP 1232
Score = 38.7 bits (86), Expect = 0.001
Identities = 40/182 (21%), Positives = 43/182 (23%), Gaps = 4/182 (2%)
Frame = +1
Query: 505 PPPPPPXXKKKXXGGGXKXXKXPPPXGGGPXXXXXXXXXXXXXGXAPPPPPPQXXXKXPP 684
PP P P + P P G P PP P P
Sbjct: 1064 PPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPV 1123
Query: 685 PPXXFFFXXXXKKXGGPPXXXXXXXXPXXX-PXXPPXXXXPPPXSPXXXXXXXGRGPPPX 861
P G PP P P P P +P G P P
Sbjct: 1124 PKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPK 1183
Query: 862 XSXXXPXXXPXXXXXXXXXXXPPXXXXPPXPPPXXXXP---PXXXPPXXXXPPPXXPPXP 1032
+ P P P PP PPP P P P P PP P
Sbjct: 1184 PAAGVPPVPPPSEAPPVPK---PSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVP 1240
Query: 1033 PP 1038
P
Sbjct: 1241 AP 1242
Score = 38.3 bits (85), Expect = 0.002
Identities = 42/181 (23%), Positives = 43/181 (23%), Gaps = 3/181 (1%)
Frame = +1
Query: 505 PPPPPPXXKKKXXGGGXKXXKXPPPXGGGPXXXXXXXXXXXXXGXAPPPPPPQXXXKXPP 684
PP P P PPP P G APP P P P
Sbjct: 1041 PPVPIPTSTPPVPKSSSGAPSAPPPV---PAPSSEIPSIPAPSG-APPVPAPSGIPPVPK 1096
Query: 685 PPXXFFFXXXXKKXGGPPXXXXXXXXPXXXPXXPPXXXXPPPXSPXXXXXXXGRGPPPXX 864
P PP P P P +P P P
Sbjct: 1097 PSVAAP-PVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAP 1155
Query: 865 SXXXPXXXPXXXXXXXXXXXPPXXXXPPXPPPXXXXPPXXXP---PXXXXPPPXXPPXPP 1035
S P P P PP P P PP P P P PP PP
Sbjct: 1156 SGAPPVPKPSVAAPPVPA---PSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPP 1212
Query: 1036 P 1038
P
Sbjct: 1213 P 1213
Score = 35.9 bits (79), Expect = 0.009
Identities = 41/180 (22%), Positives = 42/180 (23%), Gaps = 2/180 (1%)
Frame = +1
Query: 508 PPPPPXXKKKXXGGGXKXXKXPPPXGGGPXXXXXXXXXXXXXGXAPPPPPPQXXXKXPPP 687
P P K G P P P PP P P P
Sbjct: 1046 PTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVP 1105
Query: 688 PXXFFFXXXXKKXGGPPXXXXXXXXPXXX-PXXPPXXXXPPPXSPXXXXXXXGRGPPPXX 864
G PP P P P P +P G P P
Sbjct: 1106 KPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPS-GAPPVPKP 1164
Query: 865 SXXXPXXXPXXXXXXXXXXXP-PXXXXPPXPPPXXXXPPXXXPPXXXXPPPXXPPXPPPP 1041
S P P P P PP PPP PP P P P PP P
Sbjct: 1165 SVAAP---PVPAPSSGIPPVPKPAAGVPPVPPP-SEAPPVPKPSVGVPPVPPPSTAPPVP 1220
Score = 35.9 bits (79), Expect = 0.009
Identities = 32/131 (24%), Positives = 33/131 (25%), Gaps = 2/131 (1%)
Frame = +1
Query: 649 PPPPQXXXKXPPPPXXFFFXXXXK-KXGGPPXXXXXXXXPXXXPXXP-PXXXXPPPXSPX 822
PP P+ PP P K PP P P P P P
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPP 1180
Query: 823 XXXXXXGRGPPPXXSXXXPXXXPXXXXXXXXXXXPPXXXXPPXPPPXXXXPPXXXPPXXX 1002
G P P S P P PP PP P P PP P
Sbjct: 1181 VPKPAAGVPPVPPPSEAPPVPKPSVGVPPV----PPPSTAPPVPTPSAGLPPVPVPTAKA 1236
Query: 1003 XPPPXXPPXPP 1035
P P P
Sbjct: 1237 PPVPAPSSEAP 1247
Score = 27.1 bits (57), Expect = 4.4
Identities = 21/95 (22%), Positives = 22/95 (23%), Gaps = 3/95 (3%)
Frame = +2
Query: 764 PXPXPXXPPXXXXXPPXLPXXXXXXGGGAXPXXXPPXXPXPXPXXGGGGGGGAXPXXXXP 943
P P P P P P P P + P
Sbjct: 1023 PVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGA 1082
Query: 944 PPXPXPXXXPP---PPXXPXXXXXPLXXXPPXPPP 1039
PP P P PP P P PP P P
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAP 1117
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 36.7 bits (81), Expect = 0.005
Identities = 17/41 (41%), Positives = 18/41 (43%)
Frame = +2
Query: 920 AXPXXXXPPPXPXPXXXPPPPXXPXXXXXPLXXXPPXPPPP 1042
A P P P P P PPPP P P+ PP PPP
Sbjct: 1698 APPQMSAPTPPPPPMSVPPPPSAP-----PMPAGPPSAPPP 1733
Score = 35.9 bits (79), Expect = 0.009
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +1
Query: 925 PPXXXXPPXPPPXXXXPPXXXPPXXXXPPPXXPPXPPP 1038
PP P PPP PP P PP PP P P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 27.1 bits (57), Expect(2) = 0.67
Identities = 11/35 (31%), Positives = 13/35 (37%)
Frame = +1
Query: 775 PXXPPXXXXPPPXSPXXXXXXXGRGPPPXXSXXXP 879
P PP PPP +P PPP + P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAP 1741
Score = 27.1 bits (57), Expect = 4.4
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 2/40 (5%)
Frame = +1
Query: 925 PPXXXXPPXP--PPXXXXPPXXXPPXXXXPPPXXPPXPPP 1038
PP PP P PP PP PP P P P P
Sbjct: 1709 PPPMSVPPPPSAPPMPAGPPSAPPP--PLPASSAPSVPNP 1746
Score = 21.0 bits (42), Expect(2) = 0.67
Identities = 7/12 (58%), Positives = 7/12 (58%)
Frame = +1
Query: 655 PPQXXXKXPPPP 690
PPQ PPPP
Sbjct: 1699 PPQMSAPTPPPP 1710
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 273
Score = 36.7 bits (81), Expect = 0.005
Identities = 29/93 (31%), Positives = 29/93 (31%), Gaps = 1/93 (1%)
Frame = -1
Query: 1037 GGGXGGXXGGGXXXXGGXXXGGXXXXGGGXGGXXXXGGXXXXXXXXXXXGXXXGXXXXXX 858
GGG GG GG GG GG GG GG G G
Sbjct: 187 GGGFGGFGGGS---------GGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGP 237
Query: 857 GG-GPRPXXXXXXXGXXGGGXXXXGGXXGXXXG 762
GG G P G GGG GG G G
Sbjct: 238 GGFGGGPGGFGGGLGGFGGGPGGFGGGPGGHGG 270
Score = 30.7 bits (66), Expect = 0.36
Identities = 23/81 (28%), Positives = 24/81 (29%)
Frame = -3
Query: 960 GXGXGGGXXXXGXAPPPPPPPXXGXGXGXXGGXXXGXAPPPXXXXXXGRXGGXXXXXGGX 781
G GG G + PPP P G G GG G GG GG
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHG---GHGGFGGGPGGFEGGPGGF 240
Query: 780 XGXGXGXXXXXXXXGGAPXFF 718
G G GG P F
Sbjct: 241 GGGPGGFGGGLGGFGGGPGGF 261
Score = 29.5 bits (63), Expect = 0.82
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -2
Query: 1039 GGGXGGXXXEGGXXXXGGXXXGGXXXGXGGGGGXXXXG 926
GGG GG G G GG G GGG G G
Sbjct: 227 GGGPGGFEGGPGGFGGGPGGFGGGLGGFGGGPGGFGGG 264
Score = 26.2 bits (55), Expect = 7.7
Identities = 21/68 (30%), Positives = 22/68 (32%)
Frame = -2
Query: 685 GGGXXXXFGGGGGGGXXPXXXXXXXXXXXXWGXPXXGGGFXXFFXPPPPXFFFXXGGGGG 506
GGG FGG GGG P +G G F P F GG GG
Sbjct: 187 GGG----FGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGG 242
Query: 505 GXXXIXXG 482
G G
Sbjct: 243 GPGGFGGG 250
Score = 26.2 bits (55), Expect = 7.7
Identities = 15/38 (39%), Positives = 15/38 (39%), Gaps = 1/38 (2%)
Frame = -2
Query: 1036 GGXGGXXXEGGXXXXGGXXXGGXXXGXGG-GGGXXXXG 926
GG GG G G GG G GG GGG G
Sbjct: 211 GGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGGFG 248
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 34.3 bits (75), Expect = 0.029
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +2
Query: 941 PPPXPXPXXXPPPPXXPXXXXXPLXXXPPXPPPP 1042
P P P P PPP P PP PPPP
Sbjct: 750 PVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 33.9 bits (74), Expect = 0.038
Identities = 18/53 (33%), Positives = 18/53 (33%)
Frame = +3
Query: 504 PPPPPPXXKKKXGGGGXKKXXXPPPXXGXPXXXXXXXXXXXXXGXXPPPPPPP 662
PPPPPP P P G P G PPPPPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGA-GPPPPPPPPP 783
Score = 33.5 bits (73), Expect = 0.051
Identities = 21/62 (33%), Positives = 21/62 (33%)
Frame = +1
Query: 505 PPPPPPXXKKKXXGGGXKXXKXPPPXGGGPXXXXXXXXXXXXXGXAPPPPPPQXXXKXPP 684
PPPPPP P P GGP PPPPPP PP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPP---------------PPPPPPGVAGAGPP 776
Query: 685 PP 690
PP
Sbjct: 777 PP 778
Score = 33.1 bits (72), Expect = 0.067
Identities = 15/36 (41%), Positives = 15/36 (41%), Gaps = 3/36 (8%)
Frame = +1
Query: 943 PPXPPPXXXXPPXXXPPXXXXPPP---XXPPXPPPP 1041
PP PPP P P PP PP PPPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 32.7 bits (71), Expect = 0.088
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = +1
Query: 925 PPXXXXPPXPPPXXXXPPXXXPPXXXXPPPXXPPXPPP 1038
P PP P PP PP P PP PPP
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 30.7 bits (66), Expect = 0.36
Identities = 16/44 (36%), Positives = 16/44 (36%), Gaps = 5/44 (11%)
Frame = +1
Query: 925 PPXXXXPPXPPPXXXXPPXXXPPXXXXPPPXXPP-----XPPPP 1041
PP P P P P P PPP PP PPPP
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 30.7 bits (66), Expect = 0.36
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 633 GXXPPPPPPPKXXKXPPPP 689
G PPPPPP PPPP
Sbjct: 760 GPPPPPPPPGVAGAGPPPP 778
Score = 30.3 bits (65), Expect = 0.47
Identities = 21/72 (29%), Positives = 21/72 (29%), Gaps = 1/72 (1%)
Frame = +2
Query: 734 PPXXXXXXXXPXPXPXXPP-XXXXXPPXLPXXXXXXGGGAXPXXXPPXXPXPXPXXGGGG 910
PP P P P PP PP P G G PP P P P GG
Sbjct: 736 PPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAG------PPPPPPPPPAVSAGG 789
Query: 911 GGGAXPXXXXPP 946
P P
Sbjct: 790 SRYYAPAPQAEP 801
Score = 30.3 bits (65), Expect = 0.47
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +3
Query: 633 GXXPPPPPPPKXXKXPPPP 689
G PPPPPPP PPP
Sbjct: 759 GGPPPPPPPPGVAGAGPPP 777
Score = 29.9 bits (64), Expect = 0.62
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +3
Query: 480 PPXKIXXXPPPPPPXXKKKXGGGGXKKXXXPPP 578
PP I PPPPPP G G PPP
Sbjct: 753 PPAPIMGGPPPPPP--PPGVAGAGPPPPPPPPP 783
Score = 28.7 bits (61), Expect = 1.4
Identities = 18/57 (31%), Positives = 19/57 (33%)
Frame = +1
Query: 640 APPPPPPQXXXKXPPPPXXFFFXXXXKKXGGPPXXXXXXXXPXXXPXXPPXXXXPPP 810
+PPPPPP P P GGPP P PP PPP
Sbjct: 731 SPPPPPPAVIV-PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPP---PPPP 783
Score = 28.3 bits (60), Expect = 1.9
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = +2
Query: 854 PXXXPPXXPXPXPXXGGGGGGGAXPXXXXPPPXPXPXXXPPPPXXP 991
P P P P P GG P PPP PPPP P
Sbjct: 744 PAPAPIPVPPPAPIMGG-------PPPPPPPPGVAGAGPPPPPPPP 782
Score = 28.3 bits (60), Expect = 1.9
Identities = 11/29 (37%), Positives = 12/29 (41%)
Frame = +3
Query: 927 PXXXXPPPPPXPXXXPPXXXPPXXXXPPS 1013
P PPPPP P PP PP+
Sbjct: 756 PIMGGPPPPPPPPGVAGAGPPPPPPPPPA 784
Score = 27.5 bits (58), Expect = 3.3
Identities = 10/20 (50%), Positives = 10/20 (50%)
Frame = -3
Query: 942 GXXXXGXAPPPPPPPXXGXG 883
G G PPPPPPP G
Sbjct: 769 GVAGAGPPPPPPPPPAVSAG 788
Score = 26.6 bits (56), Expect = 5.8
Identities = 13/30 (43%), Positives = 13/30 (43%)
Frame = -3
Query: 927 GXAPPPPPPPXXGXGXGXXGGXXXGXAPPP 838
G PPPPPPP G G PPP
Sbjct: 759 GGPPPPPPPP------GVAGAGPPPPPPPP 782
Score = 26.6 bits (56), Expect = 5.8
Identities = 9/17 (52%), Positives = 9/17 (52%)
Frame = -3
Query: 927 GXAPPPPPPPXXGXGXG 877
G PPPPPPP G
Sbjct: 772 GAGPPPPPPPPPAVSAG 788
Score = 26.2 bits (55), Expect = 7.7
Identities = 18/71 (25%), Positives = 18/71 (25%), Gaps = 1/71 (1%)
Frame = +2
Query: 677 PPPPPXXFFFXXXKKKXGAPPXXXX-XXXXPXPXPXXPPXXXXXPPXLPXXXXXXGGGAX 853
PPPPP PP P P P PP P GG
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRY 792
Query: 854 PXXXPPXXPXP 886
P P P
Sbjct: 793 YAPAPQAEPEP 803
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 32.7 bits (71), Expect = 0.088
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +1
Query: 955 PPXXXXPPXXXPPXXXXPPPXXPPXPPPP 1041
PP PP PP PP PP PPPP
Sbjct: 5 PPGNPPPP---PPPPGFEPPSQPPPPPPP 30
Score = 31.1 bits (67), Expect = 0.27
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +3
Query: 960 PXXXPPXXXPPXXXXPPSXXXPPXPP 1037
P PP PP PPS PP PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 30.7 bits (66), Expect = 0.36
Identities = 11/22 (50%), Positives = 11/22 (50%)
Frame = +3
Query: 927 PXXXXPPPPPXPXXXPPXXXPP 992
P PPPPP P PP PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPP 26
Score = 30.7 bits (66), Expect = 0.36
Identities = 12/21 (57%), Positives = 13/21 (61%), Gaps = 2/21 (9%)
Frame = +3
Query: 633 GXXPPPPPPP--KXXKXPPPP 689
G PPPPPPP + PPPP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPP 27
Score = 29.9 bits (64), Expect = 0.62
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +1
Query: 943 PPXPPPXXXXPPXXXPPXXXXPPPXXPP 1026
PP PP PP PP PPP PP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQ--PPPPPPP 30
Score = 29.5 bits (63), Expect = 0.82
Identities = 13/29 (44%), Positives = 13/29 (44%)
Frame = +1
Query: 928 PXXXXPPXPPPXXXXPPXXXPPXXXXPPP 1014
P PP PPP PP PP PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPP---PPPP 30
Score = 27.5 bits (58), Expect = 3.3
Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 3/22 (13%)
Frame = +1
Query: 634 GXAPPPPPP---QXXXKXPPPP 690
G PPPPPP + + PPPP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPP 28
Score = 24.2 bits (50), Expect(2) = 3.9
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 642 PPPPPPPKXXK 674
PPPPPPP K
Sbjct: 24 PPPPPPPGYVK 34
Score = 21.0 bits (42), Expect(2) = 3.9
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +3
Query: 504 PPPPPP 521
PPPPPP
Sbjct: 9 PPPPPP 14
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 309
Score = 31.9 bits (69), Expect = 0.15
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +1
Query: 925 PPXXXXPPXPPPXXXXPPXXXPPXXXXPPPXXPPXPPPP 1041
PP PP P PP PP PPP PP P
Sbjct: 124 PPSAPAPPTPQSELR-PPTSAPPRPSIPPPSPASAPPIP 161
Score = 30.7 bits (66), Expect = 0.36
Identities = 21/81 (25%), Positives = 22/81 (27%), Gaps = 1/81 (1%)
Frame = +1
Query: 802 PPPXSPXXXXXXXGRGPPPXXSXXXPXXXPXXXXXXXXXXXP-PXXXXPPXPPPXXXXPP 978
P P +P PP P P P P PP P P
Sbjct: 128 PAPPTPQSELRPPTSAPP---RPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSP 184
Query: 979 XXXPPXXXXPPPXXPPXPPPP 1041
P PP P PPPP
Sbjct: 185 PSAPSLPSAVPPMPPKVPPPP 205
Score = 23.4 bits (48), Expect(2) = 7.9
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +1
Query: 643 PPPPPPQXXXKXPPPP 690
PPPP P P PP
Sbjct: 7 PPPPAPAPAAAAPAPP 22
Score = 21.0 bits (42), Expect(2) = 7.9
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +1
Query: 505 PPPPPP 522
PPPPPP
Sbjct: 5 PPPPPP 10
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 31.1 bits (67), Expect = 0.27
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +1
Query: 955 PPXXXXPPXXXPPXXXXPPPXXPPXPPPP 1041
PP PP P P PP PPPP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPP 195
Score = 28.3 bits (60), Expect = 1.9
Identities = 20/83 (24%), Positives = 22/83 (26%), Gaps = 3/83 (3%)
Frame = +3
Query: 570 PPPXXGXPXXXXXXXXXXXXXGXXPPPPPPPKXXKXPP---PPXXFFFXXXXKKXRGPPX 740
PPP P PPPPPPP P ++ PP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPP- 225
Query: 741 XXXXXXXXPXPXPXPPXXXXXXP 809
P P P PP P
Sbjct: 226 TYTPKQADPLPAPPPPPPPTLPP 248
Score = 28.3 bits (60), Expect = 1.9
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +3
Query: 954 PXPXXXPPXXXPPXXXXPPSXXXPPXPPP 1040
P P PP P P PP PPP
Sbjct: 167 PPPSFQPPSAAAPATSLPSDYNPPPPPPP 195
Score = 26.6 bits (56), Expect = 5.8
Identities = 13/44 (29%), Positives = 13/44 (29%)
Frame = +2
Query: 908 GGGGAXPXXXXPPPXPXPXXXPPPPXXPXXXXXPLXXXPPXPPP 1039
GG P P P P P PP P PP P
Sbjct: 882 GGEALAAPVAVPAPIPAPVAEPAPPAAPAKEVVEKAPSPPATRP 925
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 31.1 bits (67), Expect = 0.27
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -1
Query: 1040 GGGGXGGXXGGGXXXXGGXXXGGXXXXGGGXGGXXXXGG 924
G GG GG GG G GG GG GG G
Sbjct: 24 GRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSG 62
Score = 30.3 bits (65), Expect = 0.47
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -1
Query: 1037 GGGXGGXXGGGXXXXGGXXXGGXXXXGGGXGGXXXXGG 924
GGG GG GGG G G GG G GG
Sbjct: 29 GGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||Manual
Length = 500
Score = 29.1 bits (62), Expect = 1.1
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = -3
Query: 1041 GGGGXGGXXXRGXXXXXGXXGGGGXXXGXGXGG 943
GGG GG G G GG G G G GG
Sbjct: 446 GGGSRGGRGGFGGRGGFGGRGGFGGGRGRGRGG 478
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 331
Score = 28.7 bits (61), Expect = 1.4
Identities = 13/39 (33%), Positives = 13/39 (33%)
Frame = +1
Query: 925 PPXXXXPPXPPPXXXXPPXXXPPXXXXPPPXXPPXPPPP 1041
PP P P PP P P P PP P P
Sbjct: 107 PPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLPNEP 145
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 25.4 bits (53), Expect(2) = 1.6
Identities = 8/14 (57%), Positives = 9/14 (64%)
Frame = +3
Query: 642 PPPPPPPKXXKXPP 683
PPPPPPP+ P
Sbjct: 371 PPPPPPPELLNHSP 384
Score = 21.4 bits (43), Expect(2) = 1.6
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 492 IXXXPPPPPP 521
I PPPPPP
Sbjct: 366 ISYSPPPPPP 375
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 27.9 bits (59), Expect = 2.5
Identities = 30/140 (21%), Positives = 30/140 (21%), Gaps = 5/140 (3%)
Frame = +1
Query: 634 GXAPPPPPPQXXXKXPPPPXXFFFXXXXKKXGGPPXXXXXXXXPXXXPXXPPXXXXPPPX 813
G PPPP PP P P P PPP
Sbjct: 204 GEHMPPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPP- 262
Query: 814 SPXXXXXXXGRGPPPXXSXXXPXXXPXXXXXXXXXXXPPXXXXPPX-----PPPXXXXPP 978
P PPP P PP PPP P
Sbjct: 263 -PMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPG 321
Query: 979 XXXPPXXXXPPPXXPPXPPP 1038
PP P PPP
Sbjct: 322 EHMPPPPMHHEPGEHMPPPP 341
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 27.9 bits (59), Expect = 2.5
Identities = 10/16 (62%), Positives = 10/16 (62%)
Frame = +1
Query: 640 APPPPPPQXXXKXPPP 687
APPPPPP K PP
Sbjct: 1881 APPPPPPMALPKAGPP 1896
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 23.8 bits (49), Expect(2) = 4.0
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 642 PPPPPPP 662
PPPPPPP
Sbjct: 947 PPPPPPP 953
Score = 21.4 bits (43), Expect(2) = 4.0
Identities = 7/10 (70%), Positives = 7/10 (70%)
Frame = +3
Query: 504 PPPPPPXXKK 533
PPPPPP K
Sbjct: 907 PPPPPPLPVK 916
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 26.2 bits (55), Expect = 7.7
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = -3
Query: 942 GXXXXGXAPPPPPPP 898
G G PPPPPPP
Sbjct: 298 GDSANGGLPPPPPPP 312
Score = 23.8 bits (49), Expect(2) = 5.7
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +3
Query: 642 PPPPPPP 662
PPPPPPP
Sbjct: 308 PPPPPPP 314
Score = 21.0 bits (42), Expect(2) = 5.7
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +3
Query: 504 PPPPPP 521
PPPPPP
Sbjct: 307 PPPPPP 312
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 26.6 bits (56), Expect = 5.8
Identities = 14/35 (40%), Positives = 14/35 (40%), Gaps = 2/35 (5%)
Frame = -1
Query: 1040 GGGGXGGXXGGGXXXXGGXXXGG--XXXXGGGXGG 942
GG GG GG GG GG GG GG
Sbjct: 155 GGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGG 189
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.316 0.154 0.573
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,622,611
Number of Sequences: 5004
Number of extensions: 51650
Number of successful extensions: 873
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 58
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 426
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 549226150
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.9 bits)
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