Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_L19
         (892 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.     22   5.6  
AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.      22   7.4  
AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.      22   7.4  
AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B prot...    22   7.4  
DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulati...    21   9.8  
AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.       21   9.8  

>AJ307577-1|CAC84070.1|  301|Tribolium castaneum dachshund protein.
          Length = 301

 Score = 22.2 bits (45), Expect = 5.6
 Identities = 8/18 (44%), Positives = 10/18 (55%)
 Frame = +1

Query: 148 NMCPTKSRRDMDTIVTDC 201
           N C   S +D DT+  DC
Sbjct: 14  NRCKLLSCKDFDTLYRDC 31


>AY800247-1|AAV66724.1|  790|Tribolium castaneum pangolin protein.
          Length = 790

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +1

Query: 679 PPPPPPXXTPP 711
           PPPP P   PP
Sbjct: 736 PPPPHPHHQPP 746


>AY800246-1|AAV66723.1|  682|Tribolium castaneum pangolin protein.
          Length = 682

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +1

Query: 679 PPPPPPXXTPP 711
           PPPP P   PP
Sbjct: 628 PPPPHPHHQPP 638


>AF227923-1|AAF36721.1|  351|Tribolium castaneum abdominal-B
           protein.
          Length = 351

 Score = 21.8 bits (44), Expect = 7.4
 Identities = 9/26 (34%), Positives = 9/26 (34%)
 Frame = +1

Query: 763 PPPPPXXXXXXXSPPXAPGPXXXPPP 840
           PPP P       S      P   PPP
Sbjct: 11  PPPAPQSAATPISSSGMTSPAAAPPP 36



 Score = 21.8 bits (44), Expect = 7.4
 Identities = 8/16 (50%), Positives = 8/16 (50%)
 Frame = +2

Query: 773 PXPXPXXXXPPPXXLG 820
           P P P    PPP  LG
Sbjct: 205 PEPVPSTPYPPPGSLG 220


>DQ490059-1|ABF22614.1|  947|Tribolium castaneum short gastrulation
           protein.
          Length = 947

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 8/16 (50%), Positives = 10/16 (62%)
 Frame = -3

Query: 329 TDFCLNNLSECSTNEC 282
           T FC N  ++C T EC
Sbjct: 695 TCFCENGNNKCFTMEC 710


>AY453651-1|AAR89057.1|  199|Tribolium castaneum serrate protein.
          Length = 199

 Score = 21.4 bits (43), Expect = 9.8
 Identities = 5/14 (35%), Positives = 9/14 (64%)
 Frame = -3

Query: 323 FCLNNLSECSTNEC 282
           +C  N+++C  N C
Sbjct: 64  YCHENINDCKVNPC 77


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 171,083
Number of Sequences: 336
Number of extensions: 4221
Number of successful extensions: 11
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24720487
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)