Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_L18
(934 letters)
Database: tribolium
336 sequences; 122,585 total letters
Searching.......................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase rever... 25 1.1
AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholo... 24 1.5
AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicas... 24 1.9
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro... 23 3.4
EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic acetyl... 23 4.5
EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic acetyl... 23 4.5
EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic acetyl... 23 4.5
EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic acetyl... 23 4.5
EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic acetyl... 23 4.5
AJ621748-1|CAF21851.1| 228|Tribolium castaneum zinc finger tran... 23 4.5
DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired pr... 22 7.9
AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein. 22 7.9
AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein. 22 7.9
>DQ372925-1|ABD17350.1| 596|Tribolium castaneum telomerase reverse
transcriptase protein.
Length = 596
Score = 24.6 bits (51), Expect = 1.1
Identities = 16/49 (32%), Positives = 25/49 (51%)
Frame = +3
Query: 9 SXPSHYREFLKICFLVDVCSRRTLFFRHYTFRVN*DLKNALRGRVFTGC 155
S P+H + K F+VD S + + FR ++ N L L+G +GC
Sbjct: 270 SIPTHLLDSEKKNFIVDHISNQFVAFRRKIYKWNHGL---LQGDPLSGC 315
>AF219117-1|AAF71999.1| 406|Tribolium castaneum tailless ortholog
protein.
Length = 406
Score = 24.2 bits (50), Expect = 1.5
Identities = 12/28 (42%), Positives = 12/28 (42%), Gaps = 3/28 (10%)
Frame = +3
Query: 564 PPPPXPPPXX---PXPPPPXXPPPPXPP 638
P P PP PP P PP P PP
Sbjct: 160 PGPALPPTGFLCNNYPPLPQVPPLPLPP 187
Score = 21.8 bits (44), Expect = 7.9
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = +3
Query: 573 PXPPPXXPXPPPPXXPPPPXPP 638
P P P P PP PP P
Sbjct: 175 PPLPQVPPLPLPPIFPPTMINP 196
>AY887136-1|AAW78361.1| 580|Tribolium castaneum vasa RNA helicase
protein.
Length = 580
Score = 23.8 bits (49), Expect = 1.9
Identities = 10/23 (43%), Positives = 10/23 (43%)
Frame = -3
Query: 644 GXXGXXGGGGXGGGXXGXXXGGG 576
G GGG GGG G GG
Sbjct: 85 GENNDDSGGGRGGGRDGDRGDGG 107
Score = 23.4 bits (48), Expect = 2.6
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = -1
Query: 643 GXGGXGGGGXXGGGGXGXXGGGXG 572
G GG GGG G G G G
Sbjct: 85 GENNDDSGGGRGGGRDGDRGDGGG 108
Score = 22.6 bits (46), Expect = 4.5
Identities = 11/33 (33%), Positives = 20/33 (60%)
Frame = +1
Query: 187 DVEKILSSVGIEADGEKLXKVITELNGKDVEQL 285
DVE++LS + A GE+ + + ++V+QL
Sbjct: 329 DVEEMLSHQSMPATGERQTLMFSATFPEEVQQL 361
>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 protein.
Length = 2700
Score = 23.0 bits (47), Expect = 3.4
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = +2
Query: 569 PPXPPPXPXPPXPPXXPPPPXP 634
P P PP PP PP P
Sbjct: 1367 PEWQPTEWHPPIPPTSEKPPLP 1388
Score = 22.6 bits (46), Expect = 4.5
Identities = 8/18 (44%), Positives = 8/18 (44%)
Frame = +2
Query: 569 PPXPPPXPXPPXPPXXPP 622
PP PP PP P P
Sbjct: 1376 PPIPPTSEKPPLPEELKP 1393
>EF127810-1|ABL67947.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
5 protein.
Length = 311
Score = 22.6 bits (46), Expect = 4.5
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +1
Query: 226 DGEKLXKVITELNGKDVEQLIAAGREKLSSMP 321
DG +L V+ +G D+ I G L MP
Sbjct: 152 DGNQLDLVLNSESGGDLSDFITNGEWYLIGMP 183
>EF127809-1|ABL67946.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
4 protein.
Length = 311
Score = 22.6 bits (46), Expect = 4.5
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +1
Query: 226 DGEKLXKVITELNGKDVEQLIAAGREKLSSMP 321
DG +L V+ +G D+ I G L MP
Sbjct: 152 DGNQLDLVLNSESGGDLSDFITNGEWYLIGMP 183
>EF127808-1|ABL67945.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
3 protein.
Length = 311
Score = 22.6 bits (46), Expect = 4.5
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +1
Query: 226 DGEKLXKVITELNGKDVEQLIAAGREKLSSMP 321
DG +L V+ +G D+ I G L MP
Sbjct: 152 DGNQLDLVLNSESGGDLSDFITNGEWYLIGMP 183
>EF127807-1|ABL67944.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
2 protein.
Length = 311
Score = 22.6 bits (46), Expect = 4.5
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +1
Query: 226 DGEKLXKVITELNGKDVEQLIAAGREKLSSMP 321
DG +L V+ +G D+ I G L MP
Sbjct: 152 DGNQLDLVLNSESGGDLSDFITNGEWYLIGMP 183
>EF127806-1|ABL67943.1| 311|Tribolium castaneum nicotinic
acetylcholine receptor subunitalpha 6 transcript variant
1 protein.
Length = 311
Score = 22.6 bits (46), Expect = 4.5
Identities = 11/32 (34%), Positives = 15/32 (46%)
Frame = +1
Query: 226 DGEKLXKVITELNGKDVEQLIAAGREKLSSMP 321
DG +L V+ +G D+ I G L MP
Sbjct: 152 DGNQLDLVLNSESGGDLSDFITNGEWYLIGMP 183
>AJ621748-1|CAF21851.1| 228|Tribolium castaneum zinc finger
transcription factor protein.
Length = 228
Score = 22.6 bits (46), Expect = 4.5
Identities = 12/36 (33%), Positives = 15/36 (41%)
Frame = -3
Query: 332 PPPTGIDDSFSRPAAISCSTSLPLSSVITFXSFSPS 225
P P + F R IS + P S + S SPS
Sbjct: 172 PSPASDSECFDRRKFISALVNAPSVSPASLPSISPS 207
>DQ414248-1|ABD63010.2| 311|Tribolium castaneum sloppy-paired
protein.
Length = 311
Score = 21.8 bits (44), Expect = 7.9
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +2
Query: 554 FTXPTPPXPPPXPXPP 601
F P P PPP P P
Sbjct: 199 FYQPLQPFPPPYPFYP 214
>AY800247-1|AAV66724.1| 790|Tribolium castaneum pangolin protein.
Length = 790
Score = 21.8 bits (44), Expect = 7.9
Identities = 14/45 (31%), Positives = 15/45 (33%), Gaps = 4/45 (8%)
Frame = +2
Query: 539 FYXIXFTXPTPPXPPPXPXPP----XPPXXPPPPXPPXPXXHTXP 661
FY T PP P P PP P P P P + P
Sbjct: 221 FYRFSPTGLIPPHPGLSPHPPHLSSHPAIVTPGPKQELPDLNHKP 265
Score = 21.8 bits (44), Expect = 7.9
Identities = 11/34 (32%), Positives = 11/34 (32%)
Frame = +2
Query: 581 PPXPXPPXPPXXPPPPXPPXPXXHTXPGPXXSPP 682
P PP P P PP PGP P
Sbjct: 226 PTGLIPPHPGLSPHPPHLSSHPAIVTPGPKQELP 259
>AY800246-1|AAV66723.1| 682|Tribolium castaneum pangolin protein.
Length = 682
Score = 21.8 bits (44), Expect = 7.9
Identities = 14/45 (31%), Positives = 15/45 (33%), Gaps = 4/45 (8%)
Frame = +2
Query: 539 FYXIXFTXPTPPXPPPXPXPP----XPPXXPPPPXPPXPXXHTXP 661
FY T PP P P PP P P P P + P
Sbjct: 113 FYRFSPTGLIPPHPGLSPHPPHLSSHPAIVTPGPKQELPDLNHKP 157
Score = 21.8 bits (44), Expect = 7.9
Identities = 11/34 (32%), Positives = 11/34 (32%)
Frame = +2
Query: 581 PPXPXPPXPPXXPPPPXPPXPXXHTXPGPXXSPP 682
P PP P P PP PGP P
Sbjct: 118 PTGLIPPHPGLSPHPPHLSSHPAIVTPGPKQELP 151
Database: tribolium
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 122,585
Number of sequences in database: 336
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 163,011
Number of Sequences: 336
Number of extensions: 4390
Number of successful extensions: 46
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 21
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 42
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 26168549
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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