BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_L18
(934 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein. 31 0.020
X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor pro... 25 0.98
DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chlor... 24 1.7
DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related pro... 24 1.7
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr... 23 3.0
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul... 23 4.0
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A... 23 4.0
AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine rece... 22 9.2
>AB270697-1|BAF75928.1| 735|Apis mellifera FoxP protein protein.
Length = 735
Score = 30.7 bits (66), Expect = 0.020
Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 1/41 (2%)
Frame = +2
Query: 563 PTPPXPPPXPXPPXPPXXPPPPXPPXPXXHTXP-GPXXSPP 682
P+ P P P P P P PP P P GP +PP
Sbjct: 16 PSSGAPGPQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPP 56
Score = 27.5 bits (58), Expect = 0.18
Identities = 10/23 (43%), Positives = 11/23 (47%)
Frame = +2
Query: 566 TPPXPPPXPXPPXPPXXPPPPXP 634
+PP P P P PP PP P
Sbjct: 38 SPPNPSQGPPPGGPPGAPPSQNP 60
Score = 27.1 bits (57), Expect = 0.24
Identities = 12/37 (32%), Positives = 12/37 (32%)
Frame = +2
Query: 572 PXPPPXPXPPXPPXXPPPPXPPXPXXHTXPGPXXSPP 682
P P PP P PPP PP P P
Sbjct: 31 PQAPQRGSPPNPSQGPPPGGPPGAPPSQNPSQMMISP 67
Score = 24.6 bits (51), Expect = 1.3
Identities = 12/29 (41%), Positives = 12/29 (41%), Gaps = 2/29 (6%)
Frame = +3
Query: 558 PXPPPPXPP--PXXPXPPPPXXPPPPXPP 638
P P P P P PP P PPP P
Sbjct: 23 PQPSPHQSPQAPQRGSPPNPSQGPPPGGP 51
Score = 24.6 bits (51), Expect = 1.3
Identities = 10/26 (38%), Positives = 10/26 (38%)
Frame = +3
Query: 558 PXPPPPXPPPXXPXPPPPXXPPPPXP 635
P P PP PPP PP P
Sbjct: 31 PQAPQRGSPPNPSQGPPPGGPPGAPP 56
Score = 23.0 bits (47), Expect = 4.0
Identities = 9/22 (40%), Positives = 9/22 (40%)
Frame = +3
Query: 558 PXPPPPXPPPXXPXPPPPXXPP 623
P P PPP P PP P
Sbjct: 39 PPNPSQGPPPGGPPGAPPSQNP 60
Score = 22.6 bits (46), Expect = 5.2
Identities = 11/35 (31%), Positives = 11/35 (31%)
Frame = +2
Query: 572 PXPPPXPXPPXPPXXPPPPXPPXPXXHTXPGPXXS 676
P P P P P PP P PG S
Sbjct: 23 PQPSPHQSPQAPQRGSPPNPSQGPPPGGPPGAPPS 57
>X72575-1|CAA51167.1| 168|Apis mellifera Apidaecin precursor
protein.
Length = 168
Score = 25.0 bits (52), Expect = 0.98
Identities = 13/35 (37%), Positives = 14/35 (40%), Gaps = 5/35 (14%)
Frame = +3
Query: 555 LPXPPPPXP-----PPXXPXPPPPXXPPPPXPPXP 644
+P P PP P P P P P P PP P
Sbjct: 106 IPQPRPPHPRLRREPEAEPGNNRPVYIPQPRPPHP 140
Score = 25.0 bits (52), Expect = 0.98
Identities = 13/35 (37%), Positives = 14/35 (40%), Gaps = 5/35 (14%)
Frame = +3
Query: 555 LPXPPPPXP-----PPXXPXPPPPXXPPPPXPPXP 644
+P P PP P P P P P P PP P
Sbjct: 132 IPQPRPPHPRLRREPEAEPGNNRPVYIPQPRPPHP 166
>DQ667187-1|ABG75739.1| 428|Apis mellifera histamine-gated chloride
channel protein.
Length = 428
Score = 24.2 bits (50), Expect = 1.7
Identities = 12/39 (30%), Positives = 13/39 (33%)
Frame = +1
Query: 511 FXSXMMASVFLXXXFYLXXXXXXXXXXXPXXPPPXPPPP 627
F S VF+ Y P P P PPPP
Sbjct: 310 FMSVCTVFVFMALMEYCLVNIVLGDSDTPPKPAPPPPPP 348
Score = 23.8 bits (49), Expect = 2.3
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +3
Query: 558 PXPPPPXPPPXXPXP 602
P P PP PPP P
Sbjct: 339 PKPAPPPPPPSSSGP 353
Score = 23.4 bits (48), Expect = 3.0
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +2
Query: 596 PPXPPXXPPPPXPPXP 643
PP P PPPP P
Sbjct: 338 PPKPAPPPPPPSSSGP 353
Score = 23.0 bits (47), Expect = 4.0
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +3
Query: 564 PPPPXPPPXXPXPPPP 611
PP P PPP P P
Sbjct: 338 PPKPAPPPPPPSSSGP 353
Score = 23.0 bits (47), Expect = 4.0
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +3
Query: 579 PPPXXPXPPPPXXPPP 626
PP P PPPP P
Sbjct: 338 PPKPAPPPPPPSSSGP 353
Score = 23.0 bits (47), Expect = 4.0
Identities = 8/16 (50%), Positives = 8/16 (50%)
Frame = +2
Query: 581 PPXPXPPXPPXXPPPP 628
PP P PP PP P
Sbjct: 338 PPKPAPPPPPPSSSGP 353
Score = 22.2 bits (45), Expect = 6.9
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +2
Query: 557 TXPTPPXPPPXPXPPXP 607
T P P PPP P P
Sbjct: 337 TPPKPAPPPPPPSSSGP 353
>DQ015969-1|AAY81926.1| 397|Apis mellifera stargazin related
protein STG-1 protein.
Length = 397
Score = 24.2 bits (50), Expect = 1.7
Identities = 13/31 (41%), Positives = 13/31 (41%), Gaps = 2/31 (6%)
Frame = -1
Query: 643 GXGGXGGGGXXGG--GGXGXXGGGXGGGGXG 557
G G GG G GG G GGGG G
Sbjct: 21 GPGSSSAGGVVTGASGGSIVVGANNGGGGGG 51
Score = 21.8 bits (44), Expect = 9.2
Identities = 9/21 (42%), Positives = 9/21 (42%)
Frame = -1
Query: 634 GXGGGGXXGGGGXGXXGGGXG 572
G GG G G GGG G
Sbjct: 33 GASGGSIVVGANNGGGGGGLG 53
>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
protein.
Length = 1370
Score = 23.4 bits (48), Expect = 3.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 564 PPPPXPPP 587
PPPP PPP
Sbjct: 1355 PPPPPPPP 1362
Score = 23.4 bits (48), Expect = 3.0
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +1
Query: 604 PPPXPPPP 627
PPP PPPP
Sbjct: 1355 PPPPPPPP 1362
>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
AbsCAM-Ig7B protein.
Length = 1923
Score = 23.0 bits (47), Expect = 4.0
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = -1
Query: 628 GGGGXXGGGGXGXXGGGXGGGGXG 557
GGG G GG G GG G
Sbjct: 1706 GGGSLAGLGGLGGLGGAAEASAAG 1729
>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
AbsCAM-Ig7A protein.
Length = 1919
Score = 23.0 bits (47), Expect = 4.0
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = -1
Query: 628 GGGGXXGGGGXGXXGGGXGGGGXG 557
GGG G GG G GG G
Sbjct: 1702 GGGSLAGLGGLGGLGGAAEASAAG 1725
>AY921573-1|AAX62923.1| 694|Apis mellifera D2-like dopamine
receptor protein.
Length = 694
Score = 21.8 bits (44), Expect = 9.2
Identities = 10/42 (23%), Positives = 22/42 (52%)
Frame = -3
Query: 287 ISCSTSLPLSSVITFXSFSPSASIPTELRIFSTSAAAGVVLP 162
++C++S+ S V++ P+A + + S A V++P
Sbjct: 156 VNCTSSIASSGVVSAGECGPAADVDEKTDANSWWALILVIVP 197
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 220,932
Number of Sequences: 438
Number of extensions: 9209
Number of successful extensions: 65
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 40
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30476628
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -