Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_L15
         (981 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_03_1479 + 30428488-30428502,30428619-30428715,30429627-304299...    30   3.2  

>06_03_1479 +
           30428488-30428502,30428619-30428715,30429627-30429904,
           30430256-30431032,30431254-30431343,30431538-30431605,
           30431696-30431789,30431902-30431961
          Length = 492

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 26/96 (27%), Positives = 36/96 (37%), Gaps = 2/96 (2%)
 Frame = -1

Query: 384 HLTLQSXPXTPXXXTPVPVR*SXTIHXPSSPXPXXLVLDXSRLXSXSTRHTQFLMRFSSX 205
           HLT       P   TPV VR S  +H   S  P  L           TR   F +  ++ 
Sbjct: 83  HLTCADFLRAPGVQTPVIVRFSTVVHERGS--PETLRDPRGFAVKFYTREGNFDLVGNNM 140

Query: 204 PSFLXSCTKPHPPKXFSFXTXPR--XQPNXKIINFY 103
           P F        P    +F   P+   Q N +I++F+
Sbjct: 141 PVFFIRDGMKFPDMVHAFKPSPKTNMQENWRIVDFF 176


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,658,780
Number of Sequences: 37544
Number of extensions: 148435
Number of successful extensions: 151
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 149
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 151
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2858396560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)