Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_L13
(1075 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 34 0.030
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 32 0.12
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 31 0.21
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 29 0.84
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 29 0.84
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 29 1.1
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 29 1.5
SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr 1|... 28 2.0
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 28 2.6
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 2.6
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 28 2.6
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 27 4.5
SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase Ppk29|Schizos... 27 4.5
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 27 4.5
SPAC9G1.10c |||inositol polyphosphate phosphatase |Schizosacchar... 27 4.5
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 23 5.9
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 34.3 bits (75), Expect = 0.030
Identities = 16/57 (28%), Positives = 18/57 (31%)
Frame = +2
Query: 872 PXAXXKKKXKXXPPPXPPPXPPXPXPXXKXKNXQTXPAGGXXXXXXPPPXPXPPPPP 1042
P + P P PP PP P + P G PP P PP P
Sbjct: 404 PPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLP 460
Score = 30.7 bits (66), Expect = 0.37
Identities = 15/48 (31%), Positives = 17/48 (35%)
Frame = +3
Query: 906 PPPPXPPPXPPXPXPXXXKKTXKHXPPXXAXXXPPXPLXPXPPXPPXS 1049
P PP PP P P T + PP + P P P P S
Sbjct: 352 PLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRS 399
Score = 29.9 bits (64), Expect = 0.64
Identities = 15/45 (33%), Positives = 15/45 (33%)
Frame = +2
Query: 908 PPPXPPPXPPXPXPXXKXKNXQTXPAGGXXXXXXPPPXPXPPPPP 1042
PP P P P PAG PP P PPP P
Sbjct: 436 PPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 28.7 bits (61), Expect = 1.5
Identities = 18/66 (27%), Positives = 20/66 (30%), Gaps = 4/66 (6%)
Frame = +2
Query: 857 SXXPRPXAXXKKKXKXXPPPXPPPX----PPXPXPXXKXKNXQTXPAGGXXXXXXPPPXP 1024
S P P PPP PP P P ++ P G PP P
Sbjct: 359 SAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVP 418
Query: 1025 XPPPPP 1042
PP P
Sbjct: 419 TPPSLP 424
Score = 27.5 bits (58), Expect = 3.4
Identities = 16/50 (32%), Positives = 17/50 (34%), Gaps = 5/50 (10%)
Frame = +3
Query: 909 PPPXPPPXPPX-----PXPXXXKKTXKHXPPXXAXXXPPXPLXPXPPXPP 1043
PP PP PP P + PP A PL P P PP
Sbjct: 428 PPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPP 477
Score = 27.1 bits (57), Expect = 4.5
Identities = 19/52 (36%), Positives = 20/52 (38%), Gaps = 6/52 (11%)
Frame = +3
Query: 906 PP--PPXPPP-XPPXPXPXXXKKTXKHXP-PXXAXXXPPXP--LXPXPPXPP 1043
PP PP PP PP P P P A PP P + PP PP
Sbjct: 420 PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPP 471
Score = 26.6 bits (56), Expect = 6.0
Identities = 19/60 (31%), Positives = 20/60 (33%), Gaps = 10/60 (16%)
Frame = +3
Query: 900 KXPPPPXPPP-----XPPXPXPXXXKKTXKHXPPXXAXXXPPXPLXP-----XPPXPPXS 1049
K PPPP PP PP PP + PL P PP PP S
Sbjct: 309 KRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRS 368
Score = 26.6 bits (56), Expect = 6.0
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = +2
Query: 935 PXPXPXXKXKNXQTXPAGGXXXXXXPPPXPXPPPPP 1042
P P P +N P G PP PPPPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPP---PPPPP 343
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 32.3 bits (70), Expect = 0.12
Identities = 18/46 (39%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = +3
Query: 909 PPPXPPPXP-PXPXPXXXKKTXKHXPPXXAXXXPPXPLXPXPPXPP 1043
P P P P P P P P PP A PP P PP PP
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP----PPPPP 783
Score = 30.3 bits (65), Expect = 0.48
Identities = 17/52 (32%), Positives = 17/52 (32%), Gaps = 4/52 (7%)
Frame = +3
Query: 900 KXPPPPXP----PPXPPXPXPXXXKKTXKHXPPXXAXXXPPXPLXPXPPXPP 1043
K PPPP P P P P P PP P PP PP
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 30.3 bits (65), Expect = 0.48
Identities = 20/60 (33%), Positives = 20/60 (33%)
Frame = +2
Query: 857 SXXPRPXAXXKKKXKXXPPPXPPPXPPXPXPXXKXKNXQTXPAGGXXXXXXPPPXPXPPP 1036
S P P A P P PPP P P AG PPP P PPP
Sbjct: 731 SPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAG-------PPPPPPPPP 783
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||Manual
Length = 309
Score = 31.5 bits (68), Expect = 0.21
Identities = 19/64 (29%), Positives = 22/64 (34%), Gaps = 2/64 (3%)
Frame = +2
Query: 857 SXXPRPXAXXKKKXKXXP-PPXPPPXPPX-PXPXXKXKNXQTXPAGGXXXXXXPPPXPXP 1030
S PRP P P PP P P P ++ P+ PP P
Sbjct: 142 SAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKV 201
Query: 1031 PPPP 1042
PPPP
Sbjct: 202 PPPP 205
Score = 27.9 bits (59), Expect = 2.6
Identities = 18/59 (30%), Positives = 21/59 (35%), Gaps = 5/59 (8%)
Frame = +3
Query: 882 PXKKKXKXPPPPXPPPXP--PXPXPXXXKKTXKHXPPXXAXXXPP-XPLXP--XPPXPP 1043
P + + PP PP P P P P PP + PP P P PP P
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAP 188
Score = 27.1 bits (57), Expect = 4.5
Identities = 17/59 (28%), Positives = 19/59 (32%)
Frame = +2
Query: 866 PRPXAXXKKKXKXXPPPXPPPXPPXPXPXXKXKNXQTXPAGGXXXXXXPPPXPXPPPPP 1042
P A + + PP PP P P P PA PP P PPP
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPP---------SPASAPPIPSKAPPIPSSLPPP 174
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe|chr
2|||Manual
Length = 273
Score = 29.5 bits (63), Expect = 0.84
Identities = 17/43 (39%), Positives = 17/43 (39%)
Frame = -2
Query: 1038 GGGGXGXGGGXXXXXXPPAGXVXXFFXXXXGXGXGGXGGGXGG 910
GGG G GG P G G G GG GGG GG
Sbjct: 227 GGGPGGFEGGPGGFGGGPGGFGGGL--GGFGGGPGGFGGGPGG 267
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 29.5 bits (63), Expect = 0.84
Identities = 16/56 (28%), Positives = 16/56 (28%)
Frame = +3
Query: 882 PXKKKXKXPPPPXPPPXPPXPXPXXXKKTXKHXPPXXAXXXPPXPLXPXPPXPPXS 1049
P K PP P P P P P P P PP PP S
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPS 1195
Score = 28.3 bits (60), Expect = 2.0
Identities = 16/56 (28%), Positives = 16/56 (28%)
Frame = +3
Query: 882 PXKKKXKXPPPPXPPPXPPXPXPXXXKKTXKHXPPXXAXXXPPXPLXPXPPXPPXS 1049
P K PP P P P PP P P PP PP S
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPS 1214
Score = 28.3 bits (60), Expect = 2.0
Identities = 17/53 (32%), Positives = 17/53 (32%)
Frame = +3
Query: 882 PXKKKXKXPPPPXPPPXPPXPXPXXXKKTXKHXPPXXAXXXPPXPLXPXPPXP 1040
P K PP PPP P P PP A P P PP P
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPV-PTPSAGLPPVP 1230
Score = 26.6 bits (56), Expect = 6.0
Identities = 16/48 (33%), Positives = 16/48 (33%)
Frame = +3
Query: 906 PPPPXPPPXPPXPXPXXXKKTXKHXPPXXAXXXPPXPLXPXPPXPPXS 1049
P P P PP P P K P A P P PP P S
Sbjct: 1074 PSIPAPSGAPPVPAPSGIPPVPK---PSVAAPPVPKPSVAVPPVPAPS 1118
Score = 26.2 bits (55), Expect = 7.9
Identities = 15/49 (30%), Positives = 16/49 (32%), Gaps = 1/49 (2%)
Frame = +3
Query: 906 PPPPXPPPXPPXPXPXXXKKTXKHXPPXXAXXXP-PXPLXPXPPXPPXS 1049
PP P P PP P P K + P P P P P S
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPS 1080
Score = 26.2 bits (55), Expect = 7.9
Identities = 18/55 (32%), Positives = 18/55 (32%), Gaps = 7/55 (12%)
Frame = +3
Query: 906 PPPPXPPPXPPXPXPXXX------KKTXKHXPPXXAXXXP-PXPLXPXPPXPPXS 1049
PP P P PP P P T P A P P P PP P S
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAPS 1243
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 29.1 bits (62), Expect = 1.1
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = +3
Query: 882 PXKKKXKXPPPPXPPPXPPXPXPXXXKKTXKHXPPXXAXXXPPXP 1016
P PPPP P PP P PP A P P
Sbjct: 1700 PQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 28.7 bits (61), Expect = 1.5
Identities = 13/29 (44%), Positives = 14/29 (48%), Gaps = 2/29 (6%)
Frame = +3
Query: 906 PPPPX--PPPXPPXPXPXXXKKTXKHXPP 986
PPPP PP PP P P K K+ P
Sbjct: 13 PPPPGFEPPSQPPPPPPPGYVKKRKNKTP 41
Score = 28.3 bits (60), Expect = 2.0
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +2
Query: 473 PPPPPPXXGXKKKKKXXPPXLP 538
PPPPPP G + + PP P
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.5 bits (58), Expect = 3.4
Identities = 11/24 (45%), Positives = 12/24 (50%)
Frame = +2
Query: 458 FXXXXPPPPPPXXGXKKKKKXXPP 529
F PPPPP G KK+K P
Sbjct: 18 FEPPSQPPPPPPPGYVKKRKNKTP 41
Score = 26.6 bits (56), Expect = 6.0
Identities = 11/26 (42%), Positives = 12/26 (46%)
Frame = +2
Query: 911 PPXPPPXPPXPXPXXKXKNXQTXPAG 988
PP PP PP P K KN +G
Sbjct: 20 PPSQPPPPPPPGYVKKRKNKTPAQSG 45
>SPAC20G4.02c |fus1||formin Fus1|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1372
Score = 28.3 bits (60), Expect = 2.0
Identities = 11/16 (68%), Positives = 11/16 (68%), Gaps = 1/16 (6%)
Frame = +3
Query: 900 KXPPP-PXPPPXPPXP 944
K PPP P PPP PP P
Sbjct: 804 KAPPPAPLPPPAPPLP 819
Score = 26.6 bits (56), Expect = 6.0
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +2
Query: 1010 PPPXPXPPPPPXL 1048
PPP P PPP P L
Sbjct: 806 PPPAPLPPPAPPL 818
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 331
Score = 27.9 bits (59), Expect = 2.6
Identities = 15/44 (34%), Positives = 17/44 (38%)
Frame = +3
Query: 909 PPPXPPPXPPXPXPXXXKKTXKHXPPXXAXXXPPXPLXPXPPXP 1040
P P PP P P P ++ PP P PL PP P
Sbjct: 102 PLPREPPLPNEPVP---EEPLPGEPPLPDEPVPEEPLPGEPPLP 142
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.9 bits (59), Expect = 2.6
Identities = 19/58 (32%), Positives = 20/58 (34%), Gaps = 12/58 (20%)
Frame = +2
Query: 911 PPXPPPXPPXPXPXXKXKNXQTX--PAGGXXXXXXPP----------PXPXPPPPPXL 1048
PP PPP PP N +G PP P P PPPPP L
Sbjct: 189 PPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAPPPPPPPTL 246
Score = 27.5 bits (58), Expect = 3.4
Identities = 17/54 (31%), Positives = 18/54 (33%), Gaps = 9/54 (16%)
Frame = +2
Query: 908 PPPXPPPXPPXPXPXXKXKNXQT-XPAGGXXXXXXPP--------PXPXPPPPP 1042
PPP PPP P +G PP P P PPPPP
Sbjct: 189 PPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAPPPPP 242
Score = 27.1 bits (57), Expect = 4.5
Identities = 18/63 (28%), Positives = 21/63 (33%), Gaps = 6/63 (9%)
Frame = +2
Query: 872 PXAXXKKKXKXXPPPXPPPXPPXPXPXXKXKNXQTXPA------GGXXXXXXPPPXPXPP 1033
P K+ P P PPP PP P + P+ G PP P P
Sbjct: 224 PPTYTPKQADPLPAP-PPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQP 282
Query: 1034 PPP 1042
P P
Sbjct: 283 PRP 285
Score = 27.1 bits (57), Expect = 4.5
Identities = 16/49 (32%), Positives = 16/49 (32%), Gaps = 3/49 (6%)
Frame = +3
Query: 906 PPPPXPPPXPPXPXPXXXKKTXKHXPPXXA--XXXPPXPLXP-XPPXPP 1043
PPPP PP PP PP P P PP PP
Sbjct: 238 PPPPPPPTLPPQSTNTSQLPMPSRNVNNLGSQVNIPPPPATPSQPPRPP 286
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 27.9 bits (59), Expect = 2.6
Identities = 15/47 (31%), Positives = 16/47 (34%), Gaps = 4/47 (8%)
Frame = +2
Query: 914 PXPPPXPPXPXP----XXKXKNXQTXPAGGXXXXXXPPPXPXPPPPP 1042
P PPP PP P + A P P PPPPP
Sbjct: 905 PTPPPPPPLPVKTSLNTFSHPDSVNIVANDTSVAGVMPAFPPPPPPP 951
Score = 26.6 bits (56), Expect = 6.0
Identities = 17/49 (34%), Positives = 18/49 (36%), Gaps = 8/49 (16%)
Frame = +2
Query: 920 PPPXPPXPXPXXKXKNXQTXP------AGGXXXXXXPP--PXPXPPPPP 1042
P P PP P P N + P A P P P PPPPP
Sbjct: 905 PTPPPPPPLPVKTSLNTFSHPDSVNIVANDTSVAGVMPAFPPPPPPPPP 953
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/42 (28%), Positives = 15/42 (35%)
Frame = +3
Query: 906 PPPPXPPPXPPXPXPXXXKKTXKHXPPXXAXXXPPXPLXPXP 1031
PPP P P P + +H PP P + P P
Sbjct: 209 PPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 250
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/42 (28%), Positives = 15/42 (35%)
Frame = +3
Query: 906 PPPPXPPPXPPXPXPXXXKKTXKHXPPXXAXXXPPXPLXPXP 1031
PPP P P P + +H PP P + P P
Sbjct: 222 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 263
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/42 (28%), Positives = 15/42 (35%)
Frame = +3
Query: 906 PPPPXPPPXPPXPXPXXXKKTXKHXPPXXAXXXPPXPLXPXP 1031
PPP P P P + +H PP P + P P
Sbjct: 235 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 276
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/42 (28%), Positives = 15/42 (35%)
Frame = +3
Query: 906 PPPPXPPPXPPXPXPXXXKKTXKHXPPXXAXXXPPXPLXPXP 1031
PPP P P P + +H PP P + P P
Sbjct: 248 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 289
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/42 (28%), Positives = 15/42 (35%)
Frame = +3
Query: 906 PPPPXPPPXPPXPXPXXXKKTXKHXPPXXAXXXPPXPLXPXP 1031
PPP P P P + +H PP P + P P
Sbjct: 261 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 302
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/42 (28%), Positives = 15/42 (35%)
Frame = +3
Query: 906 PPPPXPPPXPPXPXPXXXKKTXKHXPPXXAXXXPPXPLXPXP 1031
PPP P P P + +H PP P + P P
Sbjct: 274 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 315
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/42 (28%), Positives = 15/42 (35%)
Frame = +3
Query: 906 PPPPXPPPXPPXPXPXXXKKTXKHXPPXXAXXXPPXPLXPXP 1031
PPP P P P + +H PP P + P P
Sbjct: 287 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 328
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/42 (28%), Positives = 15/42 (35%)
Frame = +3
Query: 906 PPPPXPPPXPPXPXPXXXKKTXKHXPPXXAXXXPPXPLXPXP 1031
PPP P P P + +H PP P + P P
Sbjct: 300 PPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPP 341
>SPBC557.04 |ppk29||Ark1/Prk1 family protein kinase
Ppk29|Schizosaccharomyces pombe|chr 2|||Manual
Length = 872
Score = 27.1 bits (57), Expect = 4.5
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +2
Query: 920 PPPXPPXPXPXXKXKNXQTXP 982
PPP PP P P N T P
Sbjct: 356 PPPPPPMPAPIYNVPNVPTVP 376
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 27.1 bits (57), Expect = 4.5
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = -1
Query: 1042 GGXGGXGXRGXGGXXXAXXGGXCLXVFXFXXGXGXGGXGGGXGGGGXFXF 893
G G G RG G GG F G GG GGG GG F
Sbjct: 136 GRGGRGGFRGGRGGSRGGFGGNSRGGFG---GGSRGGFGGGSRGGSRGGF 182
>SPAC9G1.10c |||inositol polyphosphate phosphatase
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1191
Score = 27.1 bits (57), Expect = 4.5
Identities = 12/42 (28%), Positives = 15/42 (35%)
Frame = +2
Query: 908 PPPXPPPXPPXPXPXXKXKNXQTXPAGGXXXXXXPPPXPXPP 1033
PPP P P PP P + + + P P PP
Sbjct: 269 PPPIPSPRPPQPVAVEAIQQSRAVISQQLPLHVSPRKPPKPP 310
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 23.4 bits (48), Expect(2) = 5.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = +3
Query: 906 PPPPXPPP 929
PPPP PPP
Sbjct: 306 PPPPPPPP 313
Score = 21.4 bits (43), Expect(2) = 5.9
Identities = 8/21 (38%), Positives = 10/21 (47%)
Frame = +3
Query: 921 PPPXPPXPXPXXXKKTXKHXP 983
PPP PP P K + + P
Sbjct: 307 PPPPPPPPSNDFWKDSNEPAP 327
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,487,954
Number of Sequences: 5004
Number of extensions: 40872
Number of successful extensions: 498
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 55
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 271
length of database: 2,362,478
effective HSP length: 74
effective length of database: 1,992,182
effective search space used: 563787506
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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