Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_L06
(880 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_05_1074 + 30168065-30168577 35 0.099
07_03_0446 - 18285132-18285221,18285437-18285499,18285805-182858... 33 0.23
10_07_0039 - 12269928-12270103,12270871-12271015,12271066-122710... 33 0.30
12_02_0674 - 21745321-21746223,21746229-21747608 33 0.40
08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,322... 33 0.40
06_03_1310 + 29238644-29240260 31 1.2
08_01_0706 - 6235817-6235988,6236028-6236338,6236421-6236627,623... 30 2.1
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 30 2.1
01_06_0789 - 32010131-32010330,32010438-32010866,32011658-320117... 30 2.1
04_04_0368 + 24741755-24741970,24742415-24742811,24742892-247431... 30 2.8
02_01_0302 - 2021221-2023305 30 2.8
09_03_0040 + 11816056-11819069,11819837-11820428 29 4.9
07_03_1387 + 26202975-26203274,26203363-26203449,26203541-262036... 29 4.9
05_03_0014 - 7372231-7372984,7373065-7373120,7375012-7375335 29 4.9
02_02_0403 - 9866122-9867231 29 4.9
03_01_0381 - 2960533-2960805 29 6.5
01_03_0303 + 14792842-14792949,14793659-14793760,14794657-147948... 29 6.5
04_04_0265 + 24040689-24041051,24041210-24041457,24041845-240423... 28 8.6
03_06_0614 - 35099225-35099461,35099545-35099694,35099919-351000... 28 8.6
02_01_0409 - 2978104-2978642,2979106-2979931,2980112-2982178 28 8.6
02_01_0384 - 2781362-2782299,2782320-2782428 28 8.6
>03_05_1074 + 30168065-30168577
Length = 170
Score = 34.7 bits (76), Expect = 0.099
Identities = 27/71 (38%), Positives = 33/71 (46%), Gaps = 3/71 (4%)
Frame = -1
Query: 538 LHAAAQQRPQRLQHRAARLVRVEVADECDSDGPRVVP--VGVRADVQPAGALVHLAVTSH 365
L AA ++RP + + AA VR A D DGP V P AD + AG + T
Sbjct: 95 LPAAMRRRPLQAEEMAALAVRASAALVGDHDGPLVFPEAAASAADPRAAGKGCRRSRTRR 154
Query: 364 QERGSD-VPVL 335
RG D VP L
Sbjct: 155 HSRGRDFVPDL 165
>07_03_0446 -
18285132-18285221,18285437-18285499,18285805-18285867,
18286079-18286129,18286413-18286506,18286696-18286856,
18287089-18287145,18287380-18287493,18287934-18287999,
18288063-18288266,18289207-18289284,18289669-18289788,
18290425-18290491,18290635-18290735,18290820-18290936,
18292024-18292107,18292181-18292309,18292385-18292510,
18292622-18292696,18292814-18292947,18293032-18293137,
18293220-18293276,18294387-18294573,18295244-18295407,
18296129-18296353,18296538-18296744,18297043-18297375,
18297604-18297993
Length = 1220
Score = 33.5 bits (73), Expect = 0.23
Identities = 13/19 (68%), Positives = 16/19 (84%)
Frame = -3
Query: 323 CGWSGYSAPAPRSQRPSCR 267
CG+ GYS PAP++ RPSCR
Sbjct: 63 CGY-GYSTPAPKAPRPSCR 80
>10_07_0039 -
12269928-12270103,12270871-12271015,12271066-12271094,
12271394-12271478
Length = 144
Score = 33.1 bits (72), Expect = 0.30
Identities = 13/24 (54%), Positives = 15/24 (62%)
Frame = +1
Query: 196 DPGARVVPGAAREPRHRPAHSHTL 267
D G R VPG + PRHRP H T+
Sbjct: 81 DGGRRAVPGQSTVPRHRPRHDPTI 104
>12_02_0674 - 21745321-21746223,21746229-21747608
Length = 760
Score = 32.7 bits (71), Expect = 0.40
Identities = 43/172 (25%), Positives = 67/172 (38%), Gaps = 3/172 (1%)
Frame = -2
Query: 618 ELPAXGSQRPMSCRCAXTR*SPARWPRSTPQRSSDRSASSIAPLGSSVLKLPMNATPMDL 439
++P+ P+S T +P+ P ST S S S +PL SS +K+P A +L
Sbjct: 571 KIPSTTCTSPLSTATGKTSSTPSTSPLST-STSKTSSTPSTSPLSSSTIKIPTTARTGEL 629
Query: 438 ELYP*VCAPTCSQPEPSYTLPLPPTRNEGPMSQ-YCKASMWLVWIFRTSSSQPASVLQKG 262
PT P + L ++ P + + S I TS + S G
Sbjct: 630 S------TPTDKIPTTTRAGDLSTATSKIPTAPGTSELSTTTSKISSTSCAGQFSTSTYG 683
Query: 261 VTVCWTMTRLTGRARYDTCTGIKPSHC--FLLTTSQSAAISVRSELRASAST 112
+ ++LT +C P+ F +TS S ++L AS ST
Sbjct: 684 IPTTTCTSKLTA----SSCKVSSPTGACKFSTSTSTFTPTSFSNDLTASTST 731
>08_01_0364 - 3218309-3218414,3218882-3218941,3219898-3219969,
3220080-3223195,3223303-3223561,3223665-3223951,
3224029-3224364,3224463-3224604,3224690-3224910,
3224990-3225151,3225242-3225400,3225488-3225787,
3226306-3226569,3227370-3227453
Length = 1855
Score = 32.7 bits (71), Expect = 0.40
Identities = 35/114 (30%), Positives = 49/114 (42%)
Frame = -2
Query: 666 SPXFSSHSGPGWYLVVELPAXGSQRPMSCRCAXTR*SPARWPRSTPQRSSDRSASSIAPL 487
SP +S S PG+ P S P S + T SP+ P S+ + S + S +P
Sbjct: 1715 SPAYSPTS-PGYS-----PTSPSYSPTSPNYSPT--SPSYNP-SSAKYSPSHAYSPSSPR 1765
Query: 486 GSSVLKLPMNATPMDLELYP*VCAPTCSQPEPSYTLPLPPTRNEGPMSQYCKAS 325
S + N +P P +P+ SQP PSY+ P T + GP Y S
Sbjct: 1766 LSPYSQTSPNYSPTSPTYSP--TSPSYSQPSPSYSPTSPYTTSGGPSPDYSPTS 1817
>06_03_1310 + 29238644-29240260
Length = 538
Score = 31.1 bits (67), Expect = 1.2
Identities = 27/93 (29%), Positives = 38/93 (40%), Gaps = 2/93 (2%)
Frame = -2
Query: 615 LPAXGSQRPMSCRCAXTR*SPARWPRSTPQRS--SDRSASSIAPLGSSVLKLPMNATPMD 442
+P +QRP + +CA P ++ Q + + R PL LP + P
Sbjct: 335 IPGAPAQRPPA-QCAAAAAHPFDCSKAQCQATPPTTRRPGGRTPLAPHRSPLPHHMPPRR 393
Query: 441 LELYP*VCAPTCSQPEPSYTLPLPPTRNEGPMS 343
P P S P PS+ P PPT +E P S
Sbjct: 394 TPPTP----PPPSSPTPSHLPPPPPTYSESPKS 422
>08_01_0706 -
6235817-6235988,6236028-6236338,6236421-6236627,
6236718-6236889,6236994-6237249,6238015-6238073,
6238693-6238782,6238869-6239013,6239598-6239712,
6240690-6240701
Length = 512
Score = 30.3 bits (65), Expect = 2.1
Identities = 25/102 (24%), Positives = 49/102 (48%), Gaps = 7/102 (6%)
Frame = +2
Query: 281 AGCEELVRNIQTNHMEALQYWDIGPSFL---VGGNGKVYEGSGWLHVGAHTYGYNSRSIG 451
AG + ++ + E++ + G SF+ +GG G+++ G W + Y S S
Sbjct: 365 AGVRTITGSVTAHARESVDD-NTGYSFVNCSIGGTGRIWLGRAWRPYSTVVFAYTSMSDI 423
Query: 452 VAFIGNFNTDEPS----GAMLEALRSLLRCGVERGHLAGDYR 565
+A G + ++PS + L ++ S++ C +R G+YR
Sbjct: 424 IASEGWNDWNDPSRDQYASSLYSV-SIVTCMTKRTVFYGEYR 464
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 30.3 bits (65), Expect = 2.1
Identities = 23/83 (27%), Positives = 36/83 (43%)
Frame = -2
Query: 300 TSSSQPASVLQKGVTVCWTMTRLTGRARYDTCTGIKPSHCFLLTTSQSAAISVRSELRAS 121
TS+S A++ + T RL + + +PS ++ +S S RS LRAS
Sbjct: 35 TSASASAAMQMQAATTTTAARRLAPKPQ-PQANRCRPSSVSVVAAGRSRRRSARSSLRAS 93
Query: 120 ASTTAEWRRAMSRSGACQHVSTR 52
AS E + S + +TR
Sbjct: 94 ASLDQEVKERASPAAGKSGQATR 116
>01_06_0789 -
32010131-32010330,32010438-32010866,32011658-32011752,
32011836-32011933,32012586-32012942,32013615-32013792,
32013856-32013936,32014441-32014548,32014916-32015178
Length = 602
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/56 (35%), Positives = 28/56 (50%), Gaps = 1/56 (1%)
Frame = -1
Query: 442 PRVVPVGVRADVQPAGALVHLAVTSHQE-RGSDVPVLQGLHVVGLDIPHQLLAASV 278
PR VPVG QP HL V Q+ +PV++ HVV + +P +A +V
Sbjct: 14 PRAVPVGFP---QPQQLRAHLPVGVPQQLHPRGLPVMRSHHVVHVPLPRPAVAVAV 66
>04_04_0368 +
24741755-24741970,24742415-24742811,24742892-24743187,
24743860-24744096
Length = 381
Score = 29.9 bits (64), Expect = 2.8
Identities = 18/60 (30%), Positives = 25/60 (41%), Gaps = 5/60 (8%)
Frame = +1
Query: 199 PGARVVPGAAREPRHRPAHSHTL-----LQDGRWLRGAGAEYPDQPHGGLAILGHRTLVP 363
P + P A P HR HSH + G G P++ HG LA++ L+P
Sbjct: 178 PEGNLPPSDATLPMHRSMHSHAFNYTSGMASSSGGSGGGGFPPERKHGLLAMMAWGVLMP 237
>02_01_0302 - 2021221-2023305
Length = 694
Score = 29.9 bits (64), Expect = 2.8
Identities = 26/89 (29%), Positives = 37/89 (41%), Gaps = 3/89 (3%)
Frame = -2
Query: 615 LPAXGSQRPMSCRCAXTR*SPARWPRSTPQRSSDRSASSIAP-LGSSVLKLPMNATPMDL 439
+P QRP S +CA P ++ Q +S +P G P+++ P
Sbjct: 353 IPGAPGQRPPS-QCAAAAAHPFDCSKAQCQAASYTPTPGGSPGRGGQGPPAPVSSPPRRR 411
Query: 438 ELYP*V--CAPTCSQPEPSYTLPLPPTRN 358
YP +PT S P PS + P PP N
Sbjct: 412 GPYPQPPSSSPTPSYPSPSSSYPAPPGSN 440
>09_03_0040 + 11816056-11819069,11819837-11820428
Length = 1201
Score = 29.1 bits (62), Expect = 4.9
Identities = 12/29 (41%), Positives = 21/29 (72%)
Frame = -2
Query: 525 RSSDRSASSIAPLGSSVLKLPMNATPMDL 439
R R+AS++A G+S+ +LP+ ATP+ +
Sbjct: 301 RDCGRAASTLAESGASMEELPLEATPISV 329
>07_03_1387 +
26202975-26203274,26203363-26203449,26203541-26203648,
26203708-26203980,26205242-26205355,26205900-26206268
Length = 416
Score = 29.1 bits (62), Expect = 4.9
Identities = 18/60 (30%), Positives = 21/60 (35%), Gaps = 5/60 (8%)
Frame = +3
Query: 291 RSWCGISRPTTWRPCNTGTSD-----PRSWWEVTARCTRAPAGCTSARTPTGTTRGPSES 455
R W SR + R C+ + P WW AR RAP A PS S
Sbjct: 20 RPWTAASRGVSARRCSVAPAQVRARGPTEWWPAAARRRRAPRRHAVAAKAGAADARPSSS 79
>05_03_0014 - 7372231-7372984,7373065-7373120,7375012-7375335
Length = 377
Score = 29.1 bits (62), Expect = 4.9
Identities = 17/37 (45%), Positives = 21/37 (56%)
Frame = -1
Query: 226 PRQVRHVHRDQTVPLLFTDDVAIGCYFCEKRAESERE 116
P+ VR V R +TVP+ +TD A G EK E E E
Sbjct: 120 PKFVR-VLRPKTVPIRYTDTFASGTVALEKELEKEFE 155
>02_02_0403 - 9866122-9867231
Length = 369
Score = 29.1 bits (62), Expect = 4.9
Identities = 24/72 (33%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Frame = +1
Query: 82 PRHGPPPLGSCTRARSQLASHRNSSRLRRRQ*KAMGR-FDPGARVVPGAAREPRHRPAHS 258
P+H PL R+ S + R RRRQ +AM R F G +V G R A +
Sbjct: 297 PQHPVVPLSDDDRSDSPELPPESVPRRRRRQWRAMPRDFSHGRALVHGGHNNQRRGGAGA 356
Query: 259 -HTLLQDGRWLR 291
H+ RW R
Sbjct: 357 VHSPSSRYRWSR 368
>03_01_0381 - 2960533-2960805
Length = 90
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/34 (41%), Positives = 18/34 (52%)
Frame = -1
Query: 217 VRHVHRDQTVPLLFTDDVAIGCYFCEKRAESERE 116
+R R +TVP+ +TD A G EK E E E
Sbjct: 1 MRRSQRPKTVPIRYTDTFASGTIALEKELEKEFE 34
>01_03_0303 +
14792842-14792949,14793659-14793760,14794657-14794800,
14794906-14794986,14795078-14795147,14795267-14795337,
14795427-14795594,14796030-14796074,14796449-14796511,
14796594-14796869,14797858-14797971,14798099-14798225,
14798315-14798484,14798743-14798841,14799577-14799630,
14801487-14801522,14801741-14801844,14801952-14802186,
14802377-14802609,14802846-14803346,14803422-14803716,
14805796-14805881,14806952-14807064,14807303-14807385,
14808014-14808866,14809215-14809364,14809963-14811146
Length = 1854
Score = 28.7 bits (61), Expect = 6.5
Identities = 14/46 (30%), Positives = 24/46 (52%), Gaps = 1/46 (2%)
Frame = -2
Query: 351 PMSQYCKASMWLVWIFRTSSSQPASV-LQKGVTVCWTMTRLTGRAR 217
P+ +YC +W +WI ++ QP V Q+ + W+ GRA+
Sbjct: 816 PLVKYCPPELWRMWI--SNLLQPLFVHCQQALDFSWSSLLREGRAK 859
>04_04_0265 +
24040689-24041051,24041210-24041457,24041845-24042365,
24042433-24042968
Length = 555
Score = 28.3 bits (60), Expect = 8.6
Identities = 11/32 (34%), Positives = 18/32 (56%)
Frame = -2
Query: 153 AISVRSELRASASTTAEWRRAMSRSGACQHVS 58
A+S+R+ELR +A+W + M R H +
Sbjct: 185 AMSLRNELRGPRQNSADWYKYMQRGAEAVHAA 216
>03_06_0614 -
35099225-35099461,35099545-35099694,35099919-35100066,
35100152-35100231,35100428-35100594,35100692-35100940,
35101025-35102310,35102423-35102544,35102946-35103272
Length = 921
Score = 28.3 bits (60), Expect = 8.6
Identities = 20/49 (40%), Positives = 25/49 (51%)
Frame = -2
Query: 375 LPPTRNEGPMSQYCKASMWLVWIFRTSSSQPASVLQKGVTVCWTMTRLT 229
LP T + G S K S + R SSS +S +QK V+VC T T T
Sbjct: 381 LPRTGHSGRSSGGSKRSFGAKGLIRRSSSF-SSDIQKDVSVCTTTTEQT 428
>02_01_0409 - 2978104-2978642,2979106-2979931,2980112-2982178
Length = 1143
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/21 (57%), Positives = 13/21 (61%)
Frame = +1
Query: 94 PPPLGSCTRARSQLASHRNSS 156
PP LGSC+R R A H N S
Sbjct: 221 PPELGSCSRLRVLKAGHNNLS 241
>02_01_0384 - 2781362-2782299,2782320-2782428
Length = 348
Score = 28.3 bits (60), Expect = 8.6
Identities = 19/61 (31%), Positives = 26/61 (42%)
Frame = +1
Query: 82 PRHGPPPLGSCTRARSQLASHRNSSRLRRRQ*KAMGRFDPGARVVPGAAREPRHRPAHSH 261
P PLG CT A LA+ +S+ + A G G+ +P A PR P +
Sbjct: 143 PSSTSAPLGPCTLAHEGLAAVLATSKAASKSEAASG----GSSAIPPPATAPRFPPPRAM 198
Query: 262 T 264
T
Sbjct: 199 T 199
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,608,297
Number of Sequences: 37544
Number of extensions: 529722
Number of successful extensions: 2259
Number of sequences better than 10.0: 21
Number of HSP's better than 10.0 without gapping: 2134
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2257
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2479731924
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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