Bombyx BLAST Result against uniref50

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_L05
         (885 letters)

Database: uniref50 
           1,657,284 sequences; 575,637,011 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

UniRef50_P48821 Cluster: Antibacterial peptide enbocin precursor...    37   0.79 
UniRef50_A6S9A3 Cluster: Predicted protein; n=1; Botryotinia fuc...    34   4.2  

>UniRef50_P48821 Cluster: Antibacterial peptide enbocin precursor;
           n=5; Ditrysia|Rep: Antibacterial peptide enbocin
           precursor - Bombyx mori (Silk moth)
          Length = 59

 Score = 36.7 bits (81), Expect = 0.79
 Identities = 16/20 (80%), Positives = 18/20 (90%)
 Frame = +3

Query: 165 PGNFFKDLERAVARTRDAVI 224
           P N FK++ERAVARTRDAVI
Sbjct: 22  PWNIFKEIERAVARTRDAVI 41


>UniRef50_A6S9A3 Cluster: Predicted protein; n=1; Botryotinia
           fuckeliana B05.10|Rep: Predicted protein - Botryotinia
           fuckeliana B05.10
          Length = 90

 Score = 34.3 bits (75), Expect = 4.2
 Identities = 17/48 (35%), Positives = 27/48 (56%)
 Frame = +1

Query: 415 DTNGMSSGFVLFDQVSSRSQIALYISRIQIFQKYILIMYSVSYSNSSV 558
           DT+G   G   +DQV + SQ A+    +++F+K  L   S+ +SN  V
Sbjct: 13  DTSGNGDGLQHYDQVCAISQAAINRGFVKLFEKQPLAARSIHWSNEDV 60


  Database: uniref50
    Posted date:  Oct 5, 2007 11:19 AM
  Number of letters in database: 575,637,011
  Number of sequences in database:  1,657,284
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 538,699,456
Number of Sequences: 1657284
Number of extensions: 8924488
Number of successful extensions: 20287
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 19804
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20279
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79522270534
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)