Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_L04
(849 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q00802 Cluster: Low molecular mass 30 kDa lipoprotein 1... 301 1e-80
UniRef50_P19616 Cluster: Microvitellogenin precursor; n=3; Mandu... 152 1e-35
UniRef50_P09335 Cluster: Low molecular 30 kDa lipoprotein PBMHP-... 148 2e-34
UniRef50_Q75RW3 Cluster: BmLSP-T; n=2; Bombyx mori|Rep: BmLSP-T ... 146 6e-34
UniRef50_P09334 Cluster: Low molecular 30 kDa lipoprotein PBMHP-... 136 7e-31
UniRef50_Q2PQU4 Cluster: Putative paralytic peptide-binding prot... 125 1e-27
UniRef50_Q76IB6 Cluster: Growth blocking peptide binding protein... 87 5e-16
UniRef50_Q8I5T7 Cluster: Minichromosome maintenance protein, put... 35 2.2
UniRef50_UPI000049A2B0 Cluster: hypothetical protein 95.t00004; ... 34 3.9
UniRef50_Q9FLK1 Cluster: Cytochrome P450-like protein; n=2; Arab... 34 3.9
UniRef50_Q0RIK6 Cluster: Putative Serine/threonine protein kinas... 33 6.9
UniRef50_A7AI93 Cluster: Putative uncharacterized protein; n=1; ... 33 6.9
UniRef50_O80740 Cluster: T13D8.6 protein; n=12; Magnoliophyta|Re... 33 6.9
UniRef50_Q1A0R2 Cluster: Gp17; n=2; unclassified Siphoviridae|Re... 33 6.9
UniRef50_Q7NRP8 Cluster: Putative uncharacterized protein; n=1; ... 33 9.1
UniRef50_Q7RI40 Cluster: Putative uncharacterized protein PY0379... 33 9.1
>UniRef50_Q00802 Cluster: Low molecular mass 30 kDa lipoprotein 19G1
precursor; n=3; Bombyx mori|Rep: Low molecular mass 30
kDa lipoprotein 19G1 precursor - Bombyx mori (Silk moth)
Length = 256
Score = 301 bits (739), Expect = 1e-80
Identities = 144/168 (85%), Positives = 146/168 (86%)
Frame = +2
Query: 344 SKDIVRDCFPVEFRLIFAENAIKLMYKRDGLALTLSNDVQGDDGRPAYGDGKDKTSPRVS 523
SKDIVRDCFPVEFRLIFAENAIKLMYKRDGLALTLSNDVQGDDGRP YGDGKDKTSPRVS
Sbjct: 86 SKDIVRDCFPVEFRLIFAENAIKLMYKRDGLALTLSNDVQGDDGRPRYGDGKDKTSPRVS 145
Query: 524 WKLIALWENNKVYFKILNTERNQYLVLGVGTNWNGXHMAFGVNSVDSFRAQWYLQPAKYD 703
WKLIALWENNKVYFKILNTERNQYLVLGVGTNWNG HMAFGVNSVDSFRAQWYLQPAKYD
Sbjct: 146 WKLIALWENNKVYFKILNTERNQYLVLGVGTNWNGDHMAFGVNSVDSFRAQWYLQPAKYD 205
Query: 704 NDVLFYIYNREYSKGF*HCRGRLSPSGSPHGLGIQRQSNPESPEHYAW 847
NDVLFYIYNREYSK R + PSG G + SPEHYAW
Sbjct: 206 NDVLFYIYNREYSKALTLSR-TVEPSGHRMAWGYNGRV-IGSPEHYAW 251
Score = 179 bits (436), Expect = 7e-44
Identities = 87/95 (91%), Positives = 88/95 (92%)
Frame = +1
Query: 88 MKPAIVILCLFVASLYAADSDVPNDILEEQLYNSVVVADYDSAVEKSKHLYEEKKSEVIT 267
MKPAIVILCLFVASLYAADSDVPNDILEEQLYNSVVVADYDSAVEKSKHLYEEKKSEVIT
Sbjct: 1 MKPAIVILCLFVASLYAADSDVPNDILEEQLYNSVVVADYDSAVEKSKHLYEEKKSEVIT 60
Query: 268 NVVNKLIRNNKMNCMEYAYQLWLQGLQGHRPGLFP 372
NVVNKLIRNNKMNCMEYAYQLWLQG + FP
Sbjct: 61 NVVNKLIRNNKMNCMEYAYQLWLQGSKDIVRDCFP 95
>UniRef50_P19616 Cluster: Microvitellogenin precursor; n=3; Manduca
sexta|Rep: Microvitellogenin precursor - Manduca sexta
(Tobacco hawkmoth) (Tobacco hornworm)
Length = 249
Score = 152 bits (368), Expect = 1e-35
Identities = 69/136 (50%), Positives = 96/136 (70%)
Frame = +2
Query: 335 SRXSKDIVRDCFPVEFRLIFAENAIKLMYKRDGLALTLSNDVQGDDGRPAYGDGKDKTSP 514
S ++DIV++ FP++FR++ E++IKL+ KRD LA+ L R AYG DKTS
Sbjct: 76 SLEARDIVKERFPIQFRMMLGEHSIKLINKRDNLAMKLGVATDNSGDRIAYGAADDKTSD 135
Query: 515 RVSWKLIALWENNKVYFKILNTERNQYLVLGVGTNWNGXHMAFGVNSVDSFRAQWYLQPA 694
RV+WK + L E+ +VYFKILN +R QYL LGV T+ +G HMA+ + D+FR QWYLQPA
Sbjct: 136 RVAWKFVPLSEDKRVYFKILNVQRGQYLKLGVETDSDGEHMAYASSGADTFRHQWYLQPA 195
Query: 695 KYDNDVLFYIYNREYS 742
K D +++F+I NREY+
Sbjct: 196 KADGNLVFFIVNREYN 211
Score = 70.1 bits (164), Expect = 6e-11
Identities = 29/54 (53%), Positives = 41/54 (75%)
Frame = +1
Query: 172 EQLYNSVVVADYDSAVEKSKHLYEEKKSEVITNVVNKLIRNNKMNCMEYAYQLW 333
+ +YN+VV+ D D AV KSK L ++ K ++IT VN+LIR+++ N MEYAYQLW
Sbjct: 22 DDIYNNVVIGDIDGAVAKSKELQKQGKGDIITEAVNRLIRDSQRNTMEYAYQLW 75
>UniRef50_P09335 Cluster: Low molecular 30 kDa lipoprotein PBMHP-12
precursor; n=5; Bombyx mori|Rep: Low molecular 30 kDa
lipoprotein PBMHP-12 precursor - Bombyx mori (Silk moth)
Length = 264
Score = 148 bits (359), Expect = 2e-34
Identities = 71/134 (52%), Positives = 91/134 (67%), Gaps = 2/134 (1%)
Frame = +2
Query: 347 KDIVRDCFPVEFRLIFAENAIKLMYKRDGLALTLSNDVQGDDGRPAYGDGKDKTSPRVSW 526
+DIV+ FP+ FRLI A N +KL+Y+ LAL L + + R AYGDG DK + VSW
Sbjct: 93 QDIVKKYFPLSFRLIMAGNYVKLIYRNYNLALKLGSTTNPSNERIAYGDGVDKHTDLVSW 152
Query: 527 KLIALWENNKVYFKILNTERNQYLVLGVGT-NWNG-XHMAFGVNSVDSFRAQWYLQPAKY 700
K I LWENN+VYFK NT+ NQYL + T N N + +G NS DS R QW+ QPAKY
Sbjct: 153 KFITLWENNRVYFKAHNTKYNQYLKMSTSTCNCNARDRVVYGGNSADSTREQWFFQPAKY 212
Query: 701 DNDVLFYIYNREYS 742
+NDVLF+IYNR+++
Sbjct: 213 ENDVLFFIYNRQFN 226
Score = 68.9 bits (161), Expect = 1e-10
Identities = 35/80 (43%), Positives = 48/80 (60%), Gaps = 1/80 (1%)
Frame = +1
Query: 136 AADSDVP-NDILEEQLYNSVVVADYDSAVEKSKHLYEEKKSEVITNVVNKLIRNNKMNCM 312
+ADS P N LE++LYNS++ DYDSAV KS + + ++ NVVN LI + + N M
Sbjct: 22 SADSMSPSNQDLEDKLYNSILTGDYDSAVRKSLEYESQGQGSIVQNVVNNLIIDKRRNTM 81
Query: 313 EYAYQLWLQGLQGHRPGLFP 372
EY Y+LW+ Q FP
Sbjct: 82 EYCYKLWVGNGQDIVKKYFP 101
>UniRef50_Q75RW3 Cluster: BmLSP-T; n=2; Bombyx mori|Rep: BmLSP-T -
Bombyx mori (Silk moth)
Length = 267
Score = 146 bits (354), Expect = 6e-34
Identities = 73/169 (43%), Positives = 101/169 (59%), Gaps = 1/169 (0%)
Frame = +2
Query: 344 SKDIVRDCFPVEFRLIFAENAIKLMYKRDGLALTLSNDVQGDDGRPAYGDGKDKTSPRVS 523
S++IV++ FPV FR IF+EN++K++ KRD LA+ L + + D+ R AYGD DKTS V+
Sbjct: 95 SQEIVKEYFPVIFRQIFSENSVKIINKRDNLAIKLGDALDSDNDRVAYGDANDKTSDNVA 154
Query: 524 WKLIALWENNKVYFKILNTERNQ-YLVLGVGTNWNGXHMAFGVNSVDSFRAQWYLQPAKY 700
WKLI LW++N+VYFKI + RNQ + + + H +G + D+ R QWYL P +
Sbjct: 155 WKLIPLWDDNRVYFKIFSVHRNQIFEIRHTYLTVDNDHGVYGDDRADTHRHQWYLNPVEL 214
Query: 701 DNDVLFYIYNREYSKGF*HCRGRLSPSGSPHGLGIQRQSNPESPEHYAW 847
+N VLFYIYNR+Y + GR S S PE YAW
Sbjct: 215 ENQVLFYIYNRQYDQAL--KLGRNVDSDGDRRAYSSSSSVEGQPELYAW 261
Score = 48.4 bits (110), Expect = 2e-04
Identities = 28/85 (32%), Positives = 44/85 (51%), Gaps = 6/85 (7%)
Frame = +1
Query: 97 AIVILCLFVASLYAA-DSDVPNDI-----LEEQLYNSVVVADYDSAVEKSKHLYEEKKSE 258
A++ LCL AS + D D I E+ + N+++ +Y++A + L
Sbjct: 5 AVLALCLVAASATPSIDGDDRYPIHAPSGYEDIVTNAIITRNYEAAASMTVQLKRRSSGR 64
Query: 259 VITNVVNKLIRNNKMNCMEYAYQLW 333
IT +VN+LIR NK N + AY+LW
Sbjct: 65 YITIIVNRLIRENKRNICDLAYKLW 89
>UniRef50_P09334 Cluster: Low molecular 30 kDa lipoprotein PBMHP-6
precursor; n=2; Bombyx mori|Rep: Low molecular 30 kDa
lipoprotein PBMHP-6 precursor - Bombyx mori (Silk moth)
Length = 256
Score = 136 bits (329), Expect = 7e-31
Identities = 61/136 (44%), Positives = 94/136 (69%)
Frame = +2
Query: 335 SRXSKDIVRDCFPVEFRLIFAENAIKLMYKRDGLALTLSNDVQGDDGRPAYGDGKDKTSP 514
++ K+IV+ FP++FR+IF E +KL+ KRD AL L + Q + + A+GD KDKTS
Sbjct: 85 TKDGKEIVKSYFPIQFRVIFTEQTVKLINKRDHHALKLID--QQNHNKIAFGDSKDKTSK 142
Query: 515 RVSWKLIALWENNKVYFKILNTERNQYLVLGVGTNWNGXHMAFGVNSVDSFRAQWYLQPA 694
+VSWK + ENN+VYFKI++TE QYL L + + +G ++ D+F+ WYL+P+
Sbjct: 143 KVSWKFTPVLENNRVYFKIMSTEDKQYLKLDNTKGSSDDRIIYGDSTADTFKHHWYLEPS 202
Query: 695 KYDNDVLFYIYNREYS 742
Y++DV+F++YNREY+
Sbjct: 203 MYESDVMFFVYNREYN 218
Score = 70.5 bits (165), Expect = 5e-11
Identities = 30/59 (50%), Positives = 41/59 (69%)
Frame = +1
Query: 157 NDILEEQLYNSVVVADYDSAVEKSKHLYEEKKSEVITNVVNKLIRNNKMNCMEYAYQLW 333
+D+L EQLY SVV+ +Y++A+ K +EKK EVI V +LI N K N M++AYQLW
Sbjct: 26 DDVLAEQLYMSVVIGEYETAIAKCSEYLKEKKGEVIKEAVKRLIENGKRNTMDFAYQLW 84
>UniRef50_Q2PQU4 Cluster: Putative paralytic peptide-binding
protein; n=1; Bombyx mori|Rep: Putative paralytic
peptide-binding protein - Bombyx mori (Silk moth)
Length = 436
Score = 125 bits (302), Expect = 1e-27
Identities = 66/134 (49%), Positives = 77/134 (57%)
Frame = +2
Query: 347 KDIVRDCFPVEFRLIFAENAIKLMYKRDGLALTLSNDVQGDDGRPAYGDGKDKTSPRVSW 526
KDIV D FP EF+LI + IKL+ AL L +V R +GDGKD TS RVSW
Sbjct: 266 KDIVEDYFPSEFQLILDQKRIKLIGNHYNQALKLDANVDRYKDRLTWGDGKDYTSYRVSW 325
Query: 527 KLIALWENNKVYFKILNTERNQYLVLGVGTNWNGXHMAFGVNSVDSFRAQWYLQPAKYDN 706
+LI+LWENN V FKILNTE YL L V + G +G N R WYL P K +
Sbjct: 326 RLISLWENNNVIFKILNTEHEMYLKLDVNVDRYGDRKTWGSNDSSEKRHTWYLYPVKVGD 385
Query: 707 DVLFYIYNREYSKG 748
LF I NREY +G
Sbjct: 386 QQLFLIENREYRQG 399
Score = 52.4 bits (120), Expect = 1e-05
Identities = 28/80 (35%), Positives = 44/80 (55%)
Frame = +1
Query: 166 LEEQLYNSVVVADYDSAVEKSKHLYEEKKSEVITNVVNKLIRNNKMNCMEYAYQLWLQGL 345
+ + LYN V DY +AV+ + L + + S V +VV++L+ N M +AY+LW +G
Sbjct: 206 INDHLYNLVTGGDYINAVKTVRSLDDNQGSGVCRDVVSRLVSQGIKNAMSFAYKLWHEGH 265
Query: 346 QGHRPGLFPS*VQTYLRRKR 405
+ FPS Q L +KR
Sbjct: 266 KDIVEDYFPSEFQLILDQKR 285
>UniRef50_Q76IB6 Cluster: Growth blocking peptide binding protein;
n=1; Mythimna separata|Rep: Growth blocking peptide
binding protein - Pseudaletia separata (Oriental
armyworm) (Mythimna separata)
Length = 430
Score = 87.0 bits (206), Expect = 5e-16
Identities = 46/139 (33%), Positives = 80/139 (57%), Gaps = 4/139 (2%)
Frame = +2
Query: 344 SKDIVRDCFPVEFRLIFAENAIKLMYKRDGLALTLSNDVQGDDGRPAYGDGKDK--TSPR 517
+K+IVR+ FP F+ IF E+A+ ++ K+ L L + + R A+GD TS R
Sbjct: 256 AKEIVRNHFPKAFQHIFNEDAVTIVNKQYQQPLKLDVNTDSMNDRLAWGDHNQCKITSER 315
Query: 518 VSWKLIALWENNKVYFKILNTERNQYLVLGVGTNWNGXHMAFGVNSVDSFRAQWYLQP-- 691
+SWK++ +W + + FK+ N RN YL L + G A+G N+ + R ++YL+P
Sbjct: 316 LSWKILPMWNRDGLTFKLYNVHRNMYLKLDASVDSMGDRQAWGSNNSNEDRHRYYLEPMI 375
Query: 692 AKYDNDVLFYIYNREYSKG 748
+ ++ ++F+I N +Y +G
Sbjct: 376 SPHNGTLVFFIINYKYGQG 394
Score = 46.4 bits (105), Expect = 0.001
Identities = 22/62 (35%), Positives = 33/62 (53%)
Frame = +1
Query: 157 NDILEEQLYNSVVVADYDSAVEKSKHLYEEKKSEVITNVVNKLIRNNKMNCMEYAYQLWL 336
N EE++YNSV+ DYD+AV ++ SE +V +L+ M +AY+LW
Sbjct: 194 NHNFEEEVYNSVINGDYDAAVNMAQSYGVASNSEFTNRIVTRLMTAFPRKLMSFAYKLWH 253
Query: 337 QG 342
G
Sbjct: 254 GG 255
>UniRef50_Q8I5T7 Cluster: Minichromosome maintenance protein,
putative; n=4; root|Rep: Minichromosome maintenance
protein, putative - Plasmodium falciparum (isolate 3D7)
Length = 1024
Score = 35.1 bits (77), Expect = 2.2
Identities = 19/56 (33%), Positives = 32/56 (57%), Gaps = 3/56 (5%)
Frame = +1
Query: 157 NDILEEQLYNSVVVADYDSAVEKSK---HLYEEKKSEVITNVVNKLIRNNKMNCME 315
N+ L+ +L SV V D + +K K +L+++K+ N++N NNK+NC E
Sbjct: 381 NNYLKNKLIESVHVEDDNEHADKKKKNTYLFKDKQDGSHHNILNSNKNNNKINCEE 436
>UniRef50_UPI000049A2B0 Cluster: hypothetical protein 95.t00004;
n=1; Entamoeba histolytica HM-1:IMSS|Rep: hypothetical
protein 95.t00004 - Entamoeba histolytica HM-1:IMSS
Length = 1518
Score = 34.3 bits (75), Expect = 3.9
Identities = 23/80 (28%), Positives = 38/80 (47%), Gaps = 3/80 (3%)
Frame = +1
Query: 94 PAIVILCLFVASLYAADSDVPNDILEEQLYNSVVVADYDSAVEKSKHLY---EEKKSEVI 264
P +V L LF+ D + NDI+ L+NS D +E+ KH+ E K ++
Sbjct: 254 PCLVELSLFLYQCDQIDIHLRNDIVSLSLFNS----SSDEVIEQIKHIIDISESVKFDLQ 309
Query: 265 TNVVNKLIRNNKMNCMEYAY 324
+++KL+R N + Y
Sbjct: 310 VTLIDKLLRMNSFKPTDSEY 329
>UniRef50_Q9FLK1 Cluster: Cytochrome P450-like protein; n=2;
Arabidopsis thaliana|Rep: Cytochrome P450-like protein -
Arabidopsis thaliana (Mouse-ear cress)
Length = 483
Score = 34.3 bits (75), Expect = 3.9
Identities = 21/52 (40%), Positives = 27/52 (51%)
Frame = +1
Query: 208 DSAVEKSKHLYEEKKSEVITNVVNKLIRNNKMNCMEYAYQLWLQGLQGHRPG 363
+ +E K LYEE KS VI K I +M M Y + L+GL+ H PG
Sbjct: 292 EDEIEIQKRLYEEIKS-VIGEEEEKEIEEEEMKKMPYLKAVVLEGLRLHPPG 342
>UniRef50_Q0RIK6 Cluster: Putative Serine/threonine protein kinase;
n=1; Frankia alni ACN14a|Rep: Putative Serine/threonine
protein kinase - Frankia alni (strain ACN14a)
Length = 687
Score = 33.5 bits (73), Expect = 6.9
Identities = 20/51 (39%), Positives = 31/51 (60%), Gaps = 1/51 (1%)
Frame = -3
Query: 556 LVVLPQS-D*LPADSRACLVLAVAVGRSAIVALNIIAQRQSETVALVHKLN 407
L V PQS D + ADS +VL V+ GRSA+ N++ + QS+ ++ + N
Sbjct: 484 LAVRPQSGDVVRADSP--VVLTVSAGRSAVAVPNVVGRSQSDAETVLRRSN 532
>UniRef50_A7AI93 Cluster: Putative uncharacterized protein; n=1;
Parabacteroides merdae ATCC 43184|Rep: Putative
uncharacterized protein - Parabacteroides merdae ATCC
43184
Length = 483
Score = 33.5 bits (73), Expect = 6.9
Identities = 19/63 (30%), Positives = 32/63 (50%), Gaps = 5/63 (7%)
Frame = +2
Query: 422 KRDGLALTLSNDVQGDDGRPAYGDGKDKTSPRVSWKLIALWE-----NNKVYFKILNTER 586
K D +AL S+ V G DG Y +G +P ++ + LW+ NN+ ++L+
Sbjct: 392 KPDAVALGTSSCVIGPDGNVRYANGTSFATPILAGMGVCLWQSLPWLNNREMIELLHRSS 451
Query: 587 NQY 595
+QY
Sbjct: 452 SQY 454
>UniRef50_O80740 Cluster: T13D8.6 protein; n=12; Magnoliophyta|Rep:
T13D8.6 protein - Arabidopsis thaliana (Mouse-ear cress)
Length = 511
Score = 33.5 bits (73), Expect = 6.9
Identities = 18/67 (26%), Positives = 32/67 (47%)
Frame = +1
Query: 73 LDAPKMKPAIVILCLFVASLYAADSDVPNDILEEQLYNSVVVADYDSAVEKSKHLYEEKK 252
+D + P+ +I+ + V +L S +P D+L++ L D DSA +K E K
Sbjct: 180 VDLADLLPSAIIMVVSVTALTTKGSALPEDVLQKVLEACDRALDLDSARKKVLEFVESKM 239
Query: 253 SEVITNV 273
+ N+
Sbjct: 240 GSIAPNL 246
>UniRef50_Q1A0R2 Cluster: Gp17; n=2; unclassified Siphoviridae|Rep:
Gp17 - Mycobacterium phage Halo
Length = 390
Score = 33.5 bits (73), Expect = 6.9
Identities = 19/56 (33%), Positives = 27/56 (48%)
Frame = +2
Query: 473 GRPAYGDGKDKTSPRVSWKLIALWENNKVYFKILNTERNQYLVLGVGTNWNGXHMA 640
G PAY D P SW+ + WE+ Y IL E Q++ + TNW H++
Sbjct: 24 GNPAYAP-VDLGHP--SWQRMTRWEDMGQYGNILRGESPQWVWMHPNTNWKVWHLS 76
>UniRef50_Q7NRP8 Cluster: Putative uncharacterized protein; n=1;
Chromobacterium violaceum|Rep: Putative uncharacterized
protein - Chromobacterium violaceum
Length = 173
Score = 33.1 bits (72), Expect = 9.1
Identities = 19/76 (25%), Positives = 35/76 (46%)
Frame = +2
Query: 596 LVLGVGTNWNGXHMAFGVNSVDSFRAQWYLQPAKYDNDVLFYIYNREYSKGF*HCRGRLS 775
+VL W FG +D+ R QW+++ A+ ++ + +NR YS+ +GR
Sbjct: 4 MVLAALAKWPNVPAVFGWLRLDA-RGQWWIKDARLQHEGMVEFFNRNYSR---DGQGRCY 59
Query: 776 PSGSPHGLGIQRQSNP 823
P + +Q + P
Sbjct: 60 VQNGPQKVYVQLDAAP 75
>UniRef50_Q7RI40 Cluster: Putative uncharacterized protein PY03790;
n=9; Plasmodium (Vinckeia)|Rep: Putative uncharacterized
protein PY03790 - Plasmodium yoelii yoelii
Length = 884
Score = 33.1 bits (72), Expect = 9.1
Identities = 16/60 (26%), Positives = 30/60 (50%)
Frame = +1
Query: 127 SLYAADSDVPNDILEEQLYNSVVVADYDSAVEKSKHLYEEKKSEVITNVVNKLIRNNKMN 306
SLYA D N ++ Y Y+ ++K + +E++ E N++ K+I+N+ N
Sbjct: 140 SLYAIDPSFKNKKIKIIRYLKYTKKVYEQLLKKCSEINKEERKEFCKNIILKIIKNDIQN 199
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 779,922,144
Number of Sequences: 1657284
Number of extensions: 14919663
Number of successful extensions: 48564
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 46368
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 48538
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 74603367202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -