Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_L04
         (849 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4 prot...    27   0.19 
EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic acetyl...    25   1.00 
EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic acetyl...    25   1.00 
EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic acetyl...    23   2.3  
EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic acetyl...    23   2.3  
EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic acetyl...    23   2.3  
DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired pr...    23   2.3  
S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Triboliu...    23   3.1  
AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   4.0  
EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock prote...    22   5.3  
DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    22   7.0  
AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax pr...    22   7.0  
AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory recept...    21   9.3  
AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory recept...    21   9.3  

>EF125543-1|ABL73927.1|  475|Tribolium castaneum chitinase 4
           protein.
          Length = 475

 Score = 27.1 bits (57), Expect = 0.19
 Identities = 13/34 (38%), Positives = 18/34 (52%)
 Frame = +1

Query: 301 MNCMEYAYQLWLQGLQGHRPGLFPS*VQTYLRRK 402
           +N M Y  +    G+ GH  GL+PS V T   +K
Sbjct: 202 INVMAYDLRGSWDGVTGHHSGLYPSAVDTTTNQK 235


>EF127809-1|ABL67946.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           4 protein.
          Length = 311

 Score = 24.6 bits (51), Expect = 1.00
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = -3

Query: 529 LPADSRACLVLAVAVGRSAIVALNIIAQRQSETVALVHKLNRVF 398
           LP DS   L L V +  S  V LN++A++   T   V  +   F
Sbjct: 235 LPPDSGEKLTLGVTILLSLTVFLNLVAEKIPTTSDAVPLIGTYF 278


>EF127806-1|ABL67943.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           1 protein.
          Length = 311

 Score = 24.6 bits (51), Expect = 1.00
 Identities = 15/44 (34%), Positives = 21/44 (47%)
 Frame = -3

Query: 529 LPADSRACLVLAVAVGRSAIVALNIIAQRQSETVALVHKLNRVF 398
           LP DS   L L V +  S  V LN++A++   T   V  +   F
Sbjct: 235 LPPDSGEKLTLGVTILLSLTVFLNLVAEKIPTTSDAVPLIGTYF 278


>EF127810-1|ABL67947.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           5 protein.
          Length = 311

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -3

Query: 529 LPADSRACLVLAVAVGRSAIVALNIIAQ 446
           LP DS   L L V +  S  V LN++A+
Sbjct: 235 LPPDSGEKLTLGVTILLSLTVFLNLVAE 262


>EF127808-1|ABL67945.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           3 protein.
          Length = 311

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -3

Query: 529 LPADSRACLVLAVAVGRSAIVALNIIAQ 446
           LP DS   L L V +  S  V LN++A+
Sbjct: 235 LPPDSGEKLTLGVTILLSLTVFLNLVAE 262


>EF127807-1|ABL67944.1|  311|Tribolium castaneum nicotinic
           acetylcholine receptor subunitalpha 6 transcript variant
           2 protein.
          Length = 311

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 12/28 (42%), Positives = 16/28 (57%)
 Frame = -3

Query: 529 LPADSRACLVLAVAVGRSAIVALNIIAQ 446
           LP DS   L L V +  S  V LN++A+
Sbjct: 235 LPPDSGEKLTLGVTILLSLTVFLNLVAE 262


>DQ414248-1|ABD63010.2|  311|Tribolium castaneum sloppy-paired
           protein.
          Length = 311

 Score = 23.4 bits (48), Expect = 2.3
 Identities = 12/32 (37%), Positives = 19/32 (59%)
 Frame = +2

Query: 134 MLQIPTSLTTFWRSSFTIASSSPITTVRLKRA 229
           +L IPT   T  +SSF+I+S  P T +   ++
Sbjct: 8   ILVIPTMARTPLKSSFSISSILPETALEAPKS 39


>S73225-1|AAB30811.1|  327|Tribolium castaneum protein ( Tribolium
           castaneum homeodomainprotein mRNA, complete cds. ).
          Length = 327

 Score = 23.0 bits (47), Expect = 3.1
 Identities = 8/9 (88%), Positives = 8/9 (88%)
 Frame = +2

Query: 815 SNPESPEHY 841
           S PESPEHY
Sbjct: 102 STPESPEHY 110


>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
           candidate 46 protein.
          Length = 1451

 Score = 22.6 bits (46), Expect = 4.0
 Identities = 8/28 (28%), Positives = 19/28 (67%)
 Frame = +2

Query: 368 FPVEFRLIFAENAIKLMYKRDGLALTLS 451
           FP+++ L+F+E  + L++K   + + +S
Sbjct: 701 FPIDYSLVFSETKL-LLFKITSVMIAVS 727


>EF633444-1|ABR32189.1|  721|Tribolium castaneum heat shock protein
           90 protein.
          Length = 721

 Score = 22.2 bits (45), Expect = 5.3
 Identities = 11/38 (28%), Positives = 22/38 (57%)
 Frame = +2

Query: 407 IKLMYKRDGLALTLSNDVQGDDGRPAYGDGKDKTSPRV 520
           IKL+ +++     LS+D   ++ +   G+ KDK  P++
Sbjct: 211 IKLVVEKER-EKELSDDEAEEEKKEEEGEDKDKDKPKI 247


>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 12/31 (38%), Positives = 15/31 (48%)
 Frame = +2

Query: 431 GLALTLSNDVQGDDGRPAYGDGKDKTSPRVS 523
           G   TLSN  +     PA G GK+ T  + S
Sbjct: 335 GRTFTLSNTAKFGVHAPASGGGKEGTYTKES 365


>AY055847-1|AAL23667.2|  312|Tribolium castaneum cephalothorax
           protein.
          Length = 312

 Score = 21.8 bits (44), Expect = 7.0
 Identities = 14/39 (35%), Positives = 18/39 (46%)
 Frame = +3

Query: 321 LSTLAPGXPRTSSGIVSQLSSDLSSPKTRLSLCTSATVS 437
           LST +      SSG+ S LS   S P    +  TS  +S
Sbjct: 129 LSTPSNSNATKSSGLTSPLSVSTSPPGKPATSTTSQNLS 167


>AM292374-1|CAL23186.2|  659|Tribolium castaneum gustatory receptor
           candidate 53 protein.
          Length = 659

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 7/19 (36%), Positives = 14/19 (73%)
 Frame = +2

Query: 122 WHLCMLQIPTSLTTFWRSS 178
           +H+ M  +PT L +F++S+
Sbjct: 59  YHIFMHIVPTKLISFYKST 77


>AM292370-1|CAL23182.1|  418|Tribolium castaneum gustatory receptor
           candidate 49 protein.
          Length = 418

 Score = 21.4 bits (43), Expect = 9.3
 Identities = 10/26 (38%), Positives = 16/26 (61%)
 Frame = +2

Query: 527 KLIALWENNKVYFKILNTERNQYLVL 604
           KL+ L  + +  + IL+ + N YLVL
Sbjct: 7   KLLLLDSSTQPNYLILSNKNNTYLVL 32


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 176,974
Number of Sequences: 336
Number of extensions: 3462
Number of successful extensions: 20
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 20
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 20
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23451794
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)