Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_K20
         (830 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81095-2|CAB03157.1|   65|Caenorhabditis elegans Hypothetical pr...    63   2e-10
AF047660-4|AAM54169.1|   63|Caenorhabditis elegans Hypothetical ...    60   2e-09
Z83125-5|CAB05622.2|  362|Caenorhabditis elegans Hypothetical pr...    29   4.1  
Z77661-11|CAB01190.2| 1099|Caenorhabditis elegans Hypothetical p...    29   4.1  
AF016682-5|AAB66184.1|  409|Caenorhabditis elegans Hypothetical ...    29   4.1  
Z81130-7|CAE17967.1|  199|Caenorhabditis elegans Hypothetical pr...    29   5.4  
AC006794-5|AAK68502.1|  821|Caenorhabditis elegans Hypothetical ...    28   7.1  
Z81583-4|CAB04669.1|  323|Caenorhabditis elegans Hypothetical pr...    28   9.4  

>Z81095-2|CAB03157.1|   65|Caenorhabditis elegans Hypothetical
           protein F59F4.2 protein.
          Length = 65

 Score = 63.3 bits (147), Expect = 2e-10
 Identities = 27/43 (62%), Positives = 33/43 (76%)
 Frame = +1

Query: 139 MAPKQRMRIANEIASKNITMRGNVPKTTKEKEDQYPVAPWLLG 267
           MAPKQRM +AN+  SKN+  RGNV K+ K  ED+YP APWL+G
Sbjct: 1   MAPKQRMTLANKQFSKNVNNRGNVAKSLKPAEDKYPAAPWLIG 43



 Score = 36.7 bits (81), Expect = 0.020
 Identities = 14/25 (56%), Positives = 21/25 (84%)
 Frame = +2

Query: 254 PGSLALFIFVVCGSAVFQIIQSIRL 328
           P  + LF+FVVCGSAVF+II+ +++
Sbjct: 39  PWLIGLFVFVVCGSAVFEIIRYVKM 63


>AF047660-4|AAM54169.1|   63|Caenorhabditis elegans Hypothetical
           protein T09A12.5 protein.
          Length = 63

 Score = 60.1 bits (139), Expect = 2e-09
 Identities = 25/43 (58%), Positives = 31/43 (72%)
 Frame = +1

Query: 139 MAPKQRMRIANEIASKNITMRGNVPKTTKEKEDQYPVAPWLLG 267
           MAPKQRM +AN   SKN+T RGNVPK  K  E ++P + WL+G
Sbjct: 1   MAPKQRMAVANAQFSKNVTQRGNVPKGNKTNESKFPTSQWLIG 43



 Score = 38.7 bits (86), Expect = 0.005
 Identities = 19/40 (47%), Positives = 28/40 (70%), Gaps = 3/40 (7%)
 Frame = +2

Query: 218 LPRKKKTNILWHPGS---LALFIFVVCGSAVFQIIQSIRL 328
           +P+  KTN    P S   + LFIFVVCGSA+F++I+ I++
Sbjct: 24  VPKGNKTNESKFPTSQWLIGLFIFVVCGSAIFEVIRYIKV 63


>Z83125-5|CAB05622.2|  362|Caenorhabditis elegans Hypothetical
           protein T15D6.6 protein.
          Length = 362

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 11/29 (37%), Positives = 19/29 (65%)
 Frame = -2

Query: 127 IKYICQFNNKLKGLEEPQRAISLDT*IKV 41
           I+Y+C+ NN+ KG+ +  RA   D  +K+
Sbjct: 44  IRYLCEKNNQCKGMRKNCRACRFDYCVKI 72


>Z77661-11|CAB01190.2| 1099|Caenorhabditis elegans Hypothetical
           protein F40G12.3 protein.
          Length = 1099

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 12/24 (50%), Positives = 15/24 (62%), Gaps = 2/24 (8%)
 Frame = +1

Query: 295 CCVPD--NPINKTSLNHEDNWRTA 360
           CC P+  N +N  S+ H  NWRTA
Sbjct: 136 CCFPEVVNYLNTHSVGHVKNWRTA 159


>AF016682-5|AAB66184.1|  409|Caenorhabditis elegans Hypothetical
           protein T07D3.4 protein.
          Length = 409

 Score = 29.1 bits (62), Expect = 4.1
 Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 1/39 (2%)
 Frame = +1

Query: 241 YPVA-PWLLGSLHLRSVWLCCVPDNPINKTSLNHEDNWR 354
           YP+  PW    LH    W+ C   NP+ K    + ++W+
Sbjct: 318 YPIYDPWCAADLHGHIFWVSC---NPLEKILAEYGEDWK 353


>Z81130-7|CAE17967.1|  199|Caenorhabditis elegans Hypothetical
           protein T23G11.10 protein.
          Length = 199

 Score = 28.7 bits (61), Expect = 5.4
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +2

Query: 179 PVKTSQ*GGMYPKLPRKKKTNILWHPGSLALF 274
           PVKT + GG++PK    K  ++ W P  +  F
Sbjct: 144 PVKTLKMGGVFPK---NKANSVFWSPADIVAF 172


>AC006794-5|AAK68502.1|  821|Caenorhabditis elegans Hypothetical
           protein Y50D4A.1 protein.
          Length = 821

 Score = 28.3 bits (60), Expect = 7.1
 Identities = 11/26 (42%), Positives = 18/26 (69%)
 Frame = +2

Query: 11  TTHYRESLRFDFYLRVKRNCALWLFE 88
           TT + E LR +F L++K +C LW ++
Sbjct: 377 TTGFFEHLRREFPLQIKLHCLLWSYK 402


>Z81583-4|CAB04669.1|  323|Caenorhabditis elegans Hypothetical
           protein T02G6.4 protein.
          Length = 323

 Score = 27.9 bits (59), Expect = 9.4
 Identities = 11/26 (42%), Positives = 14/26 (53%)
 Frame = +1

Query: 280 RSVWLCCVPDNPINKTSLNHEDNWRT 357
           RS+W CC+P    N  S   +  WRT
Sbjct: 275 RSMWSCCIPTTYYNNYSNALKIAWRT 300


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,067,522
Number of Sequences: 27780
Number of extensions: 346575
Number of successful extensions: 774
Number of sequences better than 10.0: 8
Number of HSP's better than 10.0 without gapping: 753
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 774
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 2061488408
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)