Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_K19
(872 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 47 4e-06
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 42 9e-05
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 34 0.030
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 33 0.040
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.040
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 27 0.053
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 0.12
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 30 0.37
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 29 0.65
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 27 0.69
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 29 1.1
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 4.6
SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase Y|Schizosacch... 26 6.1
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 26 6.1
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 26 8.1
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 26 8.1
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 26 8.1
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 46.8 bits (106), Expect = 4e-06
Identities = 20/48 (41%), Positives = 20/48 (41%)
Frame = +1
Query: 583 PXKXGGXXPPPPPPPXXXXXXXPPPPPPPPXXXXKXXXPXXPPPXXXP 726
P G PPPPPPP PPPPPPPP P P P
Sbjct: 754 PAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEP 801
Score = 40.3 bits (90), Expect = 3e-04
Identities = 16/35 (45%), Positives = 16/35 (45%)
Frame = +1
Query: 610 PPPPPPXXXXXXXPPPPPPPPXXXXKXXXPXXPPP 714
P P PP PPPPPPPP P PPP
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPP 782
Score = 39.1 bits (87), Expect = 8e-04
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = +1
Query: 607 PPPPPPPXXXXXXXPPPPPPPPXXXXKXXXPXXPPP 714
P P PPP PPPPPPP P PPP
Sbjct: 748 PIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 36.7 bits (81), Expect = 0.004
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +1
Query: 607 PPPPPPPXXXXXXXPPPPPPPPXXXXKXXXPXXPPP 714
PPPPPP P P P PP P PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
Score = 35.9 bits (79), Expect = 0.008
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +1
Query: 607 PPPPPPPXXXXXXXPPPPPPPPXXXXKXXXPXXPPP 714
P P P P PPPPPPP P PPP
Sbjct: 746 PAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 29.5 bits (63), Expect = 0.65
Identities = 16/59 (27%), Positives = 18/59 (30%), Gaps = 4/59 (6%)
Frame = +2
Query: 359 PPP----PXPXGXXXXFSPPXXXXXXXGXXPPQXXGGGGGXPXXPPPXPXXGGXXKXFF 523
PPP P P PP PP G G P PPP P ++
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAGGSRYY 793
Score = 27.1 bits (57), Expect = 3.5
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -3
Query: 546 PPPGXXKKKKXFXSPPXXGXGGGXXGXPPPPPXXWGG 436
PPP PP G G PPPPP G
Sbjct: 752 PPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAG 788
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 42.3 bits (95), Expect = 9e-05
Identities = 15/24 (62%), Positives = 15/24 (62%)
Frame = +1
Query: 598 GXXPPPPPPPXXXXXXXPPPPPPP 669
G PPPPPPP PPPPPPP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 40.7 bits (91), Expect = 3e-04
Identities = 15/27 (55%), Positives = 15/27 (55%)
Frame = +1
Query: 607 PPPPPPPXXXXXXXPPPPPPPPXXXXK 687
PPPPPPP PPPPPPP K
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPPGYVKK 35
Score = 35.9 bits (79), Expect = 0.008
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +1
Query: 595 GGXXPPPPPPPXXXXXXXPPPPPP 666
G PPPPPP PPPPPP
Sbjct: 7 GNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 33.9 bits (74), Expect = 0.030
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +1
Query: 649 PPPPPPPPXXXXKXXXPXXPPP 714
PPPPPPPP P PPP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPP 30
Score = 31.9 bits (69), Expect = 0.12
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +2
Query: 611 PPPPPPXXXXXXXPPPPPXPPXXXXKXXXXXXP 709
PPPPPP PPP PP K P
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPPPGYVKKRKNKTP 41
Score = 27.9 bits (59), Expect = 2.0
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +1
Query: 649 PPPPPPPPXXXXKXXXPXXPPPXXXP 726
PP PPPP P PPP P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.9 bits (59), Expect = 2.0
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = +1
Query: 319 PPP*RXGGEKXXXPPPPXPP 378
PPP G E PPPP PP
Sbjct: 11 PPPPPPGFEPPSQPPPPPPP 30
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 33.9 bits (74), Expect = 0.030
Identities = 28/90 (31%), Positives = 28/90 (31%)
Frame = -1
Query: 851 GKXGGGVFVGXXFXGGXGXXXXTPXXXXXXXXXXXXXXXGXXGXXXGGGXXGXXFXXXXX 672
G GGG F G F GG G P GGG G
Sbjct: 184 GHNGGG-FGG--FGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGF 240
Query: 671 GGGGGGGGXXXXXXXGGGGGGGXXPPXXXG 582
GGG GG G GG GG G P G
Sbjct: 241 GGGPGGFGGGLGGFGGGPGGFGGGPGGHGG 270
Score = 29.5 bits (63), Expect = 0.65
Identities = 21/58 (36%), Positives = 21/58 (36%)
Frame = -1
Query: 491 GGXXXGXGXPPPPPXXGGGXXPFFFFFXXGXKKXXXTXGGKGGGGXXXFSPPXL*GGG 318
GG G G PPP P GG F G GG GGG P GGG
Sbjct: 191 GGFGGGSGGPPPGPGGFGGFGGF-----GGEGHHHGGHGGFGGGPGGFEGGPGGFGGG 243
Score = 28.7 bits (61), Expect = 1.1
Identities = 18/49 (36%), Positives = 19/49 (38%)
Frame = -3
Query: 492 GXGGGXXGXPPPPPXXWGGXXPXXXXXXXGGEKXXXNPXGXGGGGXXXF 346
G GG G PPP P +GG GGE G GGG F
Sbjct: 191 GGFGGGSGGPPPGPGGFGG------FGGFGGEGHHHGGHGGFGGGPGGF 233
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 33.5 bits (73), Expect = 0.040
Identities = 30/133 (22%), Positives = 33/133 (24%), Gaps = 12/133 (9%)
Frame = +1
Query: 364 PPXPPXVXXXFFXPXKKKKKXGXXPPPXXGGGGGX-PXPXXXPPXXGGGXKXXXXXXXXX 540
PP PP + P + PPP G P PP
Sbjct: 230 PPIPPSIPSSR-PPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTS 288
Query: 541 XXXXXXQKKKTFXXPXKXGGXXPPPPPPPXXXXXXXP-----------PPPPPPPXXXXK 687
+ PPPPPPP P PPPPPPP
Sbjct: 289 KPPLPPPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAA 348
Query: 688 XXXPXXPPPXXXP 726
P P P
Sbjct: 349 GSIPLPPQGRSAP 361
Score = 31.5 bits (68), Expect = 0.16
Identities = 29/132 (21%), Positives = 32/132 (24%), Gaps = 2/132 (1%)
Frame = +1
Query: 322 PP*RXGGEKXXXPPPPXPPXVXXXFFXPXKKKKKXGXXPPPXXGGGGGXPXPXXXPPXXG 501
PP G PPPP PP P + + PPP P PP
Sbjct: 325 PPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQP---PPLSS 381
Query: 502 GGXKXXXXXXXXXXXXXXXQKKKTFXXPXKXGGXXPPPPPPPXXXXXXXP--PPPPPPPX 675
+ PP P PP P PP PP
Sbjct: 382 SRAVSNPPAPPPAIPGRSAPALPPLGNASRTS--TPPVPTPPSLPPSAPPSLPPSAPPSL 439
Query: 676 XXXKXXXPXXPP 711
P PP
Sbjct: 440 PMGAPAAPPLPP 451
Score = 31.1 bits (67), Expect = 0.21
Identities = 17/42 (40%), Positives = 17/42 (40%), Gaps = 6/42 (14%)
Frame = +1
Query: 607 PPPPPPP-XXXXXXXPPPP-----PPPPXXXXKXXXPXXPPP 714
PPPPPPP P PP PPPP PPP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPP 378
Score = 31.1 bits (67), Expect = 0.21
Identities = 17/56 (30%), Positives = 18/56 (32%)
Frame = +2
Query: 554 PXKKKKXXSXPXKXGGXXPPPPPPPXXXXXXXPPPPPXPPXXXXKXXXXXXPXPPP 721
P + S P G PPPPPP PPP P PPP
Sbjct: 342 PPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPP----LSSSRAVSNPPAPPP 393
Score = 28.7 bits (61), Expect = 1.1
Identities = 13/40 (32%), Positives = 13/40 (32%)
Frame = +2
Query: 608 PPPPPPPXXXXXXXPPPPPXPPXXXXKXXXXXXPXPPPXP 727
PP P PP P PP P P PP P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAP 454
Score = 27.5 bits (58), Expect = 2.6
Identities = 29/131 (22%), Positives = 30/131 (22%), Gaps = 10/131 (7%)
Frame = +2
Query: 359 PPPPXPXGXXXXFSPPXXXXXXXGXXPPQXX----GGGGGXPXXP------PPXPXXGGX 508
PPPP P PP PP G P P PP P
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Query: 509 XKXFFFFXXPGGGXXPXKKKKXXSXPXKXGGXXPPPPPPPXXXXXXXPPPPPXPPXXXXK 688
P + P G P PP PP P PP
Sbjct: 371 STG----RQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPS 426
Query: 689 XXXXXXPXPPP 721
P PP
Sbjct: 427 APPSLPPSAPP 437
Score = 26.2 bits (55), Expect = 6.1
Identities = 11/38 (28%), Positives = 14/38 (36%)
Frame = -2
Query: 547 PPPRXXKKKKXFXXPPXRGXGXXXVXXPPPPPXXLGGG 434
PPP ++ P G + PPPPP G
Sbjct: 312 PPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAG 349
Score = 25.8 bits (54), Expect = 8.1
Identities = 10/32 (31%), Positives = 12/32 (37%)
Frame = -3
Query: 546 PPPGXXKKKKXFXSPPXXGXGGGXXGXPPPPP 451
PPP ++ PP PPPPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPP 342
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 33.5 bits (73), Expect = 0.040
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = +1
Query: 610 PPPPPPXXXXXXXPPPPPPPPXXXXKXXXPXXPPPXXXP 726
PP P P PPP PP P PPP P
Sbjct: 1179 PPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAP 1217
Score = 31.9 bits (69), Expect = 0.12
Identities = 18/59 (30%), Positives = 19/59 (32%)
Frame = +2
Query: 545 GXXPXKKKKXXSXPXKXGGXXPPPPPPPXXXXXXXPPPPPXPPXXXXKXXXXXXPXPPP 721
G P K + P PP P P PPP PP K P PPP
Sbjct: 1157 GAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPP--VPKPSVGVPPVPPP 1213
Score = 29.1 bits (62), Expect = 0.86
Identities = 41/179 (22%), Positives = 46/179 (25%), Gaps = 2/179 (1%)
Frame = +1
Query: 184 PLNRVPQKIWPKGFXPPVXFXPXGXPP-KNFFLXXXXXPX*NFXXTPPP*RXGGEKXXXP 360
P + +P P G PPV P G PP + P + P P G P
Sbjct: 1069 PSSEIPSIPAPSG-APPVP-APSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKP 1126
Query: 361 PPPXPPXVXXXFFXPXKKKKKXGXXPPPXXGGGGGXPXPXXX-PPXXGGGXKXXXXXXXX 537
PP V P K P P G P P PP
Sbjct: 1127 SVAAPP-VPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPA 1185
Query: 538 XXXXXXXQKKKTFXXPXKXGGXXPPPPPPPXXXXXXXPPPPPPPPXXXXKXXXPXXPPP 714
+ P G PP PPP P PP P P P
Sbjct: 1186 AGVPPVPPPSEAPPVPKPSVGV--PPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 26.6 bits (56), Expect = 4.6
Identities = 30/141 (21%), Positives = 32/141 (22%), Gaps = 5/141 (3%)
Frame = +1
Query: 319 PPP*RXGGEKXXXPPPPXPPXVXXXFFXPXKKKKKXGXX--PPPXXGGGG---GXPXPXX 483
PP + P P P V P K G PPP P P
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSG 1081
Query: 484 XPPXXGGGXKXXXXXXXXXXXXXXXQKKKTFXXPXKXGGXXPPPPPPPXXXXXXXPPPPP 663
PP K + P PP P P P P
Sbjct: 1082 APPVPAPSG---IPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSG 1138
Query: 664 PPPXXXXKXXXPXXPPPXXXP 726
PP P P P P
Sbjct: 1139 APPVPKPSVAAPPVPAPSGAP 1159
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 27.1 bits (57), Expect(2) = 0.053
Identities = 9/13 (69%), Positives = 9/13 (69%)
Frame = +1
Query: 649 PPPPPPPPXXXXK 687
PPPPPPPP K
Sbjct: 1095 PPPPPPPPAEVEK 1107
Score = 24.6 bits (51), Expect(2) = 0.053
Identities = 8/13 (61%), Positives = 8/13 (61%)
Frame = +1
Query: 589 KXGGXXPPPPPPP 627
K PPPPPPP
Sbjct: 1090 KPSAVPPPPPPPP 1102
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.5 bits (58), Expect = 2.6
Identities = 12/36 (33%), Positives = 12/36 (33%)
Frame = +1
Query: 607 PPPPPPPXXXXXXXPPPPPPPPXXXXKXXXPXXPPP 714
PP P PPPPPPP P P
Sbjct: 224 PPTYTPKQADPLPAPPPPPPPTLPPQSTNTSQLPMP 259
Score = 26.6 bits (56), Expect = 4.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 649 PPPPPPPP 672
PPPPPPPP
Sbjct: 189 PPPPPPPP 196
Score = 26.6 bits (56), Expect(2) = 0.12
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 649 PPPPPPPP 672
PPPPPPPP
Sbjct: 190 PPPPPPPP 197
Score = 23.8 bits (49), Expect(2) = 0.12
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +1
Query: 607 PPPPPPP 627
PPPPPPP
Sbjct: 189 PPPPPPP 195
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 30.3 bits (65), Expect = 0.37
Identities = 15/43 (34%), Positives = 15/43 (34%), Gaps = 3/43 (6%)
Frame = +1
Query: 607 PPPPPPPXXXXXXXPPPP---PPPPXXXXKXXXPXXPPPXXXP 726
P PP PPPP PPPP P PP P
Sbjct: 1694 PQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 28.7 bits (61), Expect = 1.1
Identities = 15/48 (31%), Positives = 16/48 (33%), Gaps = 4/48 (8%)
Frame = +1
Query: 583 PXKXGGXXPPPPPPPXXXXXXXPP----PPPPPPXXXXKXXXPXXPPP 714
P + PPPPP PP PP PP P P P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 27.9 bits (59), Expect = 2.0
Identities = 10/21 (47%), Positives = 10/21 (47%)
Frame = +2
Query: 608 PPPPPPPXXXXXXXPPPPPXP 670
PPP PP PPPP P
Sbjct: 1716 PPPSAPPMPAGPPSAPPPPLP 1736
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 29.5 bits (63), Expect = 0.65
Identities = 15/40 (37%), Positives = 15/40 (37%)
Frame = -3
Query: 726 GXGGGXGXXXXXXFXXXXGGXGGGGGXXXXXXXGGGGGGG 607
G GGG G GG GG GG GG GG
Sbjct: 27 GFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGG 66
Score = 26.2 bits (55), Expect = 6.1
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -3
Query: 726 GXGGGXGXXXXXXFXXXXGGXGGGGGXXXXXXXGGGGGG 610
G GG G F GG GGG G GG GG
Sbjct: 10 GRGGSRGGRGG--FNGGRGGFGGGRGGARGGGRGGARGG 46
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 26.6 bits (56), Expect(2) = 0.69
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 649 PPPPPPPP 672
PPPPPPPP
Sbjct: 945 PPPPPPPP 952
Score = 26.6 bits (56), Expect(2) = 0.90
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 649 PPPPPPPP 672
PPPPPPPP
Sbjct: 946 PPPPPPPP 953
Score = 21.0 bits (42), Expect(2) = 0.69
Identities = 6/6 (100%), Positives = 6/6 (100%)
Frame = +1
Query: 607 PPPPPP 624
PPPPPP
Sbjct: 907 PPPPPP 912
Score = 20.6 bits (41), Expect(2) = 0.90
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = +1
Query: 607 PPPPPPP 627
P PPPPP
Sbjct: 905 PTPPPPP 911
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 28.7 bits (61), Expect = 1.1
Identities = 13/37 (35%), Positives = 14/37 (37%)
Frame = +2
Query: 560 KKKKXXSXPXKXGGXXPPPPPPPXXXXXXXPPPPPXP 670
K + S GG PPPPPPP P P
Sbjct: 291 KTQAPSSGDSANGGLPPPPPPPPPSNDFWKDSNEPAP 327
Score = 26.6 bits (56), Expect = 4.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 649 PPPPPPPP 672
PPPPPPPP
Sbjct: 306 PPPPPPPP 313
Score = 26.6 bits (56), Expect = 4.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 649 PPPPPPPP 672
PPPPPPPP
Sbjct: 307 PPPPPPPP 314
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.6 bits (56), Expect = 4.6
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 649 PPPPPPPP 672
PPPPPPPP
Sbjct: 370 PPPPPPPP 377
>SPAC19G12.10c |cpy1|pcy1|vacuolar carboxypeptidase
Y|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1002
Score = 26.2 bits (55), Expect = 6.1
Identities = 24/105 (22%), Positives = 26/105 (24%)
Frame = +2
Query: 359 PPPPXPXGXXXXFSPPXXXXXXXGXXPPQXXGGGGGXPXXPPPXPXXGGXXKXFFFFXXP 538
PPPP PP PP G PPP G P
Sbjct: 208 PPPPMHHKPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGE-----HMPPP 262
Query: 539 GGGXXPXKKKKXXSXPXKXGGXXPPPPPPPXXXXXXXPPPPPXPP 673
P + + G PPPP PPP P
Sbjct: 263 PMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEPGEHMPPPPMHHEP 307
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 26.2 bits (55), Expect = 6.1
Identities = 14/39 (35%), Positives = 14/39 (35%)
Frame = -1
Query: 713 GGGXXGXXFXXXXXGGGGGGGGXXXXXXXGGGGGGGXXP 597
GGG G GG GG GG G GG P
Sbjct: 446 GGGSRGGRGGFGGRGGFGGRGGFGGGRGRGRGGARSGNP 484
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 25.8 bits (54), Expect = 8.1
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +1
Query: 610 PPPPPPXXXXXXXPPPPP 663
PP P P PPPPP
Sbjct: 731 PPTPAPTPAVKHHPPPPP 748
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 25.8 bits (54), Expect = 8.1
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +1
Query: 607 PPPPPPPXXXXXXXPPPP 660
PPPPPP P PP
Sbjct: 5 PPPPPPAPAPAAAAPAPP 22
Score = 25.8 bits (54), Expect = 8.1
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +1
Query: 610 PPPPPPXXXXXXXPPPPP 663
PPPPPP P PP
Sbjct: 5 PPPPPPAPAPAAAAPAPP 22
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 25.8 bits (54), Expect = 8.1
Identities = 10/24 (41%), Positives = 10/24 (41%)
Frame = +1
Query: 655 PPPPPPXXXXKXXXPXXPPPXXXP 726
PPPPPP K P P P
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALP 1905
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,776,890
Number of Sequences: 5004
Number of extensions: 58057
Number of successful extensions: 909
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 69
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 314
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 436477420
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -