Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_K18
         (879 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor...    24   1.6  
AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly pro...    22   6.5  
AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.          22   8.6  
AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C prot...    22   8.6  

>U15956-1|AAA67444.1|  129|Apis mellifera hymenoptaecin precursor
           protein.
          Length = 129

 Score = 24.2 bits (50), Expect = 1.6
 Identities = 10/26 (38%), Positives = 14/26 (53%)
 Frame = +3

Query: 342 DRGKLTGQAYGTRVLGPGGDSTSYGG 419
           D+  +TG AYG   + PG  S  + G
Sbjct: 66  DKNGMTGDAYGGLNIRPGQPSRQHAG 91


>AY313893-1|AAQ82184.1|  437|Apis mellifera major royal jelly
           protein MRJP6 protein.
          Length = 437

 Score = 22.2 bits (45), Expect = 6.5
 Identities = 11/33 (33%), Positives = 19/33 (57%)
 Frame = -2

Query: 167 CVTRRHRNLSVHAYKECSGITTXLEYILNCDRF 69
           C+ + + + S   YK+CSGI +   Y +  D+F
Sbjct: 106 CLLQPYPDWSWANYKDCSGIVS--AYKIAIDKF 136


>AY569713-1|AAS86666.1|  401|Apis mellifera feminizer protein.
          Length = 401

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 11/36 (30%), Positives = 17/36 (47%)
 Frame = +2

Query: 197 KVSPTPSRYSRLCHLGQGNGGREGLRDFGRERPRTF 304
           + S   SRY  L H  + +   +G R   R+R R +
Sbjct: 226 RTSSCHSRYEDLRHEDRNSYRNDGERSCSRDRSREY 261


>AB013288-1|BAA87894.1|  149|Apis mellifera protein kinase C
           protein.
          Length = 149

 Score = 21.8 bits (44), Expect = 8.6
 Identities = 12/31 (38%), Positives = 17/31 (54%)
 Frame = -2

Query: 344 IIIEELPVITTFTKKSLVALSQSPEDLPSPH 252
           III++  V  T  +K ++ALS  P  L   H
Sbjct: 21  IIIQDDDVECTMVEKRVLALSTKPPFLVQLH 51


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 195,574
Number of Sequences: 438
Number of extensions: 3941
Number of successful extensions: 9
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 28523595
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)