Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_K15
         (892 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0945 - 21738643-21738760,21740056-21740287,21740582-217406...    69   4e-12
12_02_0695 + 22220054-22220056,22221226-22221276,22221415-222215...    65   6e-11
07_03_0445 - 18281715-18281832,18282274-18282505,18283486-182835...    65   6e-11
05_07_0347 - 29440541-29440664,29440908-29441020,29441522-294416...    62   8e-10

>10_08_0945 -
           21738643-21738760,21740056-21740287,21740582-21740630,
           21740720-21740776
          Length = 151

 Score = 69.3 bits (162), Expect = 4e-12
 Identities = 42/113 (37%), Positives = 55/113 (48%)
 Frame = +2

Query: 128 ERTFIMVKPDGVQRGLVGTIIERFEKKGFN*SV*NSYGHQKNFSSNTTAIWHPGLSSLGL 307
           E+TFIM+KPDGVQRGL+G +I RFEKKGF          +K+F+    A         GL
Sbjct: 4   EQTFIMIKPDGVQRGLIGEVIGRFEKKGFYLKAMKLINVEKSFAEKHYADLSSKPFFGGL 63

Query: 308 VKYMSSXXXXXXXXXXXXCCEDWPSXAWAQLNPXDSXXGTIRXDLCIQVGRNI 466
           V+Y+ S                      A  NP  +  GTIR D  + +GRN+
Sbjct: 64  VEYIVSGPVVAMVWEGKQVVSTGRKLVGA-TNPLAAEPGTIRGDFAVDIGRNV 115


>12_02_0695 +
           22220054-22220056,22221226-22221276,22221415-22221501,
           22222064-22222144,22222241-22222353,22222482-22222531,
           22222790-22222857
          Length = 150

 Score = 65.3 bits (152), Expect = 6e-11
 Identities = 41/113 (36%), Positives = 55/113 (48%)
 Frame = +2

Query: 128 ERTFIMVKPDGVQRGLVGTIIERFEKKGFN*SV*NSYGHQKNFSSNTTAIWHPGLSSLGL 307
           E+++IM+KPDGVQRGLVG II RFEKKGF       +   K+ +              GL
Sbjct: 3   EQSYIMIKPDGVQRGLVGEIISRFEKKGFVLKGLKLFQCPKDLAQEHYKDLKEKPFFPGL 62

Query: 308 VKYMSSXXXXXXXXXXXXCCEDWPSXAWAQLNPXDSXXGTIRXDLCIQVGRNI 466
           ++Y++S                      A  NP  +  GTIR DL +Q GRN+
Sbjct: 63  IEYITSGPVVCMAWEGNGVVASARKLIGA-TNPLQAEPGTIRGDLAVQTGRNV 114



 Score = 45.2 bits (102), Expect = 7e-05
 Identities = 28/74 (37%), Positives = 39/74 (52%), Gaps = 4/74 (5%)
 Frame = +1

Query: 196 FRKERLQLVGLKFVWPSEELLQQHYSDLASRPFFPGSSKVHEFRTCGPL----WYGRALM 363
           F K+   L GLK     ++L Q+HY DL  +PFFPG   + E+ T GP+    W G  ++
Sbjct: 26  FEKKGFVLKGLKLFQCPKDLAQEHYKDLKEKPFFPG---LIEYITSGPVVCMAWEGNGVV 82

Query: 364 L*RLAVXCLGATKP 405
               A   +GAT P
Sbjct: 83  --ASARKLIGATNP 94


>07_03_0445 -
           18281715-18281832,18282274-18282505,18283486-18283534,
           18283733-18283783
          Length = 149

 Score = 65.3 bits (152), Expect = 6e-11
 Identities = 41/113 (36%), Positives = 56/113 (49%)
 Frame = +2

Query: 128 ERTFIMVKPDGVQRGLVGTIIERFEKKGFN*SV*NSYGHQKNFSSNTTAIWHPGLSSLGL 307
           E++FIM+KPDGVQRGL+G II RFEKKGF          +++F+    A         GL
Sbjct: 2   EQSFIMIKPDGVQRGLIGDIISRFEKKGFYLRGMKFMNVERSFAQQHYADLSDKPFFPGL 61

Query: 308 VKYMSSXXXXXXXXXXXXCCEDWPSXAWAQLNPXDSXXGTIRXDLCIQVGRNI 466
           V+Y+ S                      A   P ++  GTIR D  ++VGRN+
Sbjct: 62  VEYIISGPVVAMVWEGKDVVATGRRIIGA-TRPWEAAPGTIRADYAVEVGRNV 113


>05_07_0347 -
           29440541-29440664,29440908-29441020,29441522-29441689,
           29442341-29442391,29442518-29442555,29442885-29442978
          Length = 195

 Score = 61.7 bits (143), Expect = 8e-10
 Identities = 41/117 (35%), Positives = 53/117 (45%)
 Frame = +2

Query: 116 AEQRERTFIMVKPDGVQRGLVGTIIERFEKKGFN*SV*NSYGHQKNFSSNTTAIWHPGLS 295
           A + ERTFI +KPDGVQRGL+  I+ RFE+KGF           K F+            
Sbjct: 42  AAEMERTFIAIKPDGVQRGLISEILSRFERKGFKLVAIKLVVPSKEFAQKHYHDLKDRPF 101

Query: 296 SLGLVKYMSSXXXXXXXXXXXXCCEDWPSXAWAQLNPXDSXXGTIRXDLCIQVGRNI 466
             GL  ++SS              + +        +P  S  GTIR DL + VGRNI
Sbjct: 102 FNGLCDFLSSGPVLAMVWEGEGVIK-YGRKLIGATDPQKSEPGTIRGDLAVVVGRNI 157



 Score = 46.8 bits (106), Expect = 2e-05
 Identities = 27/74 (36%), Positives = 41/74 (55%), Gaps = 4/74 (5%)
 Frame = +1

Query: 196 FRKERLQLVGLKFVWPSEELLQQHYSDLASRPFFPGSSKVHEFRTCGP----LWYGRALM 363
           F ++  +LV +K V PS+E  Q+HY DL  RPFF G   + +F + GP    +W G  ++
Sbjct: 69  FERKGFKLVAIKLVVPSKEFAQKHYHDLKDRPFFNG---LCDFLSSGPVLAMVWEGEGVI 125

Query: 364 L*RLAVXCLGATKP 405
             +     +GAT P
Sbjct: 126 --KYGRKLIGATDP 137


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,808,912
Number of Sequences: 37544
Number of extensions: 359507
Number of successful extensions: 699
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 645
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 688
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)