Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_K15
         (892 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical p...    65   6e-11
AF036694-4|AAB88342.1|  234|Caenorhabditis elegans Hypothetical ...    33   0.36 

>Z79754-13|CAB02101.1|  153|Caenorhabditis elegans Hypothetical
           protein F25H2.5 protein.
          Length = 153

 Score = 65.3 bits (152), Expect = 6e-11
 Identities = 46/117 (39%), Positives = 55/117 (47%), Gaps = 4/117 (3%)
 Frame = +2

Query: 128 ERTFIMVKPDGVQRGLVGTIIERFEKKGFN*SV*NSYGHQKNFSSNTTAIWHPGLSSL-- 301
           ERTFI +KPDGV RGLVG II RFE++G+          Q   S     + +  L     
Sbjct: 5   ERTFIAIKPDGVHRGLVGKIIARFEERGYKLVALK----QMTASKAHLEVHYQDLKDKPF 60

Query: 302 --GLVKYMSSXXXXXXXXXXXXCCEDWPSXAWAQLNPXDSXXGTIRXDLCIQVGRNI 466
              L++YMSS              +   S   A  NP  S  GTIR D CIQ GRNI
Sbjct: 61  FPSLIEYMSSGPVVAMVWQGLDVVKQGRSMLGA-TNPLASAPGTIRGDFCIQTGRNI 116



 Score = 37.5 bits (83), Expect = 0.013
 Identities = 26/74 (35%), Positives = 38/74 (51%), Gaps = 4/74 (5%)
 Frame = +1

Query: 196 FRKERLQLVGLKFVWPSEELLQQHYSDLASRPFFPGSSKVHEFRTCGP----LWYGRALM 363
           F +   +LV LK +  S+  L+ HY DL  +PFFP    + E+ + GP    +W G  L 
Sbjct: 28  FEERGYKLVALKQMTASKAHLEVHYQDLKDKPFFP---SLIEYMSSGPVVAMVWQG--LD 82

Query: 364 L*RLAVXCLGATKP 405
           + +     LGAT P
Sbjct: 83  VVKQGRSMLGATNP 96


>AF036694-4|AAB88342.1|  234|Caenorhabditis elegans Hypothetical
           protein CD4.4 protein.
          Length = 234

 Score = 32.7 bits (71), Expect = 0.36
 Identities = 15/50 (30%), Positives = 18/50 (36%)
 Frame = +1

Query: 670 HXQPPXXPPXXXXXPXXPPXXXSXGXGXSPFXXXFFGIPHXQTPXXGGHP 819
           + QP   PP     P  P      G G   F   + G P+   P  G HP
Sbjct: 183 YAQPTVPPPMPHAQPGYPTGNHMPGIGNIQFGSGYSGYPNISQPSAGRHP 232


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,633,280
Number of Sequences: 27780
Number of extensions: 297011
Number of successful extensions: 590
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 519
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 585
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)