Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_K14
(1065 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.065
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.065
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.065
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 35 0.11
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.46
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.46
U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical p... 31 1.1
U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical p... 31 1.1
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 31 1.1
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 31 1.4
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 31 1.8
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.8
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 31 1.8
U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical pr... 31 1.8
AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical... 31 1.8
AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like pro... 31 1.8
Z95559-4|CAB09004.1| 110|Caenorhabditis elegans Hypothetical pr... 30 2.4
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 30 2.4
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 30 2.4
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 30 2.4
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 30 3.2
Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical p... 29 4.3
Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical p... 29 4.3
AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical... 29 4.3
AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical... 29 4.3
AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical... 29 4.3
AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin ... 29 4.3
AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin ... 29 4.3
AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA topoisome... 29 4.3
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 29 5.6
AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical... 29 7.4
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 7.4
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 7.4
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 7.4
U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (gr... 25 8.7
Z68106-3|CAA92127.1| 74|Caenorhabditis elegans Hypothetical pr... 28 9.8
Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical pr... 28 9.8
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 35.5 bits (78), Expect = 0.065
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = +3
Query: 360 PLPXXPPXRGGXGXXPPXXGGRXXXPPPPXXPXPPP 467
P+ PP G PP GG PPPP PPP
Sbjct: 737 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 31.9 bits (69), Expect = 0.80
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 6/37 (16%)
Frame = +3
Query: 375 PPXRGGXGXXPPXXGGRXXXPPPP------XXPXPPP 467
PP GG PP GG PPPP P PPP
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 29.5 bits (63), Expect = 4.3
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +3
Query: 360 PLPXXPPXRGGXGXXPPXXGGRXXXPPPPXXPXPPP 467
P P PP GG PP G PP P PPP
Sbjct: 715 PPPGLPPITGGPPPPPPPGG----LPPITGGPPPPP 746
Score = 29.1 bits (62), Expect = 5.6
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +3
Query: 360 PLPXXPPXRGGXGXXPPXXGGRXXXPPPPXXPXPP 464
P+ PP G PP GG PPPP PP
Sbjct: 721 PITGGPPPPPPPGGLPPITGG--PPPPPPPGGLPP 753
Score = 28.7 bits (61), Expect = 7.4
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = +3
Query: 366 PXXPPXRGG--XGXXPPXXGGRXXXPPPPXXP 455
P PP GG PP GG PPPP P
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 35.5 bits (78), Expect = 0.065
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = +3
Query: 360 PLPXXPPXRGGXGXXPPXXGGRXXXPPPPXXPXPPP 467
P+ PP G PP GG PPPP PPP
Sbjct: 737 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 772
Score = 31.9 bits (69), Expect = 0.80
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 6/37 (16%)
Frame = +3
Query: 375 PPXRGGXGXXPPXXGGRXXXPPPP------XXPXPPP 467
PP GG PP GG PPPP P PPP
Sbjct: 752 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 788
Score = 29.5 bits (63), Expect = 4.3
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +3
Query: 360 PLPXXPPXRGGXGXXPPXXGGRXXXPPPPXXPXPPP 467
P P PP GG PP G PP P PPP
Sbjct: 715 PPPGLPPITGGPPPPPPPGG----LPPITGGPPPPP 746
Score = 29.1 bits (62), Expect = 5.6
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +3
Query: 360 PLPXXPPXRGGXGXXPPXXGGRXXXPPPPXXPXPP 464
P+ PP G PP GG PPPP PP
Sbjct: 721 PITGGPPPPPPPGGLPPITGG--PPPPPPPGGLPP 753
Score = 28.7 bits (61), Expect = 7.4
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = +3
Query: 366 PXXPPXRGG--XGXXPPXXGGRXXXPPPPXXP 455
P PP GG PP GG PPPP P
Sbjct: 759 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 790
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 35.5 bits (78), Expect = 0.065
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = +3
Query: 360 PLPXXPPXRGGXGXXPPXXGGRXXXPPPPXXPXPPP 467
P+ PP G PP GG PPPP PPP
Sbjct: 320 PITGGPPPPPPPGGLPPISGGPPPPPPPPGGCPPPP 355
Score = 31.9 bits (69), Expect = 0.80
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 6/37 (16%)
Frame = +3
Query: 375 PPXRGGXGXXPPXXGGRXXXPPPP------XXPXPPP 467
PP GG PP GG PPPP P PPP
Sbjct: 335 PPISGGPPPPPPPPGGCPPPPPPPPPGGFKGGPPPPP 371
Score = 29.5 bits (63), Expect = 4.3
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = +3
Query: 360 PLPXXPPXRGGXGXXPPXXGGRXXXPPPPXXPXPPP 467
P P PP GG PP G PP P PPP
Sbjct: 298 PPPGLPPITGGPPPPPPPGG----LPPITGGPPPPP 329
Score = 29.1 bits (62), Expect = 5.6
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +3
Query: 360 PLPXXPPXRGGXGXXPPXXGGRXXXPPPPXXPXPP 464
P+ PP G PP GG PPPP PP
Sbjct: 304 PITGGPPPPPPPGGLPPITGG--PPPPPPPGGLPP 336
Score = 28.7 bits (61), Expect = 7.4
Identities = 14/32 (43%), Positives = 14/32 (43%), Gaps = 2/32 (6%)
Frame = +3
Query: 366 PXXPPXRGG--XGXXPPXXGGRXXXPPPPXXP 455
P PP GG PP GG PPPP P
Sbjct: 342 PPPPPPPGGCPPPPPPPPPGGFKGGPPPPPPP 373
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 34.7 bits (76), Expect = 0.11
Identities = 17/41 (41%), Positives = 18/41 (43%), Gaps = 4/41 (9%)
Frame = +3
Query: 360 PLPXXPPXRGGX----GXXPPXXGGRXXXPPPPXXPXPPPR 470
P+ PP GG G PP GG PPP PPPR
Sbjct: 1555 PMGGLPPPHGGMNGWRGGPPPPRGGSHCQGPPPLMGGPPPR 1595
Score = 29.1 bits (62), Expect = 5.6
Identities = 14/31 (45%), Positives = 14/31 (45%)
Frame = +3
Query: 375 PPXRGGXGXXPPXXGGRXXXPPPPXXPXPPP 467
PP GG PP G PPPP PPP
Sbjct: 1586 PPLMGGP---PPRLGMPPPGPPPPNGGPPPP 1613
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 32.7 bits (71), Expect = 0.46
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = +3
Query: 360 PLPXXPPXRGGXGXXPPXXGGRXXXPPP-PXXPXPPP 467
P P PP G PP GR PP P P PPP
Sbjct: 285 PRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP 321
Score = 28.3 bits (60), Expect = 9.8
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +3
Query: 360 PLPXXPPXRGGXGXXPPXXGGRXXXPPPPXXPXPPPR 470
P+P P G PP PPPP P PP R
Sbjct: 272 PMPPPMPPTPGMTPRPPPPPSSGMWPPPP--PPPPGR 306
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 32.7 bits (71), Expect = 0.46
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = +3
Query: 360 PLPXXPPXRGGXGXXPPXXGGRXXXPPP-PXXPXPPP 467
P P PP G PP GR PP P P PPP
Sbjct: 295 PRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPP 331
Score = 28.3 bits (60), Expect = 9.8
Identities = 14/37 (37%), Positives = 15/37 (40%)
Frame = +3
Query: 360 PLPXXPPXRGGXGXXPPXXGGRXXXPPPPXXPXPPPR 470
P+P P G PP PPPP P PP R
Sbjct: 282 PMPPPMPPTPGMTPRPPPPPSSGMWPPPP--PPPPGR 316
>U23172-13|ABH03527.1| 282|Caenorhabditis elegans Hypothetical
protein F25B5.7c protein.
Length = 282
Score = 31.5 bits (68), Expect = 1.1
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -3
Query: 463 GGXGXXGGGGXXXRPPXXGGXXPXPPRXGGXXGRG 359
GG G G G PP GG PP GG G G
Sbjct: 178 GGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPG 212
>U23172-12|ABH03526.1| 562|Caenorhabditis elegans Hypothetical
protein F25B5.7a protein.
Length = 562
Score = 31.5 bits (68), Expect = 1.1
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -3
Query: 463 GGXGXXGGGGXXXRPPXXGGXXPXPPRXGGXXGRG 359
GG G G G PP GG PP GG G G
Sbjct: 458 GGMGGPPGHGGQGGPPGHGGMGGPPPGQGGPGGPG 492
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 31.5 bits (68), Expect = 1.1
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -3
Query: 466 GGGXGXXGGGGXXXRPPXXGGXXPXPPRXGGXXGR 362
GGG G GGGG G P PP G GR
Sbjct: 189 GGGGGGMGGGGGSGGSGGGSGRFPPPPPPYGGGGR 223
Score = 31.1 bits (67), Expect = 1.4
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -3
Query: 466 GGGXGXXGGGGXXXRPPXXGGXXPXPPRXGGXXGR 362
GGG G GGGG G P PP GG R
Sbjct: 190 GGGGGMGGGGGSGGSGGGSGRFPPPPPPYGGGGRR 224
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 31.1 bits (67), Expect = 1.4
Identities = 17/39 (43%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
Frame = -3
Query: 466 GGGXGXXGGGGXXXRPPXXGG---XXPXPPRXGGXXGRG 359
GGG G GGGG GG P PP GG G G
Sbjct: 87 GGGGGCGGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGG 125
Score = 28.3 bits (60), Expect = 9.8
Identities = 16/38 (42%), Positives = 16/38 (42%), Gaps = 2/38 (5%)
Frame = -3
Query: 466 GGGXGXXGGGGXXXRPPXXGG--XXPXPPRXGGXXGRG 359
G G G GGGG GG P PP GG G G
Sbjct: 31 GCGGGCGGGGGCGGGGGCGGGCAPPPPPPACGGGCGGG 68
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 30.7 bits (66), Expect = 1.8
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 375 PPXRGGXGXXPPXXGGRXXXPPPPXXPXPPP 467
PP GG PP G PPP PPP
Sbjct: 77 PPGPGGIPPPPPMFAGGIPPPPPMMGGIPPP 107
Score = 30.7 bits (66), Expect = 1.8
Identities = 14/34 (41%), Positives = 14/34 (41%)
Frame = +3
Query: 366 PXXPPXRGGXGXXPPXXGGRXXXPPPPXXPXPPP 467
P P GG PP GG PP P PPP
Sbjct: 85 PPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPP 118
Score = 29.1 bits (62), Expect = 5.6
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +3
Query: 363 LPXXPPXRGGXGXXPPXXGGRXXXPPPPXXPXPPP 467
+P PP G PP G PPP PPP
Sbjct: 83 IPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPP 117
Score = 29.1 bits (62), Expect = 5.6
Identities = 14/37 (37%), Positives = 15/37 (40%), Gaps = 3/37 (8%)
Frame = +3
Query: 363 LPXXPPXRGGXGXXPPXXGGRXXXPPPP---XXPXPP 464
+P PP GG PP G PPP P PP
Sbjct: 94 IPPPPPMMGGIPPPPPMFGAPPPPPPPSGLGVAPQPP 130
Score = 29.1 bits (62), Expect = 5.6
Identities = 10/17 (58%), Positives = 11/17 (64%)
Frame = +1
Query: 316 PPPPPLXXXPPPNXSPS 366
PPPPP+ PPP PS
Sbjct: 105 PPPPPMFGAPPPPPPPS 121
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.8
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -3
Query: 466 GGGXGXXGGGGXXXRPPXXGGXXPXPPRXGGXXGRG 359
GGG G GGGG GG P GG G G
Sbjct: 160 GGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGG 195
Score = 29.5 bits (63), Expect = 4.3
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -3
Query: 466 GGGXGXXGGGGXXXRPPXXGGXXPXPPRXGGXXGRG 359
GGG G GGG GG P P GG G G
Sbjct: 27 GGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGG 62
Score = 28.7 bits (61), Expect = 7.4
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = -3
Query: 484 PPXXXRGGGXGXXGGGGXXXRPPXXGGXXPXPPRXGGXXGRG 359
PP GGG G GGG GG P P GG G G
Sbjct: 50 PPPAPCGGGCGGGGGGCG-----GGGGCAPPPAPCGGGCGGG 86
Score = 28.7 bits (61), Expect = 7.4
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -3
Query: 466 GGGXGXXGGGGXXXRPPXXGGXXPXPPRXGGXXGRGXC 353
GGG G GGGG PP G G G G C
Sbjct: 60 GGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGC 97
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.7 bits (66), Expect = 1.8
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -3
Query: 466 GGGXGXXGGGGXXXRPPXXGGXXPXPPRXGGXXGRG 359
GGG G GGGG GG P GG G G
Sbjct: 160 GGGCGGGGGGGCGGGSSGGGGYAVAPSGGGGCGGGG 195
Score = 29.5 bits (63), Expect = 4.3
Identities = 15/36 (41%), Positives = 15/36 (41%)
Frame = -3
Query: 466 GGGXGXXGGGGXXXRPPXXGGXXPXPPRXGGXXGRG 359
GGG G GGG GG P P GG G G
Sbjct: 27 GGGGGGGCGGGCGGGCGGGGGCAPPPAPCGGGCGGG 62
Score = 28.7 bits (61), Expect = 7.4
Identities = 17/42 (40%), Positives = 17/42 (40%)
Frame = -3
Query: 484 PPXXXRGGGXGXXGGGGXXXRPPXXGGXXPXPPRXGGXXGRG 359
PP GGG G GGG GG P P GG G G
Sbjct: 50 PPPAPCGGGCGGGGGGCG-----GGGGCAPPPAPCGGGCGGG 86
Score = 28.7 bits (61), Expect = 7.4
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = -3
Query: 466 GGGXGXXGGGGXXXRPPXXGGXXPXPPRXGGXXGRGXC 353
GGG G GGGG PP G G G G C
Sbjct: 60 GGGGGGCGGGGGCAPPPAPCGGGCGGGGGGCGGGGGGC 97
>U53153-1|AAC69039.4| 715|Caenorhabditis elegans Hypothetical
protein T19A5.3a protein.
Length = 715
Score = 30.7 bits (66), Expect = 1.8
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -3
Query: 466 GGGXGXXGGGGXXXRPPXXGGXXPXPP 386
GGG G GGGG GG P PP
Sbjct: 491 GGGGGFGGGGGGFGSGSPFGGAAPSPP 517
>AL110477-13|CAB54337.2| 789|Caenorhabditis elegans Hypothetical
protein Y113G7B.23 protein.
Length = 789
Score = 30.7 bits (66), Expect = 1.8
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = +3
Query: 378 PXRGGXGXXPPXXGGRXXX-PPPPXXPXPPP 467
P GG G PP G + PPPP P PP
Sbjct: 673 PPGGGQGPPPPPQGQQYYGGPPPPGQPYGPP 703
>AF230279-1|AAG16654.1| 789|Caenorhabditis elegans SWI3-like
protein protein.
Length = 789
Score = 30.7 bits (66), Expect = 1.8
Identities = 14/31 (45%), Positives = 15/31 (48%), Gaps = 1/31 (3%)
Frame = +3
Query: 378 PXRGGXGXXPPXXGGRXXX-PPPPXXPXPPP 467
P GG G PP G + PPPP P PP
Sbjct: 673 PPGGGQGPPPPPQGQQYYGGPPPPGQPYGPP 703
>Z95559-4|CAB09004.1| 110|Caenorhabditis elegans Hypothetical
protein Y41E3.8 protein.
Length = 110
Score = 30.3 bits (65), Expect = 2.4
Identities = 16/39 (41%), Positives = 16/39 (41%)
Frame = -3
Query: 469 RGGGXGXXGGGGXXXRPPXXGGXXPXPPRXGGXXGRGXC 353
R G G GGG P G P PP GG G G C
Sbjct: 72 RRNGGGGGGGGRNIGGLPTSSGVAP-PPMGGGCCGGGGC 109
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 30.3 bits (65), Expect = 2.4
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 2/37 (5%)
Frame = +3
Query: 366 PXXPPXRGGX--GXXPPXXGGRXXXPPPPXXPXPPPR 470
P PP RG G PP G P P PPPR
Sbjct: 298 PPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPR 334
Score = 29.9 bits (64), Expect = 3.2
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +3
Query: 366 PXXPPXRGGXGXXPPXXGGRXXXPPPPXXPXPPPR 470
P PP +G PP G PPP PPPR
Sbjct: 238 PPPPPPKGS----PPLAGSGSPPPPPAAGSPPPPR 268
Score = 29.9 bits (64), Expect = 3.2
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +3
Query: 360 PLPXXPPXRGGXGXXPPXXGGRXXXPPPPXXPXPPP 467
P P P G G PP PP P PPP
Sbjct: 241 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP 276
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 30.3 bits (65), Expect = 2.4
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 2/37 (5%)
Frame = +3
Query: 366 PXXPPXRGGX--GXXPPXXGGRXXXPPPPXXPXPPPR 470
P PP RG G PP G P P PPPR
Sbjct: 319 PPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPR 355
Score = 29.9 bits (64), Expect = 3.2
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +3
Query: 366 PXXPPXRGGXGXXPPXXGGRXXXPPPPXXPXPPPR 470
P PP +G PP G PPP PPPR
Sbjct: 259 PPPPPPKGS----PPLAGSGSPPPPPAAGSPPPPR 289
Score = 29.9 bits (64), Expect = 3.2
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +3
Query: 360 PLPXXPPXRGGXGXXPPXXGGRXXXPPPPXXPXPPP 467
P P P G G PP PP P PPP
Sbjct: 262 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP 297
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 30.3 bits (65), Expect = 2.4
Identities = 15/37 (40%), Positives = 15/37 (40%), Gaps = 2/37 (5%)
Frame = +3
Query: 366 PXXPPXRGGX--GXXPPXXGGRXXXPPPPXXPXPPPR 470
P PP RG G PP G P P PPPR
Sbjct: 304 PPPPPPRGSPPTGSLPPPQAGGSPPPAGTGSPPPPPR 340
Score = 29.9 bits (64), Expect = 3.2
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +3
Query: 366 PXXPPXRGGXGXXPPXXGGRXXXPPPPXXPXPPPR 470
P PP +G PP G PPP PPPR
Sbjct: 244 PPPPPPKGS----PPLAGSGSPPPPPAAGSPPPPR 274
Score = 29.9 bits (64), Expect = 3.2
Identities = 13/36 (36%), Positives = 13/36 (36%)
Frame = +3
Query: 360 PLPXXPPXRGGXGXXPPXXGGRXXXPPPPXXPXPPP 467
P P P G G PP PP P PPP
Sbjct: 247 PPPKGSPPLAGSGSPPPPPAAGSPPPPRTGSPPPPP 282
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 29.9 bits (64), Expect = 3.2
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +3
Query: 366 PXXPPXRGGXGXXPPXXGGRXXXPPPPXXPXPPPR 470
P PP PP G PPPP PPP+
Sbjct: 696 PGVPPMFNLNAPPPPGIPGYPPAPPPPGVGPPPPQ 730
>Z82274-16|CAC70096.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 29.5 bits (63), Expect = 4.3
Identities = 16/33 (48%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +3
Query: 375 PPXRGGX-GXXPPXXGGRXXXPPPPXXPXPPPR 470
PP RG G PP R PPPP P PPR
Sbjct: 1084 PPTRGASVGPGPPAVPVRKAPPPPPR-PVIPPR 1115
>Z82274-15|CAB05234.2| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 29.5 bits (63), Expect = 4.3
Identities = 16/33 (48%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +3
Query: 375 PPXRGGX-GXXPPXXGGRXXXPPPPXXPXPPPR 470
PP RG G PP R PPPP P PPR
Sbjct: 1078 PPTRGASVGPGPPAVPVRKAPPPPPR-PVIPPR 1109
>AL132951-13|CAC70127.1| 1119|Caenorhabditis elegans Hypothetical
protein JC8.10b protein.
Length = 1119
Score = 29.5 bits (63), Expect = 4.3
Identities = 16/33 (48%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +3
Query: 375 PPXRGGX-GXXPPXXGGRXXXPPPPXXPXPPPR 470
PP RG G PP R PPPP P PPR
Sbjct: 1084 PPTRGASVGPGPPAVPVRKAPPPPPR-PVIPPR 1115
>AL132951-12|CAC44311.1| 1113|Caenorhabditis elegans Hypothetical
protein JC8.10a protein.
Length = 1113
Score = 29.5 bits (63), Expect = 4.3
Identities = 16/33 (48%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +3
Query: 375 PPXRGGX-GXXPPXXGGRXXXPPPPXXPXPPPR 470
PP RG G PP R PPPP P PPR
Sbjct: 1078 PPTRGASVGPGPPAVPVRKAPPPPPR-PVIPPR 1109
>AL132860-21|CAB60518.2| 759|Caenorhabditis elegans Hypothetical
protein Y56A3A.27 protein.
Length = 759
Score = 29.5 bits (63), Expect = 4.3
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 5/33 (15%)
Frame = -3
Query: 466 GGGXGXXGGGGXXXRPPXXGG-----XXPXPPR 383
GGG G GGGG R P GG P PP+
Sbjct: 615 GGGPGGPGGGGGPPRGPGGGGGGGPTGPPAPPK 647
>AF283323-1|AAG18575.1| 1113|Caenorhabditis elegans synaptojanin
UNC-26B protein.
Length = 1113
Score = 29.5 bits (63), Expect = 4.3
Identities = 16/33 (48%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +3
Query: 375 PPXRGGX-GXXPPXXGGRXXXPPPPXXPXPPPR 470
PP RG G PP R PPPP P PPR
Sbjct: 1078 PPTRGASVGPGPPAVPVRKAPPPPPR-PVIPPR 1109
>AF283322-1|AAG18574.1| 1119|Caenorhabditis elegans synaptojanin
UNC-26A protein.
Length = 1119
Score = 29.5 bits (63), Expect = 4.3
Identities = 16/33 (48%), Positives = 16/33 (48%), Gaps = 1/33 (3%)
Frame = +3
Query: 375 PPXRGGX-GXXPPXXGGRXXXPPPPXXPXPPPR 470
PP RG G PP R PPPP P PPR
Sbjct: 1084 PPTRGASVGPGPPAVPVRKAPPPPPR-PVIPPR 1115
>AF057032-1|AAC13567.1| 759|Caenorhabditis elegans DNA
topoisomerase III protein.
Length = 759
Score = 29.5 bits (63), Expect = 4.3
Identities = 15/33 (45%), Positives = 16/33 (48%), Gaps = 5/33 (15%)
Frame = -3
Query: 466 GGGXGXXGGGGXXXRPPXXGG-----XXPXPPR 383
GGG G GGGG R P GG P PP+
Sbjct: 615 GGGPGGPGGGGGPPRGPGGGGGGGPTGPPAPPK 647
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 29.1 bits (62), Expect = 5.6
Identities = 14/37 (37%), Positives = 14/37 (37%)
Frame = +3
Query: 357 LPLPXXPPXRGGXGXXPPXXGGRXXXPPPPXXPXPPP 467
LP P P PP PPPP P PPP
Sbjct: 43 LPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPPPP 79
Score = 28.7 bits (61), Expect = 7.4
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = +3
Query: 360 PLPXXPPXRGGXGXXPPXXGGRXXXPPPPXXPXPPP 467
PLP PP PP PPPP PPP
Sbjct: 42 PLPCPPPPICPPQFCPPPPMCPPPPPPPPPPMCPPP 77
>AL032637-18|CAE17998.1| 193|Caenorhabditis elegans Hypothetical
protein Y43F8C.20 protein.
Length = 193
Score = 28.7 bits (61), Expect = 7.4
Identities = 14/36 (38%), Positives = 14/36 (38%)
Frame = -3
Query: 466 GGGXGXXGGGGXXXRPPXXGGXXPXPPRXGGXXGRG 359
GGG G G GG PP G GG G G
Sbjct: 133 GGGRGGGGRGGDGRGPPGSNGGGDWGGNGGGGRGGG 168
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 28.7 bits (61), Expect = 7.4
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +3
Query: 375 PPXRGGXGXXPPXXGGRXXXPPPPXXPXPP 464
PP RG PP GR PPP P PP
Sbjct: 298 PPPRGHFPPPPPHFMGRGM--PPPFMPPPP 325
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 28.7 bits (61), Expect = 7.4
Identities = 14/30 (46%), Positives = 14/30 (46%)
Frame = +3
Query: 375 PPXRGGXGXXPPXXGGRXXXPPPPXXPXPP 464
PP RG PP GR PPP P PP
Sbjct: 298 PPPRGHFPPPPPHFMGRGM--PPPFMPPPP 325
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 28.7 bits (61), Expect = 7.4
Identities = 14/37 (37%), Positives = 14/37 (37%), Gaps = 2/37 (5%)
Frame = +3
Query: 360 PLPXXPPXRGGXGXXP--PXXGGRXXXPPPPXXPXPP 464
P P P G P P G PPPP P PP
Sbjct: 183 PGPPGPDGNAGPAGAPGVPGPDGDAGSPPPPGPPGPP 219
>U50310-5|AAA92541.1| 318|Caenorhabditis elegans Ground-like (grd
related) protein 9 protein.
Length = 318
Score = 25.4 bits (53), Expect(2) = 8.7
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = +3
Query: 435 PPPPXXPXPPP 467
PPPP P PPP
Sbjct: 134 PPPPPSPPPPP 144
Score = 21.4 bits (43), Expect(2) = 8.7
Identities = 8/17 (47%), Positives = 8/17 (47%)
Frame = +3
Query: 360 PLPXXPPXRGGXGXXPP 410
PLP PP G PP
Sbjct: 80 PLPGSPPGMAGPPLLPP 96
>Z68106-3|CAA92127.1| 74|Caenorhabditis elegans Hypothetical
protein F41E7.4 protein.
Length = 74
Score = 28.3 bits (60), Expect = 9.8
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = -3
Query: 469 RGGGXGXXGGGGXXXRPPXXGGXXPXPPRXGGXXGR 362
RGGG G GGG P P PPR G GR
Sbjct: 31 RGGGGGFGGGGFGRPAP-----FRPPPPRFGPSFGR 61
>Z67990-1|CAA91932.1| 316|Caenorhabditis elegans Hypothetical
protein F02D10.1 protein.
Length = 316
Score = 28.3 bits (60), Expect = 9.8
Identities = 16/41 (39%), Positives = 17/41 (41%), Gaps = 6/41 (14%)
Frame = -3
Query: 466 GGGXGXXGGGGXXXRPPXXGGXX------PXPPRXGGXXGR 362
GGG G GGGG GG P PP GG G+
Sbjct: 90 GGGYGAGGGGGGGGGEAAGGGGGCTGCCNPGPPGPGGRPGK 130
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.312 0.148 0.520
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 7,890,315
Number of Sequences: 27780
Number of extensions: 126156
Number of successful extensions: 2375
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 573
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1975
length of database: 12,740,198
effective HSP length: 82
effective length of database: 10,462,238
effective search space used: 2845728736
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.2 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 42 (21.6 bits)
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