Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_K12
(880 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 41 2e-04
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 40 5e-04
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 40 6e-04
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 39 8e-04
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 36 0.006
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 36 0.006
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 35 0.013
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 33 0.054
SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces pomb... 33 0.071
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 27 0.090
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 31 0.16
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 29 0.87
SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase Tor2|S... 29 0.87
SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyc... 29 1.2
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 27 2.7
SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyc... 26 6.1
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 26 6.1
SPAC17G8.01c |trl1|SPAC6C3.10c|tRNA ligase Trl1 |Schizosaccharom... 26 8.1
SPBC887.19 |rft1||human RFT1 ortholog |Schizosaccharomyces pombe... 26 8.1
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 41.1 bits (92), Expect = 2e-04
Identities = 20/45 (44%), Positives = 20/45 (44%)
Frame = -3
Query: 860 GXGRGXRGEXGXGXXGXXGXGXGGGXGGXXGGGGXGGXXXGXGGG 726
G G RG G G G G G GG GG G GG G G GG
Sbjct: 19 GGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGG 63
Score = 37.9 bits (84), Expect = 0.002
Identities = 20/43 (46%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Frame = -3
Query: 854 GRGXRGEXGXGXXGXXGXGXGGGXGGXXGG-GGXGGXXXGXGG 729
GRG G G G GGG GG GG GG GG G GG
Sbjct: 17 GRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGG 59
Score = 35.9 bits (79), Expect = 0.008
Identities = 21/43 (48%), Positives = 21/43 (48%), Gaps = 2/43 (4%)
Frame = -3
Query: 851 RGXRGEXGXGXXGXXGX--GXGGGXGGXXGGGGXGGXXXGXGG 729
RG RG G G G G GGG GG GGG GG G GG
Sbjct: 8 RGGRGGSRGGRGGFNGGRGGFGGGRGGAR-GGGRGGARGGRGG 49
Score = 34.3 bits (75), Expect = 0.023
Identities = 19/45 (42%), Positives = 19/45 (42%)
Frame = -3
Query: 860 GXGRGXRGEXGXGXXGXXGXGXGGGXGGXXGGGGXGGXXXGXGGG 726
G G G G G G G G G GG G G GG G G GG
Sbjct: 27 GFGGGRGGARGGGRGGARG-GRGGRGGARGGRGGSSGGRGGAKGG 70
Score = 29.1 bits (62), Expect = 0.87
Identities = 19/40 (47%), Positives = 19/40 (47%)
Frame = -3
Query: 848 GXRGEXGXGXXGXXGXGXGGGXGGXXGGGGXGGXXXGXGG 729
G RG G G G G G GG GG GGG G G GG
Sbjct: 6 GSRGGRG-GSRGGRG-GFNGGRGGF-GGGRGGARGGGRGG 42
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 39.9 bits (89), Expect = 5e-04
Identities = 16/38 (42%), Positives = 16/38 (42%)
Frame = +1
Query: 727 PPPXPXXXPPXPPPPXXPPXPPPXPXPXXPXXPXPXSP 840
PPP P PP P P P PP P P P P P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 34.3 bits (75), Expect = 0.023
Identities = 20/48 (41%), Positives = 20/48 (41%), Gaps = 6/48 (12%)
Frame = +1
Query: 730 PPXPXXXPPXPPPPXXPPXP--PPXP--XPXXPXXPXPXS--PRXPRP 855
PP P PPP PP P PP P P P P P S P P P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 29.5 bits (63), Expect = 0.66
Identities = 16/49 (32%), Positives = 16/49 (32%), Gaps = 5/49 (10%)
Frame = +1
Query: 730 PPXPXXXPPXPPPPXXP-----PXPPPXPXPXXPXXPXPXSPRXPRPXP 861
P P PP P P P PPP P P P P P P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAP 1731
Score = 29.1 bits (62), Expect = 0.87
Identities = 14/45 (31%), Positives = 14/45 (31%)
Frame = +1
Query: 727 PPPXPXXXPPXPPPPXXPPXPPPXPXPXXPXXPXPXSPRXPRPXP 861
PP P P PP PP P P P P P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 39.5 bits (88), Expect = 6e-04
Identities = 16/37 (43%), Positives = 16/37 (43%)
Frame = +1
Query: 751 PPXPPPPXXPPXPPPXPXPXXPXXPXPXSPRXPRPXP 861
PP PPP P P P P P P P P P P P
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPP 768
Score = 35.5 bits (78), Expect = 0.010
Identities = 15/38 (39%), Positives = 15/38 (39%)
Frame = +1
Query: 727 PPPXPXXXPPXPPPPXXPPXPPPXPXPXXPXXPXPXSP 840
P P P PP P PP PPP P P P P
Sbjct: 744 PAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 34.7 bits (76), Expect = 0.018
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 6/55 (10%)
Frame = +1
Query: 727 PPPXPXXXPPXPPPPXXPPXPP------PXPXPXXPXXPXPXSPRXPRPXPXXGA 873
PPP P P P P P PP P P P P P P P P A
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSA 787
Score = 33.1 bits (72), Expect = 0.054
Identities = 17/47 (36%), Positives = 17/47 (36%), Gaps = 1/47 (2%)
Frame = +1
Query: 733 PXPXXXP-PXPPPPXXPPXPPPXPXPXXPXXPXPXSPRXPRPXPXXG 870
P P P P PPP PPP P P P P P P G
Sbjct: 742 PTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPPAVSAG 788
Score = 28.3 bits (60), Expect = 1.5
Identities = 13/42 (30%), Positives = 15/42 (35%)
Frame = +1
Query: 727 PPPXPXXXPPXPPPPXXPPXPPPXPXPXXPXXPXPXSPRXPR 852
PPP P PPP PP P P P + P+
Sbjct: 763 PPPPPPGVAGAGPPPPPPPPPAVSAGGSRYYAPAPQAEPEPK 804
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 39.1 bits (87), Expect = 8e-04
Identities = 20/45 (44%), Positives = 20/45 (44%)
Frame = -3
Query: 860 GXGRGXRGEXGXGXXGXXGXGXGGGXGGXXGGGGXGGXXXGXGGG 726
G RG RG G G G GGG G GGG GG G GG
Sbjct: 141 GGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGG 185
Score = 37.5 bits (83), Expect = 0.002
Identities = 20/43 (46%), Positives = 20/43 (46%)
Frame = -3
Query: 854 GRGXRGEXGXGXXGXXGXGXGGGXGGXXGGGGXGGXXXGXGGG 726
GRG RG G G G G GG G GGG GG G GG
Sbjct: 136 GRGGRGGFRGGRGGSRG-GFGGNSRGGFGGGSRGGFGGGSRGG 177
Score = 29.9 bits (64), Expect = 0.50
Identities = 16/37 (43%), Positives = 16/37 (43%), Gaps = 1/37 (2%)
Frame = -3
Query: 860 GXGRGXRGEXGXGXXGXXGXGX-GGGXGGXXGGGGXG 753
G G RG G G G G G GG GG GG G
Sbjct: 153 GFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGG 189
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 36.3 bits (80), Expect = 0.006
Identities = 17/46 (36%), Positives = 18/46 (39%), Gaps = 1/46 (2%)
Frame = +1
Query: 727 PPPXPXXXPPXPPP-PXXPPXPPPXPXPXXPXXPXPXSPRXPRPXP 861
PPP P PP P P P PP P P P +P P P
Sbjct: 150 PPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVP 195
Score = 30.7 bits (66), Expect = 0.29
Identities = 16/42 (38%), Positives = 17/42 (40%)
Frame = +1
Query: 730 PPXPXXXPPXPPPPXXPPXPPPXPXPXXPXXPXPXSPRXPRP 855
PP P PP P P P PP P P P P+ P P
Sbjct: 165 PPIPSSLPP-PAQPAAPVKSPP-SAPSLPSAVPPMPPKVPPP 204
Score = 28.7 bits (61), Expect = 1.2
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 2/45 (4%)
Frame = +1
Query: 727 PPPXPXXXPPXPPPPXXPPXPPPXP--XPXXPXXPXPXSPRXPRP 855
P P PP PP P PPP P P P P P P
Sbjct: 131 PTPQSELRPPTSAPPR-PSIPPPSPASAPPIPSKAPPIPSSLPPP 174
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/46 (32%), Positives = 15/46 (32%), Gaps = 1/46 (2%)
Frame = +1
Query: 727 PPPXPXXXPPXPPP-PXXPPXPPPXPXPXXPXXPXPXSPRXPRPXP 861
PP P PPP P P P P P P P P P
Sbjct: 139 PPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSP 184
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/42 (33%), Positives = 15/42 (35%), Gaps = 2/42 (4%)
Frame = +1
Query: 730 PPXPXXXPPXPP--PPXXPPXPPPXPXPXXPXXPXPXSPRXP 849
P P PP P P PP PP P P P + P
Sbjct: 177 PAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRP 218
Score = 28.3 bits (60), Expect = 1.5
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 5/45 (11%)
Frame = +1
Query: 730 PPXPXXXPPXPPP-PXXPPXPPP----XPXPXXPXXPXPXSPRXP 849
PP P PP P P P PP P P P P P P
Sbjct: 144 PPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAP 188
Score = 27.9 bits (59), Expect = 2.0
Identities = 15/40 (37%), Positives = 16/40 (40%), Gaps = 2/40 (5%)
Frame = +1
Query: 727 PPPXPXXXPPXPPP--PXXPPXPPPXPXPXXPXXPXPXSP 840
PPP P PP P P PP P P P P +P
Sbjct: 172 PPPAQPAAPVKSPPSAPSLPSAVPPMP-PKVPPPPLSQAP 210
Score = 26.2 bits (55), Expect = 6.1
Identities = 15/45 (33%), Positives = 16/45 (35%)
Frame = +1
Query: 727 PPPXPXXXPPXPPPPXXPPXPPPXPXPXXPXXPXPXSPRXPRPXP 861
PP P PP P PP P P P P +P P P
Sbjct: 124 PPSAPA--PPTPQSELRPPTSAP-PRPSIPPPSPASAPPIPSKAP 165
Score = 26.2 bits (55), Expect = 6.1
Identities = 13/40 (32%), Positives = 14/40 (35%)
Frame = +1
Query: 730 PPXPXXXPPXPPPPXXPPXPPPXPXPXXPXXPXPXSPRXP 849
PP P PP P P P P P P P + P
Sbjct: 172 PPPAQPAAPVKSPPSAPSLPSAVP-PMPPKVPPPPLSQAP 210
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 36.3 bits (80), Expect = 0.006
Identities = 16/45 (35%), Positives = 17/45 (37%)
Frame = +1
Query: 727 PPPXPXXXPPXPPPPXXPPXPPPXPXPXXPXXPXPXSPRXPRPXP 861
PP P P PP P P PP P P P + P P P
Sbjct: 436 PPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAP 480
Score = 35.1 bits (77), Expect = 0.013
Identities = 16/41 (39%), Positives = 17/41 (41%)
Frame = +1
Query: 730 PPXPXXXPPXPPPPXXPPXPPPXPXPXXPXXPXPXSPRXPR 852
PP P P PP P P PPP P P P P P+
Sbjct: 457 PPLPAGMPAAPPLPPAAPAPPPAPAP-APAAPVASIAELPQ 496
Score = 34.7 bits (76), Expect = 0.018
Identities = 16/45 (35%), Positives = 16/45 (35%)
Frame = +1
Query: 727 PPPXPXXXPPXPPPPXXPPXPPPXPXPXXPXXPXPXSPRXPRPXP 861
P P P PP PP P PP P P P S P P
Sbjct: 416 PVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLP 460
Score = 33.5 bits (73), Expect = 0.041
Identities = 15/38 (39%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Frame = +1
Query: 730 PPXPXXXPPXPPP-PXXPPXPPPXPXPXXPXXPXPXSP 840
PP PP P P PP PP P P P P +P
Sbjct: 450 PPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 33.1 bits (72), Expect = 0.054
Identities = 16/43 (37%), Positives = 17/43 (39%)
Frame = +1
Query: 727 PPPXPXXXPPXPPPPXXPPXPPPXPXPXXPXXPXPXSPRXPRP 855
PP P PP P P PPP P P P + PRP
Sbjct: 233 PPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPN-SPPRP 274
Score = 32.3 bits (70), Expect = 0.094
Identities = 15/37 (40%), Positives = 16/37 (43%)
Frame = +1
Query: 751 PPXPPPPXXPPXPPPXPXPXXPXXPXPXSPRXPRPXP 861
PP P PP PP PP P P +P P P P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAP-PLP 450
Score = 31.5 bits (68), Expect = 0.16
Identities = 19/51 (37%), Positives = 20/51 (39%), Gaps = 6/51 (11%)
Frame = +1
Query: 727 PPPXPXXXPPXPPP--PXXPPXPPPXP--XPXXPXXP--XPXSPRXPRPXP 861
PP P PP PP P P PP P P P P P +P P P
Sbjct: 424 PPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/40 (37%), Positives = 15/40 (37%), Gaps = 3/40 (7%)
Frame = +1
Query: 727 PPPXPXXXPPXPPPPXX---PPXPPPXPXPXXPXXPXPXS 837
PPP P PP PP PPP P P P S
Sbjct: 341 PPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLS 380
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/45 (31%), Positives = 15/45 (33%)
Frame = +1
Query: 727 PPPXPXXXPPXPPPPXXPPXPPPXPXPXXPXXPXPXSPRXPRPXP 861
PP P PP PP P P P P +P P P
Sbjct: 420 PPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMP 464
Score = 26.6 bits (56), Expect = 4.7
Identities = 15/48 (31%), Positives = 15/48 (31%)
Frame = +1
Query: 730 PPXPXXXPPXPPPPXXPPXPPPXPXPXXPXXPXPXSPRXPRPXPXXGA 873
PP PP PPPP P P P P P P A
Sbjct: 354 PPQGRSAPP-PPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSA 400
Score = 25.8 bits (54), Expect = 8.1
Identities = 16/46 (34%), Positives = 17/46 (36%), Gaps = 1/46 (2%)
Frame = +1
Query: 727 PPPXPXXXPPXPPPPXXPPXPPPXPXPXXPXXPXPXS-PRXPRPXP 861
PPP P PP PP PP P P S + P P P
Sbjct: 253 PPPIP---PPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPPP 295
Score = 25.8 bits (54), Expect = 8.1
Identities = 13/45 (28%), Positives = 13/45 (28%)
Frame = +1
Query: 727 PPPXPXXXPPXPPPPXXPPXPPPXPXPXXPXXPXPXSPRXPRPXP 861
PP P P PP P P P P P P P
Sbjct: 392 PPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAP 436
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 35.1 bits (77), Expect = 0.013
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = +1
Query: 727 PPPXPXXXPPXPPPPXXPPXPPPXPXPXXPXXPXPXSPRXPRPXP 861
P P P P PPP P P P P P P P + P P P
Sbjct: 1199 PVPKPSVGVPPVPPPSTAP-PVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 34.7 bits (76), Expect = 0.018
Identities = 17/45 (37%), Positives = 18/45 (40%)
Frame = +1
Query: 727 PPPXPXXXPPXPPPPXXPPXPPPXPXPXXPXXPXPXSPRXPRPXP 861
P P P PP P P P P P P P P P + P P P
Sbjct: 1151 PVPAPSGAPPVPKPSVAAP-PVPAPSSGIPPVPKPAAGVPPVPPP 1194
Score = 34.3 bits (75), Expect = 0.023
Identities = 22/56 (39%), Positives = 22/56 (39%), Gaps = 8/56 (14%)
Frame = +1
Query: 727 PPPXPXXXPPXPPPPXX-PPXP-----PPXPXP--XXPXXPXPXSPRXPRPXPXXG 870
P P P PP P P PP P PP P P P P P S P P P G
Sbjct: 1132 PVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAG 1187
Score = 34.3 bits (75), Expect = 0.023
Identities = 18/44 (40%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = +1
Query: 727 PPPXPXXXPPXPPPP-XXPPXPPPXPXPXXPXXPXPXSPRXPRP 855
P P P PP P P PP PPP P P P P P P
Sbjct: 1190 PVPPPSEAPPVPKPSVGVPPVPPPSTAPPVP-TPSAGLPPVPVP 1232
Score = 33.5 bits (73), Expect = 0.041
Identities = 20/54 (37%), Positives = 20/54 (37%), Gaps = 7/54 (12%)
Frame = +1
Query: 733 PXPXXXPPXPPPPXXPPXP------PPXPXPXXPXXPXP-XSPRXPRPXPXXGA 873
P P PP P P PP P PP P P P P S P P P A
Sbjct: 1077 PAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAA 1130
Score = 33.5 bits (73), Expect = 0.041
Identities = 17/44 (38%), Positives = 19/44 (43%), Gaps = 1/44 (2%)
Frame = +1
Query: 727 PPPXPXXXPPXPPPPXXPPXPPPXPXPXXPXXPXP-XSPRXPRP 855
P P P PP P P P P P P P P P +P P+P
Sbjct: 1084 PVPAPSGIPPVPKPSVAAP-PVPKPSVAVPPVPAPSGAPPVPKP 1126
Score = 33.5 bits (73), Expect = 0.041
Identities = 19/48 (39%), Positives = 19/48 (39%)
Frame = +1
Query: 727 PPPXPXXXPPXPPPPXXPPXPPPXPXPXXPXXPXPXSPRXPRPXPXXG 870
P P P P PPP P P P P P P P S P P P G
Sbjct: 1180 PVPKPAAGVPPVPPPSEAP-PVPKPSVGVPPVP-PPSTAPPVPTPSAG 1225
Score = 32.7 bits (71), Expect = 0.071
Identities = 21/56 (37%), Positives = 21/56 (37%), Gaps = 8/56 (14%)
Frame = +1
Query: 727 PPPXPX-XXPPXPPPPXXPPXP------PPXPXP-XXPXXPXPXSPRXPRPXPXXG 870
P P P PP P P PP P PP P P P P P P P P G
Sbjct: 1122 PVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSG 1177
Score = 32.3 bits (70), Expect = 0.094
Identities = 17/46 (36%), Positives = 19/46 (41%), Gaps = 3/46 (6%)
Frame = +1
Query: 727 PPPXPX---XXPPXPPPPXXPPXPPPXPXPXXPXXPXPXSPRXPRP 855
PPP P P P P PP P P P P P +P P+P
Sbjct: 1063 PPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVP-KPSVAAPPVPKP 1107
Score = 31.9 bits (69), Expect = 0.12
Identities = 17/44 (38%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = +1
Query: 727 PPPXPXXXPPXPPPP-XXPPXPPPXPXPXXPXXPXPXSPRXPRP 855
P P P PP P P PP P P P P P +P P P
Sbjct: 1113 PVPAPSGAPPVPKPSVAAPPVPVPSGAPPVP-KPSVAAPPVPAP 1155
Score = 31.1 bits (67), Expect = 0.22
Identities = 17/48 (35%), Positives = 17/48 (35%), Gaps = 1/48 (2%)
Frame = +1
Query: 730 PPXPXXXPPXPPPPXXPPXPPPXPXPXXPXXP-XPXSPRXPRPXPXXG 870
PP P PP P PP P P P P S P P P G
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVG 1206
Score = 30.7 bits (66), Expect = 0.29
Identities = 18/47 (38%), Positives = 19/47 (40%), Gaps = 4/47 (8%)
Frame = +1
Query: 727 PPPXPXXXPPXP-PPPXXPPXPPPXPXP--XXPXXPXP-XSPRXPRP 855
P P P PP P P PPP P P P P P +P P P
Sbjct: 1042 PVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAP 1088
Score = 30.7 bits (66), Expect = 0.29
Identities = 15/37 (40%), Positives = 15/37 (40%)
Frame = +1
Query: 727 PPPXPXXXPPXPPPPXXPPXPPPXPXPXXPXXPXPXS 837
P P P PP P P P P P P P P P S
Sbjct: 1209 PVPPPSTAPPVPTPSAGLP-PVPVPTAKAPPVPAPSS 1244
Score = 30.3 bits (65), Expect = 0.38
Identities = 18/49 (36%), Positives = 18/49 (36%), Gaps = 1/49 (2%)
Frame = +1
Query: 730 PPXPXXXPPXPPPPXXPPXPPPXPXP-XXPXXPXPXSPRXPRPXPXXGA 873
PP P PP P PP P P P P P S P P GA
Sbjct: 1012 PPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPIPTS-TPPVPKSSSGA 1059
Score = 29.9 bits (64), Expect = 0.50
Identities = 16/45 (35%), Positives = 16/45 (35%), Gaps = 1/45 (2%)
Frame = +1
Query: 730 PPXPXXXPPXPPPPXXPPXPPPXPXPXX-PXXPXPXSPRXPRPXP 861
PP P PP P PP P P P P P P P P
Sbjct: 1169 PPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPP 1213
Score = 29.9 bits (64), Expect = 0.50
Identities = 18/45 (40%), Positives = 18/45 (40%), Gaps = 2/45 (4%)
Frame = +1
Query: 727 PPPXPXXX-PPXPPPPXX-PPXPPPXPXPXXPXXPXPXSPRXPRP 855
P P P PP P P PP PPP P P P P P P
Sbjct: 1170 PVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVP-KPSVGVPPVPPP 1213
Score = 29.5 bits (63), Expect = 0.66
Identities = 16/44 (36%), Positives = 18/44 (40%), Gaps = 1/44 (2%)
Frame = +1
Query: 727 PPPXPXXXPPXPPPPXXPPXPPPXPXPXXPXXPXP-XSPRXPRP 855
P P P P P P P P P P P P P +P P+P
Sbjct: 1103 PVPKPSVAVPPVPAPSGAP-PVPKPSVAAPPVPVPSGAPPVPKP 1145
Score = 26.6 bits (56), Expect = 4.7
Identities = 16/47 (34%), Positives = 17/47 (36%), Gaps = 3/47 (6%)
Frame = +1
Query: 730 PPXPXXXPPXPPPPXX---PPXPPPXPXPXXPXXPXPXSPRXPRPXP 861
PP P PP P PP P P P P +P P P P
Sbjct: 1022 PPVPLPSADAPPIPVPSTAPPVPIPTSTPPVP-KSSSGAPSAPPPVP 1067
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 33.1 bits (72), Expect = 0.054
Identities = 14/27 (51%), Positives = 14/27 (51%)
Frame = +1
Query: 727 PPPXPXXXPPXPPPPXXPPXPPPXPXP 807
PP P PP PPP PP PP P P
Sbjct: 5 PPGNPP--PPPPPPGFEPPSQPPPPPP 29
Score = 31.9 bits (69), Expect = 0.12
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 727 PPPXPXXXPPXPPPPXXPP 783
PPP P PP PPP PP
Sbjct: 12 PPPPPGFEPPSQPPPPPPP 30
Score = 31.5 bits (68), Expect = 0.16
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +1
Query: 766 PPXXPPXPPPXPXPXXPXXPXPXSP 840
PP PP PPP P P P P P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 29.9 bits (64), Expect = 0.50
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +1
Query: 751 PPXPPPPXXPPXPPPXPXPXXPXXPXP 831
PP PPP PP PP P P P P
Sbjct: 5 PPGNPPP--PPPPPGFEPPSQPPPPPP 29
>SPAC2F3.14c |||conserved fungal protein|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 331
Score = 32.7 bits (71), Expect = 0.071
Identities = 17/46 (36%), Positives = 17/46 (36%)
Frame = +1
Query: 718 LXXPPPXPXXXPPXPPPPXXPPXPPPXPXPXXPXXPXPXSPRXPRP 855
L PP P P P P PP P P P P P P P P
Sbjct: 103 LPREPPLPNEPVPEEPLPGEPPL-PDEPVPEEPLPGEPPLPNEPVP 147
Score = 31.5 bits (68), Expect = 0.16
Identities = 18/46 (39%), Positives = 18/46 (39%), Gaps = 3/46 (6%)
Frame = +1
Query: 733 PXPXXXP-PXPPPPXXP-PXPPPXPXPXXPXXPXPXSPRXP-RPXP 861
P P P P P P P P PP P P P P P P P P
Sbjct: 102 PLPREPPLPNEPVPEEPLPGEPPLPDEPVPEEPLPGEPPLPNEPVP 147
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 27.1 bits (57), Expect(2) = 0.090
Identities = 9/15 (60%), Positives = 9/15 (60%)
Frame = +1
Query: 739 PXXXPPXPPPPXXPP 783
P PP PPPP PP
Sbjct: 234 PLPAPPPPPPPTLPP 248
Score = 23.8 bits (49), Expect(2) = 0.090
Identities = 8/14 (57%), Positives = 8/14 (57%)
Frame = +1
Query: 760 PPPPXXPPXPPPXP 801
PPPP P PP P
Sbjct: 273 PPPPATPSQPPRPP 286
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 31.5 bits (68), Expect = 0.16
Identities = 15/48 (31%), Positives = 16/48 (33%)
Frame = +1
Query: 727 PPPXPXXXPPXPPPPXXPPXPPPXPXPXXPXXPXPXSPRXPRPXPXXG 870
PPP P P PP P P P +P P P P G
Sbjct: 1883 PPPPPMALPKAGPPSAAPTSALPPAGPPAGATAISGNPGMPAPVPLTG 1930
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 29.1 bits (62), Expect = 0.87
Identities = 18/42 (42%), Positives = 18/42 (42%), Gaps = 1/42 (2%)
Frame = -3
Query: 860 GXGRGXRGEXGX-GXXGXXGXGXGGGXGGXXGGGGXGGXXXG 738
G RG RG G G G G G GGG G GG G G
Sbjct: 447 GGSRGGRGGFGGRGGFGGRG-GFGGGRGRGRGGARSGNPNRG 487
>SPBC216.07c |tor2|SPBC646.01c|phosphatidylinositol kinase
Tor2|Schizosaccharomyces pombe|chr 2|||Manual
Length = 2337
Score = 29.1 bits (62), Expect = 0.87
Identities = 19/55 (34%), Positives = 31/55 (56%), Gaps = 2/55 (3%)
Frame = -1
Query: 352 HS*IFQ*FQLIQMEGLQICSCIFLSTQESFSEILSVEIYET*MMMMD--LLNWVL 194
H I Q +++Q+ GL C+ + L+ E+F +LS++ Y + D LL WVL
Sbjct: 1991 HEDIRQDERVMQLFGL--CNNLLLADPETFKRLLSIQRYPVIPLSPDSGLLGWVL 2043
>SPCC962.06c |bpb1|sf1|zinc finger protein Bpb1|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 587
Score = 28.7 bits (61), Expect = 1.2
Identities = 14/44 (31%), Positives = 15/44 (34%)
Frame = +1
Query: 730 PPXPXXXPPXPPPPXXPPXPPPXPXPXXPXXPXPXSPRXPRPXP 861
P P P PP PP P P P P P + P P
Sbjct: 484 PFIPGTSAPLPPTTFAPPGVPLPPIPGAPGMPNLNMSQPPMVPP 527
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 27.5 bits (58), Expect = 2.7
Identities = 13/22 (59%), Positives = 13/22 (59%)
Frame = -3
Query: 794 GGGXGGXXGGGGXGGXXXGXGG 729
GGG GG GGG GG G GG
Sbjct: 187 GGGFGGF--GGGSGGPPPGPGG 206
>SPAC26A3.16 |dph1|ucp5|UBA domain protein Dph1|Schizosaccharomyces
pombe|chr 1|||Manual
Length = 354
Score = 26.2 bits (55), Expect = 6.1
Identities = 14/28 (50%), Positives = 15/28 (53%)
Frame = -3
Query: 794 GGGXGGXXGGGGXGGXXXGXGGGXXSHT 711
GGG GG G GG GG G GG + T
Sbjct: 225 GGGLGG-AGLGGLGGAGLGGFGGANNAT 251
Score = 25.8 bits (54), Expect = 8.1
Identities = 12/30 (40%), Positives = 12/30 (40%)
Frame = -3
Query: 839 GEXGXGXXGXXGXGXGGGXGGXXGGGGXGG 750
G G G G GG G GG G GG
Sbjct: 214 GAAGIDPMSLMGGGLGGAGLGGLGGAGLGG 243
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 26.2 bits (55), Expect = 6.1
Identities = 12/40 (30%), Positives = 14/40 (35%)
Frame = +1
Query: 730 PPXPXXXPPXPPPPXXPPXPPPXPXPXXPXXPXPXSPRXP 849
PP P PP PP P P P +P+ P
Sbjct: 926 PPPPKVGETYHPPTASGTRVPPVQQPSHPNPYTPVAPQSP 965
>SPAC17G8.01c |trl1|SPAC6C3.10c|tRNA ligase Trl1
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 787
Score = 25.8 bits (54), Expect = 8.1
Identities = 10/28 (35%), Positives = 16/28 (57%)
Frame = +1
Query: 289 YKNKSEVPPFVSAEIIERSKSEARIKIS 372
+K+ EVP FV +++R IK+S
Sbjct: 477 FKHTPEVPEFVQNRVLQRGDRHQSIKVS 504
>SPBC887.19 |rft1||human RFT1 ortholog |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 527
Score = 25.8 bits (54), Expect = 8.1
Identities = 11/21 (52%), Positives = 14/21 (66%)
Frame = -1
Query: 295 SCIFLSTQESFSEILSVEIYE 233
+CIF+ T SF E+LS YE
Sbjct: 135 TCIFIYTVSSFIELLSEPYYE 155
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,562,751
Number of Sequences: 5004
Number of extensions: 47594
Number of successful extensions: 516
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 128
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 321
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 440481800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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