Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_K11
(768 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 34 0.097
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 34 0.097
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 33 0.22
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 33 0.22
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 33 0.22
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 32 0.52
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 32 0.52
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 31 1.2
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 31 1.2
AC006611-4|AAK85456.2| 328|Caenorhabditis elegans Hypothetical ... 31 1.2
AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical ... 30 1.6
Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical pr... 29 2.8
AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical ... 29 2.8
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 29 2.8
Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 29 3.6
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 29 3.6
U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor... 29 3.6
AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing... 29 3.6
AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing... 29 3.6
AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical ... 29 3.6
AF067609-10|AAC17537.1| 163|Caenorhabditis elegans Ground-like ... 29 4.8
AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical ... 29 4.8
AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical ... 29 4.8
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 28 6.4
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 28 6.4
U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astaci... 28 6.4
AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical ... 28 6.4
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 28 6.4
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 28 6.4
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 28 6.4
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 28 8.4
AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase assoc... 24 8.6
AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase assoc... 24 9.3
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 34.3 bits (75), Expect = 0.097
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +2
Query: 455 PPPPPXFFFXXXXXXXXPPPPPPG 526
PPPPP F PPPPPPG
Sbjct: 317 PPPPPPSRFGPPGMGGMPPPPPPG 340
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +2
Query: 443 GGXXPPPPPXFFFXXXXXXXXPPPPPP 523
GG PPPPP + PPPPPP
Sbjct: 331 GGMPPPPPPGMRY----PGGMPPPPPP 353
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/57 (29%), Positives = 19/57 (33%), Gaps = 1/57 (1%)
Frame = +2
Query: 356 GXKXPPPRXXKKKXFXXXXXXXKKXXXXGGGXXPPPPPXF-FFXXXXXXXXPPPPPP 523
G PPP + + G G PPPPP PPPPPP
Sbjct: 331 GGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPPP 387
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 34.3 bits (75), Expect = 0.097
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +2
Query: 455 PPPPPXFFFXXXXXXXXPPPPPPG 526
PPPPP F PPPPPPG
Sbjct: 327 PPPPPPSRFGPPGMGGMPPPPPPG 350
Score = 30.3 bits (65), Expect = 1.6
Identities = 13/27 (48%), Positives = 14/27 (51%)
Frame = +2
Query: 443 GGXXPPPPPXFFFXXXXXXXXPPPPPP 523
GG PPPPP + PPPPPP
Sbjct: 341 GGMPPPPPPGMRY----PGGMPPPPPP 363
Score = 28.7 bits (61), Expect = 4.8
Identities = 17/57 (29%), Positives = 19/57 (33%), Gaps = 1/57 (1%)
Frame = +2
Query: 356 GXKXPPPRXXKKKXFXXXXXXXKKXXXXGGGXXPPPPPXF-FFXXXXXXXXPPPPPP 523
G PPP + + G G PPPPP PPPPPP
Sbjct: 341 GGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAPPSGHGMIPPPPPP 397
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 33.1 bits (72), Expect = 0.22
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 446 GXXPPPPPXFFFXXXXXXXXPPPPPPG 526
G PPPPP PPPPPPG
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPG 766
Score = 31.9 bits (69), Expect = 0.52
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +2
Query: 443 GGXXPPPPPXFFFXXXXXXXXPPPPPPG 526
GG PPPPP PPPPPPG
Sbjct: 724 GGPPPPPPPGGL--PPITGGPPPPPPPG 749
Score = 31.1 bits (67), Expect = 0.90
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +2
Query: 443 GGXXPPPPPXFFFXXXXXXXXPPPPPPG 526
GG PPPPP PPPPPPG
Sbjct: 756 GGPPPPPPPP-----GGCPPPPPPPPPG 778
Score = 31.1 bits (67), Expect = 0.90
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +2
Query: 443 GGXXPPPPPXFFFXXXXXXXXPPPPPPG 526
GG PPPPP PPPPPPG
Sbjct: 766 GGCPPPPPPPP--PGGFKGGPPPPPPPG 791
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 446 GXXPPPPPXFFFXXXXXXXXPPPPPPG 526
G PPPPP PPPPP G
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGG 750
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 33.1 bits (72), Expect = 0.22
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 446 GXXPPPPPXFFFXXXXXXXXPPPPPPG 526
G PPPPP PPPPPPG
Sbjct: 740 GGPPPPPPPGGLPPISGGPPPPPPPPG 766
Score = 31.9 bits (69), Expect = 0.52
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +2
Query: 443 GGXXPPPPPXFFFXXXXXXXXPPPPPPG 526
GG PPPPP PPPPPPG
Sbjct: 724 GGPPPPPPPGGL--PPITGGPPPPPPPG 749
Score = 31.1 bits (67), Expect = 0.90
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +2
Query: 443 GGXXPPPPPXFFFXXXXXXXXPPPPPPG 526
GG PPPPP PPPPPPG
Sbjct: 756 GGPPPPPPPP-----GGCPPPPPPPPPG 778
Score = 31.1 bits (67), Expect = 0.90
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +2
Query: 443 GGXXPPPPPXFFFXXXXXXXXPPPPPPG 526
GG PPPPP PPPPPPG
Sbjct: 766 GGCPPPPPPPP--PGGFKGGPPPPPPPG 791
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 446 GXXPPPPPXFFFXXXXXXXXPPPPPPG 526
G PPPPP PPPPP G
Sbjct: 724 GGPPPPPPPGGLPPITGGPPPPPPPGG 750
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 33.1 bits (72), Expect = 0.22
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 446 GXXPPPPPXFFFXXXXXXXXPPPPPPG 526
G PPPPP PPPPPPG
Sbjct: 323 GGPPPPPPPGGLPPISGGPPPPPPPPG 349
Score = 31.9 bits (69), Expect = 0.52
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +2
Query: 443 GGXXPPPPPXFFFXXXXXXXXPPPPPPG 526
GG PPPPP PPPPPPG
Sbjct: 307 GGPPPPPPPGGL--PPITGGPPPPPPPG 332
Score = 31.1 bits (67), Expect = 0.90
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +2
Query: 443 GGXXPPPPPXFFFXXXXXXXXPPPPPPG 526
GG PPPPP PPPPPPG
Sbjct: 339 GGPPPPPPPP-----GGCPPPPPPPPPG 361
Score = 31.1 bits (67), Expect = 0.90
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = +2
Query: 443 GGXXPPPPPXFFFXXXXXXXXPPPPPPG 526
GG PPPPP PPPPPPG
Sbjct: 349 GGCPPPPPPPP--PGGFKGGPPPPPPPG 374
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/27 (44%), Positives = 12/27 (44%)
Frame = +2
Query: 446 GXXPPPPPXFFFXXXXXXXXPPPPPPG 526
G PPPPP PPPPP G
Sbjct: 307 GGPPPPPPPGGLPPITGGPPPPPPPGG 333
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 31.9 bits (69), Expect = 0.52
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 455 PPPPPXFFFXXXXXXXXPPPPPP 523
PPPPP F PPPPPP
Sbjct: 613 PPPPPQSFGMAPISSAAPPPPPP 635
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 455 PPPPPXFFFXXXXXXXXPPPPPP 523
PPPPP PPPPPP
Sbjct: 633 PPPPPPMGLPAVGAGAPPPPPPP 655
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 455 PPPPPXFFFXXXXXXXXPPPPPP 523
PPPP F PPPPPP
Sbjct: 614 PPPPQSFGMAPISSAAPPPPPPP 636
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 455 PPPPPXFFFXXXXXXXXPPPPPP 523
PPPPP F PPPPP
Sbjct: 612 PPPPPPQSFGMAPISSAAPPPPP 634
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 455 PPPPPXFFFXXXXXXXXPPPPPP 523
PPPPP PPPPPP
Sbjct: 634 PPPPPMGLPAVGAGAPPPPPPPP 656
Score = 25.8 bits (54), Expect(2) = 4.1
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 458 PPPPXFFFXXXXXXXXPPPPPP 523
PPPP PPPPPP
Sbjct: 558 PPPPTRVESHGLAPARPPPPPP 579
Score = 21.4 bits (43), Expect(2) = 4.1
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +2
Query: 506 PPPPPPGXXXF 538
PPPPPP F
Sbjct: 610 PPPPPPPPQSF 620
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 31.9 bits (69), Expect = 0.52
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +2
Query: 455 PPPPPXFFFXXXXXXXXPPPPPP 523
PPPPP F PPPPPP
Sbjct: 439 PPPPPQSFGMAPISSAAPPPPPP 461
Score = 30.3 bits (65), Expect = 1.6
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 455 PPPPPXFFFXXXXXXXXPPPPPP 523
PPPPP PPPPPP
Sbjct: 459 PPPPPPMGLPAVGAGAPPPPPPP 481
Score = 29.5 bits (63), Expect = 2.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 455 PPPPPXFFFXXXXXXXXPPPPPP 523
PPPP F PPPPPP
Sbjct: 440 PPPPQSFGMAPISSAAPPPPPPP 462
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 455 PPPPPXFFFXXXXXXXXPPPPPP 523
PPPPP F PPPPP
Sbjct: 438 PPPPPPQSFGMAPISSAAPPPPP 460
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 455 PPPPPXFFFXXXXXXXXPPPPPP 523
PPPPP PPPPPP
Sbjct: 460 PPPPPMGLPAVGAGAPPPPPPPP 482
Score = 25.8 bits (54), Expect(2) = 4.2
Identities = 10/22 (45%), Positives = 10/22 (45%)
Frame = +2
Query: 458 PPPPXFFFXXXXXXXXPPPPPP 523
PPPP PPPPPP
Sbjct: 384 PPPPTRVESHGLAPARPPPPPP 405
Score = 21.4 bits (43), Expect(2) = 4.2
Identities = 7/11 (63%), Positives = 7/11 (63%)
Frame = +2
Query: 506 PPPPPPGXXXF 538
PPPPPP F
Sbjct: 436 PPPPPPPPQSF 446
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 455 PPPPPXFFFXXXXXXXXPPPPPPG 526
PPPPP PPPPPPG
Sbjct: 794 PPPPPPLPPISSGAPPPPPPPPPG 817
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 30.7 bits (66), Expect = 1.2
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +2
Query: 455 PPPPPXFFFXXXXXXXXPPPPPPG 526
PPPPP PPPPPPG
Sbjct: 794 PPPPPPLPPISSGAPPPPPPPPPG 817
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 455 PPPPPXFFFXXXXXXXXPPPPPP 523
PPPPP PPPPPP
Sbjct: 70 PPPPPPLISILQQAPPPPPPPPP 92
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 455 PPPPPXFFFXXXXXXXXPPPPPP 523
PPPPP PPPPPP
Sbjct: 71 PPPPPLISILQQAPPPPPPPPPP 93
Score = 29.9 bits (64), Expect = 2.1
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 455 PPPPPXFFFXXXXXXXXPPPPPP 523
PPPPP PPPPPP
Sbjct: 69 PPPPPPPLISILQQAPPPPPPPP 91
>AC006611-4|AAK85456.2| 328|Caenorhabditis elegans Hypothetical
protein C30F8.3 protein.
Length = 328
Score = 30.7 bits (66), Expect = 1.2
Identities = 11/22 (50%), Positives = 12/22 (54%)
Frame = +2
Query: 458 PPPPXFFFXXXXXXXXPPPPPP 523
PPPP + F PPPPPP
Sbjct: 58 PPPPAYPFAPQVFTQPPPPPPP 79
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 455 PPPPPXFFFXXXXXXXXPPPPPP 523
PPPP F PPPPPP
Sbjct: 58 PPPPAYPFAPQVFTQPPPPPPPP 80
>AF067219-3|AAC17027.1| 74|Caenorhabditis elegans Hypothetical
protein R12E2.6 protein.
Length = 74
Score = 30.3 bits (65), Expect = 1.6
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = +2
Query: 440 GGGXXPPPPPXFFFXXXXXXXXPPPPPPG 526
GGG PPPPP PPPPP G
Sbjct: 44 GGGFGPPPPP----FGPVGYALPPPPPNG 68
>Z92826-4|CAB07322.1| 309|Caenorhabditis elegans Hypothetical
protein C18D11.4 protein.
Length = 309
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/26 (46%), Positives = 13/26 (50%)
Frame = -1
Query: 522 GGGGGGXXXXXXXKKKKXGGGGGXXP 445
GGGGGG + GGGGG P
Sbjct: 257 GGGGGGPDRRDHRDNDRNGGGGGHRP 282
>AL110490-3|CAB54449.1| 892|Caenorhabditis elegans Hypothetical
protein Y48B6A.3 protein.
Length = 892
Score = 29.5 bits (63), Expect = 2.8
Identities = 12/28 (42%), Positives = 15/28 (53%)
Frame = -1
Query: 522 GGGGGGXXXXXXXKKKKXGGGGGXXPPP 439
GGGGGG + ++ GG GG PP
Sbjct: 843 GGGGGGSYHQPYNQDQRRGGRGGGGGPP 870
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -1
Query: 522 GGGGGGXXXXXXXKKKKXGGGGG 454
GGGGGG ++ GGGGG
Sbjct: 769 GGGGGGGYRGNSYDDRRGGGGGG 791
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/23 (47%), Positives = 13/23 (56%)
Frame = -1
Query: 522 GGGGGGXXXXXXXKKKKXGGGGG 454
GGGGGG ++ GGGGG
Sbjct: 770 GGGGGGYRGNSYDDRRGGGGGGG 792
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.5 bits (63), Expect = 2.8
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = +2
Query: 446 GXXPPPPPXFFFXXXXXXXXPPPPPPG 526
G PPPPP PPPPPPG
Sbjct: 574 GAPPPPPPP---PPMLGGPPPPPPPPG 597
>Z78013-1|CAB01425.3| 1140|Caenorhabditis elegans Hypothetical
protein F15B9.4 protein.
Length = 1140
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/30 (43%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Frame = +2
Query: 440 GGGXXPPPPPXFFFXXXXXXXXPPPPP-PG 526
G PPPPP PPPPP PG
Sbjct: 498 GHAPNPPPPPPLLGIAPMSTNAPPPPPMPG 527
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -1
Query: 519 GGGGGXXXXXXXKKKKXGGGGGXXPPP 439
GGGGG GGGGG PPP
Sbjct: 26 GGGGGGGGCGGGCGGGCGGGGGCAPPP 52
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 29.1 bits (62), Expect = 3.6
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -1
Query: 519 GGGGGXXXXXXXKKKKXGGGGGXXPPP 439
GGGGG GGGGG PPP
Sbjct: 26 GGGGGGGGCGGGCGGGCGGGGGCAPPP 52
>U79157-1|AAC26982.1| 496|Caenorhabditis elegans splicing factor
U2AF65 protein.
Length = 496
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 522 GGGGGGXXXXXXXKKKKXGGGGGXXP 445
GGGGGG ++++ GGGG P
Sbjct: 85 GGGGGGDRDRSRSRERRRGGGGRDEP 110
>AC024875-3|AAK29989.1| 496|Caenorhabditis elegans U2af splicing
factor protein 1,isoform a protein.
Length = 496
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 522 GGGGGGXXXXXXXKKKKXGGGGGXXP 445
GGGGGG ++++ GGGG P
Sbjct: 85 GGGGGGDRDRSRSRERRRGGGGRDEP 110
>AC024875-1|AAL00879.1| 474|Caenorhabditis elegans U2af splicing
factor protein 1,isoform c protein.
Length = 474
Score = 29.1 bits (62), Expect = 3.6
Identities = 11/26 (42%), Positives = 15/26 (57%)
Frame = -1
Query: 522 GGGGGGXXXXXXXKKKKXGGGGGXXP 445
GGGGGG ++++ GGGG P
Sbjct: 63 GGGGGGDRDRSRSRERRRGGGGRDEP 88
>AC024809-7|AAF59540.1| 315|Caenorhabditis elegans Hypothetical
protein Y53G8AR.9 protein.
Length = 315
Score = 29.1 bits (62), Expect = 3.6
Identities = 14/29 (48%), Positives = 14/29 (48%)
Frame = -1
Query: 525 PGGGGGGXXXXXXXKKKKXGGGGGXXPPP 439
PGGGGGG GGG G PPP
Sbjct: 188 PGGGGGGMGGGGG--SGGSGGGSGRFPPP 214
>AF067609-10|AAC17537.1| 163|Caenorhabditis elegans Ground-like
(grd related) protein20 protein.
Length = 163
Score = 28.7 bits (61), Expect = 4.8
Identities = 13/27 (48%), Positives = 13/27 (48%)
Frame = -1
Query: 525 PGGGGGGXXXXXXXKKKKXGGGGGXXP 445
PGGGGGG GGGGG P
Sbjct: 20 PGGGGGGGCGGGCGGGCGGGGGGGCLP 46
>AF025467-2|AAN65301.1| 505|Caenorhabditis elegans Hypothetical
protein R148.5b protein.
Length = 505
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 446 GXXPPPPPXFFFXXXXXXXXPPPP 517
G PPPPP F PPPP
Sbjct: 302 GHFPPPPPHFMGRGMPPPFMPPPP 325
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 446 GXXPPPPPXFFFXXXXXXXXPPPPP 520
G PPP P F PPPPP
Sbjct: 334 GFMPPPHPMMFRGGPYPPFFPPPPP 358
>AF025467-1|AAB71039.2| 528|Caenorhabditis elegans Hypothetical
protein R148.5a protein.
Length = 528
Score = 28.7 bits (61), Expect = 4.8
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 446 GXXPPPPPXFFFXXXXXXXXPPPP 517
G PPPPP F PPPP
Sbjct: 302 GHFPPPPPHFMGRGMPPPFMPPPP 325
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/25 (44%), Positives = 11/25 (44%)
Frame = +2
Query: 446 GXXPPPPPXFFFXXXXXXXXPPPPP 520
G PPP P F PPPPP
Sbjct: 334 GFMPPPHPMMFRGGPYPPFFPPPPP 358
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 455 PPPPPXFFFXXXXXXXXPPPPPP 523
PPPPP PPPPPP
Sbjct: 489 PPPPPPLPPIATPSSVPPPPPPP 511
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 455 PPPPPXFFFXXXXXXXXPPPPPP 523
PPPPP PPPPPP
Sbjct: 490 PPPPPLPPIATPSSVPPPPPPPP 512
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 28.3 bits (60), Expect = 6.4
Identities = 13/26 (50%), Positives = 13/26 (50%)
Frame = +2
Query: 446 GXXPPPPPXFFFXXXXXXXXPPPPPP 523
G PPPPP F PPPPPP
Sbjct: 102 GGIPPPPPMF-------GAPPPPPPP 120
>U39666-1|AAA80412.2| 644|Caenorhabditis elegans Nematode astacin
protease protein33 protein.
Length = 644
Score = 28.3 bits (60), Expect = 6.4
Identities = 10/20 (50%), Positives = 11/20 (55%)
Frame = +2
Query: 458 PPPPXFFFXXXXXXXXPPPP 517
PPPP +FF PPPP
Sbjct: 24 PPPPDWFFPGPLRPWGPPPP 43
>AF043706-2|AAB97604.2| 730|Caenorhabditis elegans Hypothetical
protein ZC123.1 protein.
Length = 730
Score = 28.3 bits (60), Expect = 6.4
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 440 GGGXXPPPPPXFFFXXXXXXXXPPPPPP 523
GG PP PP PPPPPP
Sbjct: 120 GGVPAPPNPPRTCCPPPTPAAPPPPPPP 147
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 455 PPPPPXFFFXXXXXXXXPPPPPP 523
PPPPP PPPPPP
Sbjct: 280 PPPPPAGGSPPPPRAGSPPPPPP 302
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 455 PPPPPXFFFXXXXXXXXPPPPPP 523
PPPPP PPPPPP
Sbjct: 301 PPPPPAGGSPPPPRAGSPPPPPP 323
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 28.3 bits (60), Expect = 6.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 455 PPPPPXFFFXXXXXXXXPPPPPP 523
PPPPP PPPPPP
Sbjct: 286 PPPPPAGGSPPPPRAGSPPPPPP 308
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 27.9 bits (59), Expect = 8.4
Identities = 11/23 (47%), Positives = 11/23 (47%)
Frame = +2
Query: 455 PPPPPXFFFXXXXXXXXPPPPPP 523
PPPP F PPPPPP
Sbjct: 56 PPPPCPAQFCPPPPICPPPPPPP 78
>AC006638-2|AAK85481.1| 1256|Caenorhabditis elegans Cyclase associated
protein homologprotein 1, isoform a protein.
Length = 1256
Score = 23.8 bits (49), Expect(2) = 8.6
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 506 PPPPPPGXXXFF 541
PPPPPP FF
Sbjct: 1013 PPPPPPPPADFF 1024
Score = 22.2 bits (45), Expect(2) = 8.6
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 443 GGXXPPPPP 469
GG PPPPP
Sbjct: 1010 GGPPPPPPP 1018
>AC006638-1|AAK85482.1| 495|Caenorhabditis elegans Cyclase
associated protein homologprotein 1, isoform b protein.
Length = 495
Score = 23.8 bits (49), Expect(2) = 9.3
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 506 PPPPPPGXXXFF 541
PPPPPP FF
Sbjct: 252 PPPPPPPPADFF 263
Score = 22.2 bits (45), Expect(2) = 9.3
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 443 GGXXPPPPP 469
GG PPPPP
Sbjct: 249 GGPPPPPPP 257
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,194,869
Number of Sequences: 27780
Number of extensions: 240965
Number of successful extensions: 1703
Number of sequences better than 10.0: 35
Number of HSP's better than 10.0 without gapping: 517
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1263
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1840614650
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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