Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_K10
(891 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_04_0017 + 18937774-18937864,18938505-18940945 122 5e-28
04_01_0103 + 1082077-1082167,1083037-1085477 121 7e-28
01_06_0662 + 30987187-30987277,30987825-30990214 117 1e-26
01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912 113 2e-25
05_05_0156 + 22792783-22793410,22797153-22797227,22797644-227988... 53 4e-07
02_02_0474 + 10738476-10738797,10739568-10739677,10739891-107400... 43 4e-04
02_01_0432 - 3144560-3144655,3144792-3144832,3145019-3145094,314... 43 4e-04
01_06_0734 + 31569017-31569358,31569832-31569906,31570009-315701... 41 0.002
06_01_0325 - 2366193-2366367,2367063-2367122,2367323-2367463,236... 40 0.003
03_05_0511 + 25056018-25059107 39 0.005
06_03_0715 - 23823427-23823525,23823616-23823822,23823907-238240... 38 0.008
02_04_0148 - 20198407-20201424 37 0.019
02_04_0462 + 23131433-23132836 34 0.17
03_05_0044 + 20203644-20204054,20204695-20204916,20205092-202051... 33 0.40
03_01_0548 + 4099386-4099847,4100435-4101316 31 0.93
03_01_0547 + 4093196-4093657,4094267-4095148 31 0.93
03_01_0544 + 4082528-4082989,4083585-4084466 31 0.93
03_01_0543 + 4076981-4077442,4078145-4079026 31 0.93
04_04_0633 - 26771487-26771591,26771708-26771782,26771906-267719... 30 2.1
03_06_0699 - 35612919-35612989,35613079-35613319,35613506-356135... 30 2.1
11_01_0724 + 5981680-5981748,5982301-5982397,5982496-5982593,598... 29 3.8
05_05_0230 - 23476919-23477372,23477656-23477695,23478578-234787... 29 3.8
09_04_0730 + 19783346-19783372,19783548-19783638,19783973-197840... 29 5.0
05_05_0305 - 23970692-23970825,23972323-23973703 29 5.0
07_03_0911 + 22537352-22537456,22537877-22538028,22538277-225383... 28 8.7
04_04_1015 - 30115377-30115477,30115570-30115615,30116491-301165... 28 8.7
04_04_1008 - 30054674-30054774,30054867-30054912,30055788-300558... 28 8.7
>02_04_0017 + 18937774-18937864,18938505-18940945
Length = 843
Score = 122 bits (293), Expect = 5e-28
Identities = 81/205 (39%), Positives = 110/205 (53%), Gaps = 2/205 (0%)
Frame = +2
Query: 278 ETRFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITXPXQREKSEKGFLINLIDSPGT 457
+ R TDTR DE +R ITIKST IS+F+E+ ++ L +R+ +E +LINLIDSPG
Sbjct: 53 DVRMTDTRADEAERGITIKSTGISLFYEMSDESLKLYKG--ERDGNE--YLINLIDSPGH 108
Query: 458 R*FLF*SKQLHSV--VTDGAPGGC*LCVWVCVYQTETVLRXAIXXRIKPILFMNKWTVLF 631
F S ++ + +TDGA VCV QTETVLR A+ RI+P+L +NK F
Sbjct: 109 VDF---SSEVTAALRITDGALVVVDCIEGVCV-QTETVLRQALGERIRPVLTVNKMDRCF 164
Query: 632 LSXNLKAEELYQTFQRIVEXVXVXIATYNDDGGPWVRCVSTPXXXXXXXXXXXXXXXLFP 811
L ++ EE YQTF R++E V +ATY D + V F
Sbjct: 165 LELQVEGEEAYQTFSRVIENANVIMATYED---TLLGDVQVYPEKGTVAFSAGLHGWAFT 221
Query: 812 LKQFSEMYADXFXIDLVQPMNXLWG 886
L F++MYA F +D + M LWG
Sbjct: 222 LSSFAKMYASKFGVDEFKMMERLWG 246
Score = 60.9 bits (141), Expect = 1e-09
Identities = 28/32 (87%), Positives = 30/32 (93%)
Frame = +1
Query: 148 RGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVS 243
R +MDKK NIRNMSVIAHVDHGKSTLTDSLV+
Sbjct: 10 RRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVA 41
>04_01_0103 + 1082077-1082167,1083037-1085477
Length = 843
Score = 121 bits (292), Expect = 7e-28
Identities = 81/205 (39%), Positives = 110/205 (53%), Gaps = 2/205 (0%)
Frame = +2
Query: 278 ETRFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITXPXQREKSEKGFLINLIDSPGT 457
+ R TDTR DE +R ITIKST IS+F+E+ ++ L +R+ +E +LINLIDSPG
Sbjct: 53 DVRMTDTRADEAERGITIKSTGISLFYEMSDESLKLYKG--ERDGNE--YLINLIDSPGH 108
Query: 458 R*FLF*SKQLHSV--VTDGAPGGC*LCVWVCVYQTETVLRXAIXXRIKPILFMNKWTVLF 631
F S ++ + +TDGA VCV QTETVLR A+ RI+P+L +NK F
Sbjct: 109 VDF---SSEVTAALRITDGALVVVDCIEGVCV-QTETVLRQALGERIRPVLTVNKMDRCF 164
Query: 632 LSXNLKAEELYQTFQRIVEXVXVXIATYNDDGGPWVRCVSTPXXXXXXXXXXXXXXXLFP 811
L ++ EE YQTF R++E V +ATY D + V F
Sbjct: 165 LELQVEGEEAYQTFSRVIENANVIMATYED---TLLGDVQVYPEKGTVAFSAGLHGWAFT 221
Query: 812 LKQFSEMYADXFXIDLVQPMNXLWG 886
L F++MYA F +D + M LWG
Sbjct: 222 LSSFAKMYASKFGVDESKMMERLWG 246
Score = 60.9 bits (141), Expect = 1e-09
Identities = 28/32 (87%), Positives = 30/32 (93%)
Frame = +1
Query: 148 RGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVS 243
R +MDKK NIRNMSVIAHVDHGKSTLTDSLV+
Sbjct: 10 RRIMDKKNNIRNMSVIAHVDHGKSTLTDSLVA 41
>01_06_0662 + 30987187-30987277,30987825-30990214
Length = 826
Score = 117 bits (282), Expect = 1e-26
Identities = 79/205 (38%), Positives = 109/205 (53%), Gaps = 2/205 (0%)
Frame = +2
Query: 278 ETRFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITXPXQREKSEKGFLINLIDSPGT 457
+ R TD+R DE +R ITIKST IS+++E+ ++ L + R+ +E +LINLIDSPG
Sbjct: 53 DVRMTDSRSDEAERGITIKSTGISLYYEMSDESLK--SYKGDRDGNE--YLINLIDSPGH 108
Query: 458 R*FLF*SKQLHSV--VTDGAPGGC*LCVWVCVYQTETVLRXAIXXRIKPILFMNKWTVLF 631
F S ++ + +TDGA VCV QTETVLR A+ RI+P+L +NK F
Sbjct: 109 VDF---SSEVTAALRITDGALVVVDCIEGVCV-QTETVLRQALGERIRPVLTVNKMDRCF 164
Query: 632 LSXNLKAEELYQTFQRIVEXVXVXIATYNDDGGPWVRCVSTPXXXXXXXXXXXXXXXLFP 811
L + EE YQTF R++E V +ATY D + V F
Sbjct: 165 LELQVGGEEAYQTFSRVIENANVIMATYED---ALLGDVQVYPEKGTVAFSAGLHGWAFT 221
Query: 812 LKQFSEMYADXFXIDLVQPMNXLWG 886
L F++MYA F +D + M LWG
Sbjct: 222 LSNFAKMYASKFGVDESKMMERLWG 246
Score = 60.5 bits (140), Expect = 2e-09
Identities = 27/32 (84%), Positives = 30/32 (93%)
Frame = +1
Query: 148 RGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVS 243
R +MDKK NIRNMSV+AHVDHGKSTLTDSLV+
Sbjct: 10 RRIMDKKHNIRNMSVVAHVDHGKSTLTDSLVA 41
>01_06_0548 - 30137139-30139196,30139279-30139691,30139822-30139912
Length = 853
Score = 113 bits (272), Expect = 2e-25
Identities = 77/205 (37%), Positives = 104/205 (50%), Gaps = 2/205 (0%)
Frame = +2
Query: 278 ETRFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITXPXQREKSEKGFLINLIDSPGT 457
+ R TDTR DE +R ITIKST IS+++E+ + L + ++ +LINLIDSPG
Sbjct: 53 DVRMTDTRADEAERGITIKSTGISLYYEMTDAAL----RSFEGKRDGNSYLINLIDSPGH 108
Query: 458 R*FLF*SKQLHSV--VTDGAPGGC*LCVWVCVYQTETVLRXAIXXRIKPILFMNKWTVLF 631
F S ++ + +TDGA VCV QTETVLR ++ RIKP+L +NK F
Sbjct: 109 IDF---SSEVTAALRITDGALVVVDCIEGVCV-QTETVLRQSLAERIKPVLTVNKMDRCF 164
Query: 632 LSXNLKAEELYQTFQRIVEXVXVXIATYNDDGGPWVRCVSTPXXXXXXXXXXXXXXXLFP 811
L EE YQ F R++E V V +A Y D C+ P F
Sbjct: 165 LELQQSGEEAYQAFSRVIESVNVTMAPYEDKN--LGDCMVAP-EKGTVAFSAGLHGWAFT 221
Query: 812 LKQFSEMYADXFXIDLVQPMNXLWG 886
L F++MY F +D + M LWG
Sbjct: 222 LSNFAKMYKAKFKVDEAKMMERLWG 246
Score = 60.1 bits (139), Expect = 2e-09
Identities = 28/32 (87%), Positives = 29/32 (90%)
Frame = +1
Query: 148 RGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVS 243
R MDKK NIRNMSVIAHVDHGKSTLTDSLV+
Sbjct: 10 RASMDKKDNIRNMSVIAHVDHGKSTLTDSLVA 41
>05_05_0156 +
22792783-22793410,22797153-22797227,22797644-22798879,
22798947-22799155,22799240-22800209,22800395-22800465
Length = 1062
Score = 52.8 bits (121), Expect = 4e-07
Identities = 45/188 (23%), Positives = 84/188 (44%)
Frame = +2
Query: 323 ITIKSTAISMFFELEEKDLVFITXPXQREKSEKGFLINLIDSPGTR*FLF*SKQLHSVVT 502
+T ++ IS+++E+ E L + +++ G LINLIDSP L Q +
Sbjct: 254 VTESNSLISLYYEMPEDSL----RSYKDKRAGNGHLINLIDSPVCC-NLSNDVQPALCIM 308
Query: 503 DGAPGGC*LCVWVCVYQTETVLRXAIXXRIKPILFMNKWTVLFLSXNLKAEELYQTFQRI 682
DGA V ++ T+T +R A+ +I+P+ +NK FL N+ E+ YQT +
Sbjct: 309 DGALVVVDSFEGVTLW-TKTSIREALNMKIQPVFTLNKIDRFFLEQNVDGEKAYQTLSSL 367
Query: 683 VEXVXVXIATYNDDGGPWVRCVSTPXXXXXXXXXXXXXXXLFPLKQFSEMYADXFXIDLV 862
++ V ++++ D + F++MY+ F ++
Sbjct: 368 IDSVNATMSSHKD--------AQVYPTKGTVVFSSGLHGWAVAISNFAKMYSSKFKVEES 419
Query: 863 QPMNXLWG 886
+ ++ LWG
Sbjct: 420 KMIDRLWG 427
Score = 35.5 bits (78), Expect = 0.057
Identities = 16/30 (53%), Positives = 21/30 (70%)
Frame = +1
Query: 154 MMDKKRNIRNMSVIAHVDHGKSTLTDSLVS 243
+M K NIRN+ VIA HGK+ + DSLV+
Sbjct: 216 IMCNKNNIRNVLVIADAGHGKTAILDSLVA 245
>02_02_0474 +
10738476-10738797,10739568-10739677,10739891-10740094,
10740400-10740576,10740659-10740811,10741535-10741624,
10741939-10742049,10742169-10742285,10742881-10743032,
10743116-10743200,10743597-10743691,10744211-10744376,
10744459-10744654,10745662-10745795
Length = 703
Score = 42.7 bits (96), Expect = 4e-04
Identities = 14/29 (48%), Positives = 26/29 (89%)
Frame = +1
Query: 166 KRNIRNMSVIAHVDHGKSTLTDSLVSKGR 252
+R++RN++++AHVDHGK+TL DS++ + +
Sbjct: 116 RRDVRNIAIVAHVDHGKTTLVDSMLRQAK 144
>02_01_0432 -
3144560-3144655,3144792-3144832,3145019-3145094,
3145465-3145542,3146121-3146208,3146613-3146686,
3147445-3147579,3147699-3147770,3148239-3148325,
3148418-3148522,3149028-3149085,3149576-3149634,
3149960-3150056,3150217-3150317,3150443-3150487,
3150619-3150681,3151082-3151147,3151286-3151342,
3151570-3151656,3152063-3152239,3152413-3152625
Length = 624
Score = 42.7 bits (96), Expect = 4e-04
Identities = 17/23 (73%), Positives = 20/23 (86%)
Frame = +1
Query: 172 NIRNMSVIAHVDHGKSTLTDSLV 240
NIRN S+IAH+DHGKSTL D L+
Sbjct: 76 NIRNFSIIAHIDHGKSTLADKLL 98
>01_06_0734 +
31569017-31569358,31569832-31569906,31570009-31570159,
31570716-31570784,31570864-31571036,31571474-31571611,
31571747-31571872,31571951-31572049,31573175-31573298,
31573465-31573528,31573798-31573852,31573951-31574075,
31574228-31574301,31574436-31574485,31574722-31574808,
31574897-31574947,31575025-31575108,31575400-31575498
Length = 661
Score = 40.7 bits (91), Expect = 0.002
Identities = 19/30 (63%), Positives = 24/30 (80%)
Frame = +1
Query: 151 GMMDKKRNIRNMSVIAHVDHGKSTLTDSLV 240
G +D R IRN++VIAHVDHGK+TL D L+
Sbjct: 57 GALDPSR-IRNVAVIAHVDHGKTTLMDRLL 85
>06_01_0325 -
2366193-2366367,2367063-2367122,2367323-2367463,
2368175-2368288,2368444-2368475,2368736-2368793,
2369263-2369434,2369584-2370334,2370743-2371036
Length = 598
Score = 39.9 bits (89), Expect = 0.003
Identities = 16/22 (72%), Positives = 19/22 (86%)
Frame = +1
Query: 175 IRNMSVIAHVDHGKSTLTDSLV 240
+RN S+IAHVDHGKSTL D L+
Sbjct: 57 VRNFSIIAHVDHGKSTLADRLL 78
Score = 33.5 bits (73), Expect = 0.23
Identities = 17/59 (28%), Positives = 31/59 (52%)
Frame = +2
Query: 278 ETRFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITXPXQREKSEKGFLINLIDSPG 454
+ ++ D + E++R IT+K+ +MF+ L P + +L+NLID+PG
Sbjct: 90 QPQYLDKLQVERERGITVKAQTATMFYRHANNQL-----PASDQPDAPSYLLNLIDTPG 143
>03_05_0511 + 25056018-25059107
Length = 1029
Score = 39.1 bits (87), Expect = 0.005
Identities = 15/25 (60%), Positives = 20/25 (80%)
Frame = +1
Query: 169 RNIRNMSVIAHVDHGKSTLTDSLVS 243
R +RN ++AHVDHGK+TL D LV+
Sbjct: 8 RRVRNTCILAHVDHGKTTLADHLVA 32
Score = 33.5 bits (73), Expect = 0.23
Identities = 29/91 (31%), Positives = 39/91 (42%)
Frame = +2
Query: 422 GFLINLIDSPGTR*FLF*SKQLHSVVTDGAPGGC*LCVWVCVYQTETVLRXAIXXRIKPI 601
G +NLIDSPG F + ++D A V + QT LR A R++P
Sbjct: 74 GHRVNLIDSPGHIDFCS-EVSSAARLSDSALILVDAVEGVHI-QTHAALRQAFLERLRPC 131
Query: 602 LFMNKWTVLFLSXNLKAEELYQTFQRIVEXV 694
L +NK L +L E Y RI+ V
Sbjct: 132 LVLNKLDRLISELHLTPAEAYTRLHRIISDV 162
>06_03_0715 -
23823427-23823525,23823616-23823822,23823907-23824017,
23824124-23824322,23824410-23824495,23824940-23825098,
23825204-23825302,23825385-23826578,23826666-23826734,
23828042-23828812
Length = 997
Score = 38.3 bits (85), Expect = 0.008
Identities = 39/145 (26%), Positives = 65/145 (44%), Gaps = 2/145 (1%)
Frame = +2
Query: 284 RFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITXPXQREKSEKGFLINLIDSPGTR* 463
RFTDTR DEQ+R ++IK+ +S+ E + K +L N++D+PG
Sbjct: 187 RFTDTRVDEQERRVSIKAVPMSLVLE---------------GGNGKSYLCNIMDTPGHVN 231
Query: 464 FLF*SKQLHSV--VTDGAPGGC*LCVWVCVYQTETVLRXAIXXRIKPILFMNKWTVLFLS 637
F S ++ + + DGA V V TE +R A R+ ++ +NK L
Sbjct: 232 F---SDEMTAALRIADGAVLVVDAAEGVMV-NTERAIRHATQERLPIVVVINKVDRLITE 287
Query: 638 XNLKAEELYQTFQRIVEXVXVXIAT 712
L + Y + +E + I++
Sbjct: 288 LKLPPNDAYFKLRHTLEAINDLISS 312
Score = 29.1 bits (62), Expect = 5.0
Identities = 9/24 (37%), Positives = 17/24 (70%)
Frame = +1
Query: 175 IRNMSVIAHVDHGKSTLTDSLVSK 246
+RN++++ H+ HGK+ D LV +
Sbjct: 148 VRNVALVGHLQHGKTVFMDMLVEQ 171
>02_04_0148 - 20198407-20201424
Length = 1005
Score = 37.1 bits (82), Expect = 0.019
Identities = 13/25 (52%), Positives = 20/25 (80%)
Frame = +1
Query: 169 RNIRNMSVIAHVDHGKSTLTDSLVS 243
R +RN ++AHVDHGK++L D L++
Sbjct: 14 RRVRNTCILAHVDHGKTSLADHLIA 38
Score = 31.5 bits (68), Expect = 0.93
Identities = 39/137 (28%), Positives = 56/137 (40%)
Frame = +2
Query: 284 RFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITXPXQREKSEKGFLINLIDSPGTR* 463
R D ++EQ R IT+KS +I++ + + G ++LIDSPG
Sbjct: 55 RVMDHLEEEQRRAITMKSASIAL---------------RRGGEDGGGHRVHLIDSPGHID 99
Query: 464 FLF*SKQLHSVVTDGAPGGC*LCVWVCVYQTETVLRXAIXXRIKPILFMNKWTVLFLSXN 643
F + + D A V V QT LR A R++P L +NK L
Sbjct: 100 FCS-EVSAAARLADSALVLVDAAEGVRV-QTHAALRQAFVERLRPCLVLNKVDRLVAELR 157
Query: 644 LKAEELYQTFQRIVEXV 694
L E + +RIV V
Sbjct: 158 LTPAEAHARLRRIVSEV 174
>02_04_0462 + 23131433-23132836
Length = 467
Score = 33.9 bits (74), Expect = 0.17
Identities = 14/31 (45%), Positives = 21/31 (67%)
Frame = +1
Query: 145 SRGMMDKKRNIRNMSVIAHVDHGKSTLTDSL 237
+RG ++ + N+ I HVDHGK+TLT +L
Sbjct: 60 ARGKFERTKPHVNIGTIGHVDHGKTTLTAAL 90
>03_05_0044 +
20203644-20204054,20204695-20204916,20205092-20205130,
20206275-20206396,20206489-20206639,20207892-20207963,
20208256-20208351,20208861-20208949,20209068-20209134,
20210197-20210235,20210369-20210429,20210572-20210681,
20210766-20210840,20210914-20210982,20213126-20213247,
20214682-20214807,20214897-20215017,20215133-20215233,
20215564-20215624,20216560-20216613,20217585-20217689
Length = 770
Score = 32.7 bits (71), Expect = 0.40
Identities = 19/40 (47%), Positives = 24/40 (60%), Gaps = 1/40 (2%)
Frame = +1
Query: 142 RSRGMMDKKRNIRNMSVIAHVDHGKSTLTDS-LVSKGRYH 258
R R MD+ RNI + AH+D GK+TLT+ L GR H
Sbjct: 60 RWRESMDRMRNI---GISAHIDSGKTTLTERVLYYTGRIH 96
>03_01_0548 + 4099386-4099847,4100435-4101316
Length = 447
Score = 31.5 bits (68), Expect = 0.93
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +1
Query: 157 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 246
M K++ N+ VI HVD GKST T L+ K
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYK 30
>03_01_0547 + 4093196-4093657,4094267-4095148
Length = 447
Score = 31.5 bits (68), Expect = 0.93
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +1
Query: 157 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 246
M K++ N+ VI HVD GKST T L+ K
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYK 30
>03_01_0544 + 4082528-4082989,4083585-4084466
Length = 447
Score = 31.5 bits (68), Expect = 0.93
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +1
Query: 157 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 246
M K++ N+ VI HVD GKST T L+ K
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYK 30
>03_01_0543 + 4076981-4077442,4078145-4079026
Length = 447
Score = 31.5 bits (68), Expect = 0.93
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +1
Query: 157 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 246
M K++ N+ VI HVD GKST T L+ K
Sbjct: 1 MGKEKTHINIVVIGHVDSGKSTTTGHLIYK 30
>04_04_0633 -
26771487-26771591,26771708-26771782,26771906-26771981,
26772096-26772144,26772848-26773037,26773119-26773292,
26773415-26773543
Length = 265
Score = 30.3 bits (65), Expect = 2.1
Identities = 18/63 (28%), Positives = 29/63 (46%)
Frame = -1
Query: 540 TQTHSQQPPGAPSVTTECSCLLQKRNQRVPGESIKLIKKPFSLFSRXSGFVMNTKSFSSS 361
TQ QQP APS ++ QRVP + IK + + + ++FS++
Sbjct: 149 TQREPQQPKNAPSANRT-----SEKRQRVPSAYNRFIKDEIQRIKASNPDITHREAFSAA 203
Query: 360 SKN 352
+KN
Sbjct: 204 AKN 206
>03_06_0699 -
35612919-35612989,35613079-35613319,35613506-35613568,
35613644-35613709,35614110-35614193,35614685-35614890,
35614977-35615067,35615176-35615280,35615552-35615626,
35615728-35615820,35615914-35615989,35616115-35616305
Length = 453
Score = 30.3 bits (65), Expect = 2.1
Identities = 13/32 (40%), Positives = 19/32 (59%)
Frame = +1
Query: 142 RSRGMMDKKRNIRNMSVIAHVDHGKSTLTDSL 237
RS + + N+ I HVDHGK+TLT ++
Sbjct: 56 RSMATFTRTKPHVNVGTIGHVDHGKTTLTAAI 87
>11_01_0724 +
5981680-5981748,5982301-5982397,5982496-5982593,
5983535-5983690,5983986-5984063,5984135-5984266,
5984856-5984936,5985442-5985510,5985597-5985686,
5986001-5986145,5986218-5986276,5986384-5986479,
5986561-5986628,5986704-5986803,5986910-5986966,
5987179-5987337
Length = 517
Score = 29.5 bits (63), Expect = 3.8
Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 1/73 (1%)
Frame = -1
Query: 339 VDLMVMQRSCSSLRVSVKRVSPALAPAMIPALGNQ-RVREG*LAVIDVGDHRHVADIPLL 163
+D Q + ++LR + + V+ L P M+ LG + +V I++ HV P L
Sbjct: 64 MDASYHQETLNNLRKAAQNVNK-LCPVMLDTLGPEIQVHNSTGGPIELKAGNHVTITPDL 122
Query: 162 VHHPTGSRLPVKF 124
P+ LP+KF
Sbjct: 123 SKAPSSEILPIKF 135
>05_05_0230 -
23476919-23477372,23477656-23477695,23478578-23478700,
23479114-23479151,23479289-23479674,23479875-23481053,
23481805-23481928,23482733-23482779
Length = 796
Score = 29.5 bits (63), Expect = 3.8
Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 4/62 (6%)
Frame = +3
Query: 198 PRRSRQVNPHGLVGF--QGPVSLLVREPERPVSLTRVRTNKT--VASPLNLRPSLCSSSL 365
PR V P + F + P +L + PERP+S R R V S N PS S+ +
Sbjct: 320 PRPRAPVRPLDIPDFPNETPPNLRTKLPERPLSAGRSRPGMALGVRSTSNTEPSAASAPV 379
Query: 366 KR 371
K+
Sbjct: 380 KK 381
>09_04_0730 +
19783346-19783372,19783548-19783638,19783973-19784051,
19784410-19784743,19784934-19785968,19786141-19786290,
19786781-19787215
Length = 716
Score = 29.1 bits (62), Expect = 5.0
Identities = 10/18 (55%), Positives = 16/18 (88%)
Frame = +1
Query: 184 MSVIAHVDHGKSTLTDSL 237
++++ HVDHGK++L DSL
Sbjct: 200 VTIMGHVDHGKTSLLDSL 217
>05_05_0305 - 23970692-23970825,23972323-23973703
Length = 504
Score = 29.1 bits (62), Expect = 5.0
Identities = 14/39 (35%), Positives = 19/39 (48%)
Frame = +3
Query: 453 GHVDFSSEVNSCTPWSLMEPLVVVDCVSGCVCTKPKQYC 569
GH ++S+V P S M+PL C S C+ P C
Sbjct: 417 GHFTYASQVKYLRPLSSMKPLQGCGCQSVCLPGDPNCAC 455
>07_03_0911 +
22537352-22537456,22537877-22538028,22538277-22538350,
22538379-22538560,22539114-22539192,22539283-22539407,
22539575-22539656,22539870-22539931,22540362-22540778
Length = 425
Score = 28.3 bits (60), Expect = 8.7
Identities = 11/31 (35%), Positives = 17/31 (54%)
Frame = -3
Query: 826 GELFEGEKPTPXRPDPETNRALARGXHAPHP 734
G L EG+ P+P D + ++ A G +P P
Sbjct: 387 GYLIEGDDPSPSNKDEQDDQTDAHGVSSPEP 417
>04_04_1015 -
30115377-30115477,30115570-30115615,30116491-30116590,
30116676-30116771,30119519-30119556,30119623-30119733,
30119820-30119951,30120024-30120263,30120532-30120700,
30120994-30121493,30121581-30121691,30121802-30122133,
30122603-30122737,30122839-30122988,30123809-30123947
Length = 799
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +1
Query: 181 NMSVIAHVDHGKSTLTDSLV 240
N++++ HVD GKSTL+ L+
Sbjct: 249 NLAIVGHVDSGKSTLSGRLL 268
>04_04_1008 -
30054674-30054774,30054867-30054912,30055788-30055887,
30055973-30056068,30058816-30058853,30058920-30059030,
30059117-30059248,30059321-30059560,30059829-30059997,
30060291-30060790,30060878-30060988,30061099-30061430,
30061900-30062034,30062136-30062285,30063106-30063244
Length = 799
Score = 28.3 bits (60), Expect = 8.7
Identities = 10/20 (50%), Positives = 16/20 (80%)
Frame = +1
Query: 181 NMSVIAHVDHGKSTLTDSLV 240
N++++ HVD GKSTL+ L+
Sbjct: 249 NLAIVGHVDSGKSTLSGRLL 268
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,491,775
Number of Sequences: 37544
Number of extensions: 494913
Number of successful extensions: 1324
Number of sequences better than 10.0: 27
Number of HSP's better than 10.0 without gapping: 1249
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1306
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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