Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_K10
(891 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical pr... 180 2e-45
M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation fact... 180 2e-45
Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical pr... 42 4e-04
Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical pr... 42 4e-04
L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical pr... 38 0.007
AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical ... 33 0.36
D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation fact... 31 1.5
D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation fact... 31 1.5
AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongatio... 31 1.5
U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation f... 30 1.9
U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation fact... 30 1.9
U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation fact... 30 1.9
U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation fact... 30 1.9
U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation fact... 30 1.9
U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation fact... 30 1.9
U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation fact... 30 1.9
AL031627-6|CAA20958.1| 338|Caenorhabditis elegans Hypothetical ... 30 1.9
AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial... 30 1.9
Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical pr... 30 2.6
Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical p... 29 3.4
M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein. 29 3.4
U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resist... 29 4.5
M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein ( C.ele... 29 4.5
AL117204-13|CAB55128.1| 286|Caenorhabditis elegans Hypothetical... 29 5.9
AL117193-12|CAB60305.1| 415|Caenorhabditis elegans Hypothetical... 29 5.9
>Z81068-5|CAB02985.1| 852|Caenorhabditis elegans Hypothetical
protein F25H5.4 protein.
Length = 852
Score = 180 bits (437), Expect = 2e-45
Identities = 114/213 (53%), Positives = 129/213 (60%), Gaps = 10/213 (4%)
Frame = +2
Query: 278 ETRFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITXPXQRE------KSEK--GFLI 433
ETRFTDTRKDEQ+RCITIKSTAIS+FFELE+KDL F+ Q E K EK GFLI
Sbjct: 53 ETRFTDTRKDEQERCITIKSTAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLI 112
Query: 434 NLIDSPGTR*FLF*SKQLHSV--VTDGAPGGC*LCVWVCVYQTETVLRXAIXXRIKPILF 607
NLIDSPG F S ++ + VTDGA VCV QTETVLR AI RIKP+LF
Sbjct: 113 NLIDSPGHVDF---SSEVTAALRVTDGALVVVDCVSGVCV-QTETVLRQAIAERIKPVLF 168
Query: 608 MNKWTVLFLSXNLKAEELYQTFQRIVEXVXVXIATYNDDGGPWVRCVSTPXXXXXXXXXX 787
MNK L L AEEL+QTFQRIVE + V IATY DD GP + P
Sbjct: 169 MNKMDRALLELQLGAEELFQTFQRIVENINVIIATYGDDDGPMGPIMVDP-SIGNVGFGS 227
Query: 788 XXXXXLFPLKQFSEMYADXFXIDLVQPMNXLWG 886
F LKQF+EMYA F + + + M LWG
Sbjct: 228 GLHGWAFTLKQFAEMYAGKFGVQVDKLMKNLWG 260
Score = 66.1 bits (154), Expect = 3e-11
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = +1
Query: 148 RGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 246
R +MD+KRNIRNMSVIAHVDHGKSTLTDSLVSK
Sbjct: 10 RALMDRKRNIRNMSVIAHVDHGKSTLTDSLVSK 42
>M86959-1|AAD03339.1| 852|Caenorhabditis elegans elongation factor
protein.
Length = 852
Score = 180 bits (437), Expect = 2e-45
Identities = 114/213 (53%), Positives = 129/213 (60%), Gaps = 10/213 (4%)
Frame = +2
Query: 278 ETRFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITXPXQRE------KSEK--GFLI 433
ETRFTDTRKDEQ+RCITIKSTAIS+FFELE+KDL F+ Q E K EK GFLI
Sbjct: 53 ETRFTDTRKDEQERCITIKSTAISLFFELEKKDLEFVKGENQFETVEVDGKKEKYNGFLI 112
Query: 434 NLIDSPGTR*FLF*SKQLHSV--VTDGAPGGC*LCVWVCVYQTETVLRXAIXXRIKPILF 607
NLIDSPG F S ++ + VTDGA VCV QTETVLR AI RIKP+LF
Sbjct: 113 NLIDSPGHVDF---SSEVTAALGVTDGALVVVDCVSGVCV-QTETVLRQAIAERIKPVLF 168
Query: 608 MNKWTVLFLSXNLKAEELYQTFQRIVEXVXVXIATYNDDGGPWVRCVSTPXXXXXXXXXX 787
MNK L L AEEL+QTFQRIVE + V IATY DD GP + P
Sbjct: 169 MNKMDRALLELQLGAEELFQTFQRIVENINVIIATYGDDDGPMGPIMVDP-SIGNVGFGS 227
Query: 788 XXXXXLFPLKQFSEMYADXFXIDLVQPMNXLWG 886
F LKQF+EMYA F + + + M LWG
Sbjct: 228 GLHGWAFTLKQFAEMYAGKFGVQVDKLMKNLWG 260
Score = 66.1 bits (154), Expect = 3e-11
Identities = 30/33 (90%), Positives = 32/33 (96%)
Frame = +1
Query: 148 RGMMDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 246
R +MD+KRNIRNMSVIAHVDHGKSTLTDSLVSK
Sbjct: 10 RALMDRKRNIRNMSVIAHVDHGKSTLTDSLVSK 42
>Z83235-9|CAI79209.1| 705|Caenorhabditis elegans Hypothetical
protein K10C3.5b protein.
Length = 705
Score = 42.3 bits (95), Expect = 4e-04
Identities = 46/144 (31%), Positives = 68/144 (47%), Gaps = 2/144 (1%)
Frame = +2
Query: 284 RFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITXPXQREKSEKGFLINLIDSPGTR* 463
R+ D+R+DEQ R IT+KS+ IS+ E LINLIDSPG
Sbjct: 56 RYMDSREDEQTRGITMKSSGISLLCE--------------------PLLINLIDSPGHVD 95
Query: 464 FLF*SKQLHS--VVTDGAPGGC*LCVWVCVYQTETVLRXAIXXRIKPILFMNKWTVLFLS 637
F S ++ S +++D A + +C QTE ++R I IL +NK L +
Sbjct: 96 F---SGEVTSALILSDIALLLIDVIEGICS-QTEALIRQVIRNGQAMILVINKIDRLRVE 151
Query: 638 XNLKAEELYQTFQRIVEXVXVXIA 709
+ + E YQ R++E V I+
Sbjct: 152 LKMSSSEAYQHMSRLIEGVNSCIS 175
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/24 (62%), Positives = 21/24 (87%)
Frame = +1
Query: 172 NIRNMSVIAHVDHGKSTLTDSLVS 243
+IRN+ ++AHVDHGK++ DSLVS
Sbjct: 19 HIRNVCLVAHVDHGKTSFADSLVS 42
>Z83235-8|CAB05774.2| 894|Caenorhabditis elegans Hypothetical
protein K10C3.5a protein.
Length = 894
Score = 42.3 bits (95), Expect = 4e-04
Identities = 46/144 (31%), Positives = 68/144 (47%), Gaps = 2/144 (1%)
Frame = +2
Query: 284 RFTDTRKDEQDRCITIKSTAISMFFELEEKDLVFITXPXQREKSEKGFLINLIDSPGTR* 463
R+ D+R+DEQ R IT+KS+ IS+ E LINLIDSPG
Sbjct: 56 RYMDSREDEQTRGITMKSSGISLLCE--------------------PLLINLIDSPGHVD 95
Query: 464 FLF*SKQLHS--VVTDGAPGGC*LCVWVCVYQTETVLRXAIXXRIKPILFMNKWTVLFLS 637
F S ++ S +++D A + +C QTE ++R I IL +NK L +
Sbjct: 96 F---SGEVTSALILSDIALLLIDVIEGICS-QTEALIRQVIRNGQAMILVINKIDRLRVE 151
Query: 638 XNLKAEELYQTFQRIVEXVXVXIA 709
+ + E YQ R++E V I+
Sbjct: 152 LKMSSSEAYQHMSRLIEGVNSCIS 175
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/24 (62%), Positives = 21/24 (87%)
Frame = +1
Query: 172 NIRNMSVIAHVDHGKSTLTDSLVS 243
+IRN+ ++AHVDHGK++ DSLVS
Sbjct: 19 HIRNVCLVAHVDHGKTSFADSLVS 42
>L13200-4|AAA28191.2| 645|Caenorhabditis elegans Hypothetical
protein ZK1236.1 protein.
Length = 645
Score = 38.3 bits (85), Expect = 0.007
Identities = 15/22 (68%), Positives = 18/22 (81%)
Frame = +1
Query: 175 IRNMSVIAHVDHGKSTLTDSLV 240
IRN ++AHVDHGKSTL D L+
Sbjct: 42 IRNFGIVAHVDHGKSTLADRLL 63
>AC006714-2|AAK29716.2| 689|Caenorhabditis elegans Hypothetical
protein Y119D3B.14 protein.
Length = 689
Score = 32.7 bits (71), Expect = 0.36
Identities = 13/22 (59%), Positives = 19/22 (86%)
Frame = +1
Query: 175 IRNMSVIAHVDHGKSTLTDSLV 240
+RN+ VIAHVD GK+T+T+ L+
Sbjct: 25 LRNIGVIAHVDAGKTTVTERLL 46
>D38472-1|BAA07492.1| 495|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 495
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +1
Query: 181 NMSVIAHVDHGKSTLTDSL 237
N+ I HVDHGK+TLT ++
Sbjct: 51 NVGTIGHVDHGKTTLTSAI 69
>D38471-1|BAA07491.1| 496|Caenorhabditis elegans elongation factor
Tu homologueprecursor protein.
Length = 496
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +1
Query: 181 NMSVIAHVDHGKSTLTDSL 237
N+ I HVDHGK+TLT ++
Sbjct: 52 NVGTIGHVDHGKTTLTSAI 70
>AC024859-25|AAK29979.1| 496|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 1 protein.
Length = 496
Score = 30.7 bits (66), Expect = 1.5
Identities = 11/19 (57%), Positives = 15/19 (78%)
Frame = +1
Query: 181 NMSVIAHVDHGKSTLTDSL 237
N+ I HVDHGK+TLT ++
Sbjct: 52 NVGTIGHVDHGKTTLTSAI 70
>U80437-9|AAN84843.1| 439|Caenorhabditis elegans Tu elongation
factor (ef-tu), mitochondrialprotein 2 protein.
Length = 439
Score = 30.3 bits (65), Expect = 1.9
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 181 NMSVIAHVDHGKSTLTDSL 237
N+ I H+DHGK+TLT ++
Sbjct: 47 NVGTIGHIDHGKTTLTSAI 65
>U51994-9|AAO21383.1| 267|Caenorhabditis elegans Elongation factor
protein 4, isoformc protein.
Length = 267
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +1
Query: 157 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 246
M K++ N+ VI HVD GKST T L+ K
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYK 30
>U51994-8|AAO21382.1| 77|Caenorhabditis elegans Elongation factor
protein 4, isoformb protein.
Length = 77
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +1
Query: 157 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 246
M K++ N+ VI HVD GKST T L+ K
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYK 30
>U51994-7|AAO21384.1| 429|Caenorhabditis elegans Elongation factor
protein 4, isoformd protein.
Length = 429
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +1
Query: 157 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 246
M K++ N+ VI HVD GKST T L+ K
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYK 30
>U51994-6|AAA96068.1| 463|Caenorhabditis elegans Elongation factor
protein 4, isoforma protein.
Length = 463
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +1
Query: 157 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 246
M K++ N+ VI HVD GKST T L+ K
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYK 30
>U50193-2|AAA91248.1| 974|Caenorhabditis elegans Elongation factor
protein 1 protein.
Length = 974
Score = 30.3 bits (65), Expect = 1.9
Identities = 11/31 (35%), Positives = 20/31 (64%)
Frame = +1
Query: 154 MMDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 246
+MD +RN+++ H+ HGK+T D L+ +
Sbjct: 125 LMDCPHIMRNVAIAGHLHHGKTTFLDCLMEQ 155
>U40935-2|AAA81688.1| 463|Caenorhabditis elegans Elongation factor
protein 3 protein.
Length = 463
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/30 (50%), Positives = 19/30 (63%)
Frame = +1
Query: 157 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 246
M K++ N+ VI HVD GKST T L+ K
Sbjct: 1 MGKEKVHINIVVIGHVDSGKSTTTGHLIYK 30
>AL031627-6|CAA20958.1| 338|Caenorhabditis elegans Hypothetical
protein Y102A5C.15 protein.
Length = 338
Score = 30.3 bits (65), Expect = 1.9
Identities = 15/42 (35%), Positives = 25/42 (59%)
Frame = -1
Query: 444 SIKLIKKPFSLFSRXSGFVMNTKSFSSSSKNIEMAVDLMVMQ 319
S+ L+ PF L +R +G+ + FSS S + MAV ++ +Q
Sbjct: 68 SVTLLGIPFILATRLAGYSLGLLKFSSYSFLVTMAVSVLSLQ 109
>AB010028-1|BAA31345.1| 439|Caenorhabditis elegans mitochondrial
elongation factorTu homologue protein.
Length = 439
Score = 30.3 bits (65), Expect = 1.9
Identities = 10/19 (52%), Positives = 15/19 (78%)
Frame = +1
Query: 181 NMSVIAHVDHGKSTLTDSL 237
N+ I H+DHGK+TLT ++
Sbjct: 47 NVGTIGHIDHGKTTLTSAI 65
>Z81519-1|CAB04216.1| 750|Caenorhabditis elegans Hypothetical
protein F29C12.4 protein.
Length = 750
Score = 29.9 bits (64), Expect = 2.6
Identities = 10/22 (45%), Positives = 18/22 (81%)
Frame = +1
Query: 175 IRNMSVIAHVDHGKSTLTDSLV 240
IRN+ + AH+D GK+T+T+ ++
Sbjct: 44 IRNIGISAHIDSGKTTVTERIL 65
>Z70780-15|CAA94822.2| 702|Caenorhabditis elegans Hypothetical
protein F46B6.6a protein.
Length = 702
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/26 (42%), Positives = 19/26 (73%)
Frame = +1
Query: 160 DKKRNIRNMSVIAHVDHGKSTLTDSL 237
D +R ++++ HVDHGK+TL D++
Sbjct: 151 DLERRPPIVTIMGHVDHGKTTLLDAM 176
>M86958-1|AAA21824.1| 849|Caenorhabditis elegans eft-1 protein.
Length = 849
Score = 29.5 bits (63), Expect = 3.4
Identities = 11/30 (36%), Positives = 19/30 (63%)
Frame = +1
Query: 157 MDKKRNIRNMSVIAHVDHGKSTLTDSLVSK 246
MD +RN+++ H+ HGK+T D L+ +
Sbjct: 1 MDCPHIMRNVAIAGHLHHGKTTFLDCLMEQ 30
>U53333-5|AAA96158.2| 1852|Caenorhabditis elegans Amanitin resistant
protein 1 protein.
Length = 1852
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 208 DRRGRSQTCCGYSASCPSSHG 146
DRRGR TC G CP G
Sbjct: 61 DRRGRCMTCAGNLTDCPGHFG 81
>M29235-1|AAA28126.1| 1859|Caenorhabditis elegans protein (
C.elegans RNA polymeraseII largest subunit (ama-1 IV)
gene, complete cds. ).
Length = 1859
Score = 29.1 bits (62), Expect = 4.5
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = -3
Query: 208 DRRGRSQTCCGYSASCPSSHG 146
DRRGR TC G CP G
Sbjct: 61 DRRGRCMTCAGNLTDCPGHFG 81
>AL117204-13|CAB55128.1| 286|Caenorhabditis elegans Hypothetical
protein Y116A8C.22 protein.
Length = 286
Score = 28.7 bits (61), Expect = 5.9
Identities = 15/49 (30%), Positives = 26/49 (53%)
Frame = -1
Query: 522 QPPGAPSVTTECSCLLQKRNQRVPGESIKLIKKPFSLFSRXSGFVMNTK 376
+P GA + E + +LQK+ QR G +K+ KK +F + N++
Sbjct: 126 RPAGAAKWSQEVAVVLQKQPQRKRGRPLKIAKKIEPVFHQKKESKQNSE 174
>AL117193-12|CAB60305.1| 415|Caenorhabditis elegans Hypothetical
protein Y105C5A.23 protein.
Length = 415
Score = 28.7 bits (61), Expect = 5.9
Identities = 11/32 (34%), Positives = 19/32 (59%)
Frame = +3
Query: 264 VREPERPVSLTRVRTNKTVASPLNLRPSLCSS 359
++EPE+P++ R+ + PL RPS+ S
Sbjct: 286 IKEPEKPMTTPRIVVSDETEVPLTQRPSISPS 317
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,664,868
Number of Sequences: 27780
Number of extensions: 416451
Number of successful extensions: 1120
Number of sequences better than 10.0: 25
Number of HSP's better than 10.0 without gapping: 962
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1101
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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