Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_K09
         (896 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    25   0.71 
DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.    25   1.2  
AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    23   2.9  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   2.9  
DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase ...    22   6.6  
DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase ...    22   6.6  

>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 25.4 bits (53), Expect = 0.71
 Identities = 8/11 (72%), Positives = 8/11 (72%)
 Frame = +3

Query: 639 PXXPXPPPPPP 671
           P  P PPPPPP
Sbjct: 338 PPKPAPPPPPP 348



 Score = 22.6 bits (46), Expect = 5.0
 Identities = 7/10 (70%), Positives = 7/10 (70%)
 Frame = +3

Query: 648 PXPPPPPPXP 677
           P P PPPP P
Sbjct: 339 PKPAPPPPPP 348



 Score = 22.2 bits (45), Expect = 6.6
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +1

Query: 640 PXXPXPPXPPP 672
           P  P PP PPP
Sbjct: 338 PPKPAPPPPPP 348


>DQ011226-1|AAY63895.1|  471|Apis mellifera Rh-like protein protein.
          Length = 471

 Score = 24.6 bits (51), Expect = 1.2
 Identities = 9/27 (33%), Positives = 15/27 (55%)
 Frame = +3

Query: 435 LLCHIMLCGSSNILVIFDYXSHWPFSE 515
           L+  +++CGS +    FD  +HW   E
Sbjct: 421 LIMRVLICGSISEEQKFDDEAHWELEE 447


>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 648  PXPPPPPP 671
            P PPPPPP
Sbjct: 1355 PPPPPPPP 1362



 Score = 23.4 bits (48), Expect = 2.9
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 654  PPPPPPXP 677
            PPPPPP P
Sbjct: 1355 PPPPPPPP 1362


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.4 bits (48), Expect = 2.9
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +3

Query: 648  PXPPPPPP 671
            P PPPPPP
Sbjct: 1857 PEPPPPPP 1864


>DQ013068-1|AAY81956.1|  931|Apis mellifera dusty protein kinase
           isoform B protein.
          Length = 931

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -3

Query: 171 SPAPTRRRSSKYVRNSFYRNSI 106
           SP PT+RR+ K V+   +  ++
Sbjct: 903 SPPPTKRRTMKVVKYHLFLTNL 924


>DQ013067-1|AAY81955.1|  969|Apis mellifera dusty protein kinase
            isoform A protein.
          Length = 969

 Score = 22.2 bits (45), Expect = 6.6
 Identities = 8/22 (36%), Positives = 14/22 (63%)
 Frame = -3

Query: 171  SPAPTRRRSSKYVRNSFYRNSI 106
            SP PT+RR+ K V+   +  ++
Sbjct: 941  SPPPTKRRTMKVVKYHLFLTNL 962


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 202,506
Number of Sequences: 438
Number of extensions: 5070
Number of successful extensions: 17
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 14
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29025360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)