Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_K08
(930 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_03_1012 + 23295976-23296264,23296475-23296548,23296972-232969... 33 0.32
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 32 0.57
08_01_0202 - 1638978-1639571 32 0.75
06_01_0486 - 3455030-3455770 32 0.75
03_01_0515 - 3864796-3865425 30 2.3
12_02_0848 + 23636478-23638058 29 4.0
07_03_0558 + 19461369-19462448 29 5.3
03_04_0231 + 19050105-19050567,19051376-19052648,19052743-19054171 29 5.3
06_03_0790 - 24636805-24637770 29 7.0
03_02_0071 + 5425722-5427154,5427259-5427464,5428445-5428686,542... 29 7.0
01_06_1678 - 39095986-39096205,39096400-39096477,39096578-390969... 29 7.0
08_01_0059 - 394001-394708 28 9.2
07_03_1710 - 28903614-28903673,28904982-28905146,28905453-289056... 28 9.2
07_01_0725 - 5532803-5533324,5533631-5533657,5534285-5534398,553... 28 9.2
06_03_0757 + 24267599-24268882 28 9.2
>07_03_1012 +
23295976-23296264,23296475-23296548,23296972-23296996,
23297486-23297568,23297653-23297685,23298322-23298469,
23298625-23298722
Length = 249
Score = 33.1 bits (72), Expect = 0.32
Identities = 15/31 (48%), Positives = 17/31 (54%)
Frame = -3
Query: 922 GGVWXGXNGXGIGGGXAIXTRPWGWEGGSRV 830
GG G +G G GGG RPWG GG+ V
Sbjct: 27 GGGGGGGSGGGGGGGRWSGVRPWGSSGGTSV 57
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 32.3 bits (70), Expect = 0.57
Identities = 17/44 (38%), Positives = 17/44 (38%)
Frame = +1
Query: 682 DAXXPRPXLXSPPTXPXXRPXXPXPRRPSPLXXCPXHXPCASPS 813
DA P P PP P P P PSP P P SPS
Sbjct: 1135 DAPPPPPLPEGPPPLPSDSPPCQPPLPPSPPPATPPPPPPLSPS 1178
Score = 30.7 bits (66), Expect = 1.7
Identities = 14/39 (35%), Positives = 15/39 (38%)
Frame = +1
Query: 694 PRPXLXSPPTXPXXRPXXPXPRRPSPLXXCPXHXPCASP 810
P P +PP P P P P P PL P P P
Sbjct: 1162 PSPPPATPPPPPPLSPSLPPPPPPPPLPSGPPPQPAPPP 1200
>08_01_0202 - 1638978-1639571
Length = 197
Score = 31.9 bits (69), Expect = 0.75
Identities = 22/70 (31%), Positives = 24/70 (34%)
Frame = -3
Query: 922 GGVWXGXNGXGIGGGXAIXTRPWGWEGGSRVCXQXGTKGRRXEXXXDXGXXGKXGAXRGX 743
GG G G G GGG G GGSR C + G +G G G G
Sbjct: 111 GGYGGGDRGYGGGGGYG-----GGGGGGSRACYKCGEEGHMARDCSQGGGGGGGYGGGGG 165
Query: 742 XAXAXGXWGG 713
G GG
Sbjct: 166 GYRGGGGGGG 175
>06_01_0486 - 3455030-3455770
Length = 246
Score = 31.9 bits (69), Expect = 0.75
Identities = 15/38 (39%), Positives = 16/38 (42%)
Frame = +1
Query: 694 PRPXLXSPPTXPXXRPXXPXPRRPSPLXXCPXHXPCAS 807
P P PPT P P P P PSP P P A+
Sbjct: 119 PTPPYVPPPTPPSPPPYVPPPTPPSPPPYVPPPSPPAT 156
>03_01_0515 - 3864796-3865425
Length = 209
Score = 30.3 bits (65), Expect = 2.3
Identities = 16/41 (39%), Positives = 17/41 (41%), Gaps = 2/41 (4%)
Frame = +1
Query: 694 PRPXLXSPPTXPXXRPXXPXPR--RPSPLXXCPXHXPCASP 810
P P L PP P P P P PSP+ P P SP
Sbjct: 84 PPPPLPPPPPPPAASPPPPPPSPPPPSPVKSSPPPPPAWSP 124
>12_02_0848 + 23636478-23638058
Length = 526
Score = 29.5 bits (63), Expect = 4.0
Identities = 12/31 (38%), Positives = 14/31 (45%)
Frame = +1
Query: 679 GDAXXPRPXLXSPPTXPXXRPXXPXPRRPSP 771
GD P P + + P P P P PRR P
Sbjct: 61 GDTPPPPPIIDASPPPPSTSPPPPPPRRGRP 91
>07_03_0558 + 19461369-19462448
Length = 359
Score = 29.1 bits (62), Expect = 5.3
Identities = 19/70 (27%), Positives = 23/70 (32%)
Frame = -3
Query: 922 GGVWXGXNGXGIGGGXAIXTRPWGWEGGSRVCXQXGTKGRRXEXXXDXGXXGKXGAXRGX 743
GG G +G G GGG + + G GG G G G G G
Sbjct: 248 GGGLGGGHGGGFGGGAGVGSGAGGGVGGGGGFGGGGGGGLGGGHGSGFGGGAGVGGGAGG 307
Query: 742 XAXAXGXWGG 713
G +GG
Sbjct: 308 GVGGGGGFGG 317
Score = 28.3 bits (60), Expect = 9.2
Identities = 20/70 (28%), Positives = 22/70 (31%)
Frame = -3
Query: 922 GGVWXGXNGXGIGGGXAIXTRPWGWEGGSRVCXQXGTKGRRXEXXXDXGXXGKXGAXRGX 743
GG G +G G GGG + G GG G G G G G G
Sbjct: 180 GGGLGGGHGGGFGGGAGVGGGAGGGVGGGGGFGGGGGSGLGGGQGGGFGAGGGAGGGIGG 239
Query: 742 XAXAXGXWGG 713
G GG
Sbjct: 240 GGGFGGGGGG 249
>03_04_0231 + 19050105-19050567,19051376-19052648,19052743-19054171
Length = 1054
Score = 29.1 bits (62), Expect = 5.3
Identities = 14/29 (48%), Positives = 15/29 (51%)
Frame = -3
Query: 922 GGVWXGXNGXGIGGGXAIXTRPWGWEGGS 836
GG+ G NG G GGG A R W G S
Sbjct: 21 GGLGTGGNGGGGGGGSANGRRRWRGGGSS 49
>06_03_0790 - 24636805-24637770
Length = 321
Score = 28.7 bits (61), Expect = 7.0
Identities = 21/69 (30%), Positives = 21/69 (30%)
Frame = -3
Query: 919 GVWXGXNGXGIGGGXAIXTRPWGWEGGSRVCXQXGTKGRRXEXXXDXGXXGKXGAXRGXX 740
GVW G G G GGG G GG G G G G G G
Sbjct: 78 GVWSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGGG 137
Query: 739 AXAXGXWGG 713
G GG
Sbjct: 138 GGGGGGGGG 146
>03_02_0071 +
5425722-5427154,5427259-5427464,5428445-5428686,
5428788-5429570
Length = 887
Score = 28.7 bits (61), Expect = 7.0
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = +3
Query: 393 PPPPXPXXTNQNVPRPAXLP 452
PPPP +N N+P+PA P
Sbjct: 377 PPPPPSVPSNNNLPKPAEPP 396
>01_06_1678 -
39095986-39096205,39096400-39096477,39096578-39096949,
39097374-39097671,39097867-39098077,39098331-39099023
Length = 623
Score = 28.7 bits (61), Expect = 7.0
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +1
Query: 694 PRPXLXSPPTXPXXRPXXPXPRRPSPLXXCPXHXPCASP 810
PRP PP P P P P P P P PC P
Sbjct: 117 PRP----PPPPPPHPPEDPPPHPPHPPDHPPPPPPCRVP 151
>08_01_0059 - 394001-394708
Length = 235
Score = 28.3 bits (60), Expect = 9.2
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = +1
Query: 694 PRPXLXSPPTXPXXRPXXPXPRRPSPLXXCPXHXPCASP 810
P P PP P RP P P P P P P A P
Sbjct: 19 PPPRRAPPPPSPPIRP--PPPPTPRPYAPPPPSHPLAPP 55
>07_03_1710 -
28903614-28903673,28904982-28905146,28905453-28905638,
28905784-28905927,28906281-28906460,28906559-28907215
Length = 463
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/29 (41%), Positives = 13/29 (44%)
Frame = +1
Query: 685 AXXPRPXLXSPPTXPXXRPXXPXPRRPSP 771
A P+P PP P P P R PSP
Sbjct: 55 APPPKPSPTPPPASPPPAPTPPQTRPPSP 83
>07_01_0725 -
5532803-5533324,5533631-5533657,5534285-5534398,
5534564-5534731,5535951-5536193,5537178-5537261,
5537357-5538117,5539637-5539730,5540633-5540899,
5541311-5541316,5542538-5542657
Length = 801
Score = 28.3 bits (60), Expect = 9.2
Identities = 12/25 (48%), Positives = 14/25 (56%)
Frame = -3
Query: 907 GXNGXGIGGGXAIXTRPWGWEGGSR 833
G G G GGG A +RP GW+ R
Sbjct: 255 GRGGGGGGGGGAWNSRPGGWDRRDR 279
>06_03_0757 + 24267599-24268882
Length = 427
Score = 28.3 bits (60), Expect = 9.2
Identities = 21/71 (29%), Positives = 23/71 (32%), Gaps = 1/71 (1%)
Frame = -3
Query: 922 GGVWXGXNGXGIG-GGXAIXTRPWGWEGGSRVCXQXGTKGRRXEXXXDXGXXGKXGAXRG 746
G + G G G G GG A T P G GG G G G+ G G
Sbjct: 244 GCISSGGGGGGSGSGGGARQTFPGGGTGGGGFPAGQARTGGNTNRRNRKGNGGRGGGNGG 303
Query: 745 XXAXAXGXWGG 713
G GG
Sbjct: 304 GNGGGSGGGGG 314
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,643,916
Number of Sequences: 37544
Number of extensions: 383003
Number of successful extensions: 2106
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1307
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1958
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2659245980
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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