Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_K08
(930 letters)
Database: fruitfly
53,049 sequences; 24,988,368 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY071733-1|AAL49355.1| 77|Drosophila melanogaster RH45008p pro... 43 5e-04
AE014298-1291|AAF46455.1| 77|Drosophila melanogaster CG9034-PA... 43 5e-04
AY121649-1|AAM51976.1| 950|Drosophila melanogaster LD23647p pro... 31 3.0
AE014134-2238|AAF53220.2| 950|Drosophila melanogaster CG5787-PA... 31 3.0
X05285-1|CAA28903.1| 147|Drosophila melanogaster fibrillarin pr... 30 3.9
BT001738-1|AAN71493.1| 331|Drosophila melanogaster RE72617p pro... 30 3.9
AE013599-3536|AAF46950.1| 344|Drosophila melanogaster CG9888-PA... 30 3.9
BT003654-1|AAO39658.1| 1273|Drosophila melanogaster AT04875p pro... 30 5.2
AE014297-1715|AAN13574.1| 325|Drosophila melanogaster CG12749-P... 29 6.9
AE014296-2897|AAF49349.4| 926|Drosophila melanogaster CG13731-P... 29 6.9
>AY071733-1|AAL49355.1| 77|Drosophila melanogaster RH45008p
protein.
Length = 77
Score = 43.2 bits (97), Expect = 5e-04
Identities = 19/32 (59%), Positives = 21/32 (65%)
Frame = +3
Query: 216 NYXKNDGDNRRYKGTYVVMRPDDPRVKLIRXE 311
NY DGDNRRYK YVV R DDPR +R +
Sbjct: 43 NYYAKDGDNRRYKLGYVVYRHDDPRALKVRND 74
>AE014298-1291|AAF46455.1| 77|Drosophila melanogaster CG9034-PA
protein.
Length = 77
Score = 43.2 bits (97), Expect = 5e-04
Identities = 19/32 (59%), Positives = 21/32 (65%)
Frame = +3
Query: 216 NYXKNDGDNRRYKGTYVVMRPDDPRVKLIRXE 311
NY DGDNRRYK YVV R DDPR +R +
Sbjct: 43 NYYAKDGDNRRYKLGYVVYRHDDPRALKVRND 74
>AY121649-1|AAM51976.1| 950|Drosophila melanogaster LD23647p
protein.
Length = 950
Score = 30.7 bits (66), Expect = 3.0
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -3
Query: 922 GGVWXGXNGXGIGGGXAIXTRPWGWEGGSR 833
GG G G G GGG + + GWE G R
Sbjct: 423 GGRSGGGGGGGAGGGGGVGSGGSGWEAGQR 452
>AE014134-2238|AAF53220.2| 950|Drosophila melanogaster CG5787-PA
protein.
Length = 950
Score = 30.7 bits (66), Expect = 3.0
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = -3
Query: 922 GGVWXGXNGXGIGGGXAIXTRPWGWEGGSR 833
GG G G G GGG + + GWE G R
Sbjct: 423 GGRSGGGGGGGAGGGGGVGSGGSGWEAGQR 452
>X05285-1|CAA28903.1| 147|Drosophila melanogaster fibrillarin
protein.
Length = 147
Score = 30.3 bits (65), Expect = 3.9
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -2
Query: 818 RNEGEAXGXXXGQXXXGEGRRGXGXXGLXXGXVGGEXSXGRG 693
R G G G G GR G G G G GG GRG
Sbjct: 30 RGRGGGGGGGGGGFGGGRGRGGGGDRGGRGGFGGGRGGGGRG 71
>BT001738-1|AAN71493.1| 331|Drosophila melanogaster RE72617p
protein.
Length = 331
Score = 30.3 bits (65), Expect = 3.9
Identities = 22/70 (31%), Positives = 25/70 (35%)
Frame = -3
Query: 922 GGVWXGXNGXGIGGGXAIXTRPWGWEGGSRVCXQXGTKGRRXEXXXDXGXXGKXGAXRGX 743
GG + G G G GGG GG R + G G R G G+ G RG
Sbjct: 19 GGGFRGRGGGGGGGGGGFGGGRGRGGGGDRG-GRGGFGGGRGAFGGRGGGGGRGGGGRGG 77
Query: 742 XAXAXGXWGG 713
G GG
Sbjct: 78 GGRGGGGRGG 87
>AE013599-3536|AAF46950.1| 344|Drosophila melanogaster CG9888-PA
protein.
Length = 344
Score = 30.3 bits (65), Expect = 3.9
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -2
Query: 818 RNEGEAXGXXXGQXXXGEGRRGXGXXGLXXGXVGGEXSXGRG 693
R G G G G GR G G G G GG GRG
Sbjct: 23 RGRGGGGGGGGGGFGGGRGRGGGGDRGGRGGFGGGRGGGGRG 64
>BT003654-1|AAO39658.1| 1273|Drosophila melanogaster AT04875p
protein.
Length = 1273
Score = 29.9 bits (64), Expect = 5.2
Identities = 16/46 (34%), Positives = 18/46 (39%)
Frame = +1
Query: 694 PRPXLXSPPTXPXXRPXXPXPRRPSPLXXCPXHXPCASPSFRLAXT 831
P P + + PT P P P P P P SPS LA T
Sbjct: 698 PPPPMPASPTASSAAPPPPPPPAPPAPPPPPGFSPLGSPSGSLAST 743
>AE014297-1715|AAN13574.1| 325|Drosophila melanogaster CG12749-PB,
isoform B protein.
Length = 325
Score = 29.5 bits (63), Expect = 6.9
Identities = 15/38 (39%), Positives = 17/38 (44%)
Frame = -3
Query: 919 GVWXGXNGXGIGGGXAIXTRPWGWEGGSRVCXQXGTKG 806
G W G G G GGG + + WG GG Q G G
Sbjct: 284 GGWNGGGGGGYGGGNSNGS--WGGNGGGGGGGQGGNMG 319
>AE014296-2897|AAF49349.4| 926|Drosophila melanogaster CG13731-PA
protein.
Length = 926
Score = 29.5 bits (63), Expect = 6.9
Identities = 11/19 (57%), Positives = 11/19 (57%)
Frame = +1
Query: 715 PPTXPXXRPXXPXPRRPSP 771
PPT P RP P P RP P
Sbjct: 559 PPTRPPTRPPTPPPTRPPP 577
Database: fruitfly
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 24,988,368
Number of sequences in database: 53,049
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 31,134,262
Number of Sequences: 53049
Number of extensions: 573034
Number of successful extensions: 2387
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1648
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2292
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4587341472
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -