Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_K06
(944 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 37 0.004
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 36 0.008
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 36 0.008
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 34 0.034
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 33 0.077
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 32 0.10
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 32 0.14
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 32 0.14
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 31 0.24
SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr 1... 29 1.3
SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr 1... 29 1.3
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 28 1.7
SPAC30D11.14c |||RNA-binding protein |Schizosaccharomyces pombe|... 27 2.9
SPAC26A3.09c |rga2||GTPase activating protein Rga2|Schizosacchar... 24 3.6
SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr 2... 27 3.8
SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein Cap1|S... 27 5.1
SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr 1|||M... 27 5.1
SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces... 27 5.1
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 26 8.9
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 37.1 bits (82), Expect = 0.004
Identities = 19/49 (38%), Positives = 20/49 (40%), Gaps = 1/49 (2%)
Frame = +1
Query: 487 SPAGXXAXXXPPXXPX*XPPPPPPPPLXXXR-XXPPPXTRRSXXPXXPP 630
SP G A P P P PP P P + PPP R S P PP
Sbjct: 711 SPMGTGAVNSPAIKPQVTPAPPTPAPTPAVKHHPPPPPVRSSISPSMPP 759
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 35.9 bits (79), Expect = 0.008
Identities = 19/61 (31%), Positives = 21/61 (34%)
Frame = +2
Query: 380 PPXPTTPPXXPKXPPPPXXGXXXXXPXXKPRPXXXXAPXAXXPXXXXRPXPXXXPPPPLP 559
PP P+ PP P PP P P P AP P P PP +P
Sbjct: 144 PPRPSIPPPSPASAPP-IPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVP 202
Query: 560 P 562
P
Sbjct: 203 P 203
Score = 27.1 bits (57), Expect = 3.8
Identities = 25/97 (25%), Positives = 29/97 (29%), Gaps = 1/97 (1%)
Frame = +1
Query: 355 PKAXRXXXXTXTXHPPXXPQAPPAXXGGXGXPRXXXKTXPXXGXSPAGXXAXXXPPXXPX 534
PK + + PP P APP P SPA A P P
Sbjct: 110 PKLRHIGKSSASAAPPSAP-APPTPQSELRPPTSAPPRPSIPPPSPAS--APPIPSKAPP 166
Query: 535 *XPP-PPPPPPLXXXRXXPPPXTRRSXXPXXPPPHXP 642
PPP P + P + S P PP P
Sbjct: 167 IPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPP 203
Score = 25.8 bits (54), Expect = 8.9
Identities = 9/18 (50%), Positives = 9/18 (50%)
Frame = +1
Query: 541 PPPPPPPPLXXXRXXPPP 594
PPPPPP P PP
Sbjct: 5 PPPPPPAPAPAAAAPAPP 22
Score = 25.8 bits (54), Expect = 8.9
Identities = 22/85 (25%), Positives = 23/85 (27%)
Frame = +1
Query: 397 PPXXPQAPPAXXGGXGXPRXXXKTXPXXGXSPAGXXAXXXPPXXPX*XPPPPPPPPLXXX 576
PP APP P + A P P PP PPPPL
Sbjct: 151 PPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPP-MPPKVPPPPLSQA 209
Query: 577 RXXPPPXTRRSXXPXXPPPHXPQXT 651
S P P H P T
Sbjct: 210 PVANTSSRPSSFAP--PAGHAPNVT 232
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 35.9 bits (79), Expect = 0.008
Identities = 15/34 (44%), Positives = 16/34 (47%)
Frame = +1
Query: 544 PPPPPPPLXXXRXXPPPXTRRSXXPXXPPPHXPQ 645
PPPPPPP R PP S PPP P+
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPR 344
Score = 35.5 bits (78), Expect = 0.011
Identities = 22/82 (26%), Positives = 28/82 (34%), Gaps = 2/82 (2%)
Frame = +2
Query: 353 PPKXKGXXXPPXPTTPPXXPKXPPPPXXGXXXXXPXXKPRPXXXXAPXAXXP--XXXXRP 526
PP+ + PP P + P + PPP P P + A P
Sbjct: 354 PPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGNASRTS 413
Query: 527 XPXXXPPPPLPPXSXXPXHXPP 592
P PP LPP + P PP
Sbjct: 414 TPPVPTPPSLPPSA--PPSLPP 433
Score = 33.9 bits (74), Expect = 0.034
Identities = 15/34 (44%), Positives = 15/34 (44%)
Frame = +1
Query: 541 PPPPPPPPLXXXRXXPPPXTRRSXXPXXPPPHXP 642
PPPPPPP P P RS P PP P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAP 370
Score = 33.5 bits (73), Expect = 0.044
Identities = 27/103 (26%), Positives = 31/103 (30%), Gaps = 7/103 (6%)
Frame = +1
Query: 355 PKAXRXXXXTXTXHPPXXPQAPPAXXGGXGXPRXXX----KTXPXXGXSPAGXXAXXXP- 519
P + R + P PP G P + P P A P
Sbjct: 294 PPSSRVSAAALAANKKRPPPPPPPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPL 353
Query: 520 PXXPX*XPPPPPPPPLXXXRXXPPPXT--RRSXXPXXPPPHXP 642
P PPPPPP PPP + R P PPP P
Sbjct: 354 PPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP 396
Score = 32.3 bits (70), Expect = 0.10
Identities = 19/56 (33%), Positives = 21/56 (37%)
Frame = +1
Query: 397 PPXXPQAPPAXXGGXGXPRXXXKTXPXXGXSPAGXXAXXXPPXXPX*XPPPPPPPP 564
P P APP+ G + P PAG A PP P PPP P P
Sbjct: 429 PSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPA--APPLPPAAPAPPPAPAP 482
Score = 29.9 bits (64), Expect = 0.55
Identities = 28/88 (31%), Positives = 30/88 (34%), Gaps = 1/88 (1%)
Frame = +2
Query: 344 TXXPPKXKGXXXPPXPTTPPXXPKXPPPPXXGXXXXXPXXKPRPXXXXAPXAXXPXXXXR 523
T PP PP + PP P PP P P P AP A
Sbjct: 412 TSTPPVPTPPSLPP--SAPPSLPPSAPP---SLPMGAPAAPPLP--PSAPIAP------- 457
Query: 524 PXPXXXP-PPPLPPXSXXPXHXPPPXXA 604
P P P PPLPP + P P P A
Sbjct: 458 PLPAGMPAAPPLPPAAPAPPPAPAPAPA 485
Score = 29.1 bits (62), Expect = 0.95
Identities = 19/66 (28%), Positives = 21/66 (31%), Gaps = 1/66 (1%)
Frame = +2
Query: 353 PPKXKGXXXPPX-PTTPPXXPKXPPPPXXGXXXXXPXXKPRPXXXXAPXAXXPXXXXRPX 529
PP P P+ P PPP G P PRP AP + P
Sbjct: 233 PPSIPSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRP---IAPVSMNPAINSTSK 289
Query: 530 PXXXPP 547
P PP
Sbjct: 290 PPLPPP 295
Score = 26.6 bits (56), Expect = 5.1
Identities = 22/87 (25%), Positives = 26/87 (29%), Gaps = 2/87 (2%)
Frame = +2
Query: 353 PPKXKGXXXPP--XPTTPPXXPKXPPPPXXGXXXXXPXXKPRPXXXXAPXAXXPXXXXRP 526
PP + PP ++ P PPPP P P AP P P
Sbjct: 316 PPSRRNRGKPPIGNGSSNSSLPPPPPPPRSNAAGSIPLP---PQGRSAP--PPPPPRSAP 370
Query: 527 XPXXXPPPPLPPXSXXPXHXPPPXXAG 607
PPP + PPP G
Sbjct: 371 STGRQPPPLSSSRAVSNPPAPPPAIPG 397
Score = 26.2 bits (55), Expect = 6.7
Identities = 25/85 (29%), Positives = 25/85 (29%), Gaps = 3/85 (3%)
Frame = +1
Query: 397 PPXXPQAPPAXXGGXGXPRXXXKTX---PXXGXSPAGXXAXXXPPXXPX*XPPPPPPPPL 567
PP APP PR T P S A PP P P PP
Sbjct: 354 PPQGRSAPPPPP-----PRSAPSTGRQPPPLSSSRAVSNPPAPPPAIPGRSAPALPPLGN 408
Query: 568 XXXRXXPPPXTRRSXXPXXPPPHXP 642
PP T S P PP P
Sbjct: 409 ASRTSTPPVPTPPSLPPSAPPSLPP 433
Score = 26.2 bits (55), Expect = 6.7
Identities = 20/75 (26%), Positives = 23/75 (30%), Gaps = 1/75 (1%)
Frame = +1
Query: 409 PQAPPAXXGGXGXPRXXXKTXPXXGXSPAGXXAXXXPPXXPX*XPPPPPPP-PLXXXRXX 585
P APP G P +P PP P PP PP P+
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAP 447
Query: 586 PPPXTRRSXXPXXPP 630
P P + P PP
Sbjct: 448 PLPPS----APIAPP 458
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 33.9 bits (74), Expect = 0.034
Identities = 17/51 (33%), Positives = 18/51 (35%)
Frame = +1
Query: 490 PAGXXAXXXPPXXPX*XPPPPPPPPLXXXRXXPPPXTRRSXXPXXPPPHXP 642
P A P P P PPP P + PPP P PPP P
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 33.9 bits (74), Expect = 0.034
Identities = 15/36 (41%), Positives = 16/36 (44%)
Frame = +1
Query: 487 SPAGXXAXXXPPXXPX*XPPPPPPPPLXXXRXXPPP 594
+PA PP PPPPPPPP PPP
Sbjct: 743 TPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Score = 33.1 bits (72), Expect = 0.059
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 2/52 (3%)
Frame = +2
Query: 413 KXPPPPXXGXXXXXPXXKPRPXXXXAPXAXXPXXXXRP--XPXXXPPPPLPP 562
K PPPP P P P AP P P PPPP PP
Sbjct: 730 KSPPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPP 781
Score = 28.3 bits (60), Expect = 1.7
Identities = 14/43 (32%), Positives = 14/43 (32%)
Frame = +2
Query: 467 PRPXXXXAPXAXXPXXXXRPXPXXXPPPPLPPXSXXPXHXPPP 595
P P A P P P PPP PP PPP
Sbjct: 735 PPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPP 777
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/36 (38%), Positives = 14/36 (38%), Gaps = 6/36 (16%)
Frame = +1
Query: 544 PPPPPP------PLXXXRXXPPPXTRRSXXPXXPPP 633
PPPPPP P PPP P PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPP 767
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 32.7 bits (71), Expect = 0.077
Identities = 23/71 (32%), Positives = 26/71 (36%), Gaps = 1/71 (1%)
Frame = +2
Query: 359 KXKGXXXPPXP-TTPPXXPKXPPPPXXGXXXXXPXXKPRPXXXXAPXAXXPXXXXRPXPX 535
K G P P +TPP P+ PP P P P P + P P
Sbjct: 1676 KLFGGMAPAHPVSTPPVRPQSAAPPQMS----APTPPPPPMSVPPPPSAPPMP---AGPP 1728
Query: 536 XXPPPPLPPXS 568
PPPPLP S
Sbjct: 1729 SAPPPPLPASS 1739
Score = 30.7 bits (66), Expect = 0.31
Identities = 16/40 (40%), Positives = 16/40 (40%), Gaps = 1/40 (2%)
Frame = +1
Query: 517 PPXXPX*XPPPPP-PPPLXXXRXXPPPXTRRSXXPXXPPP 633
PP P PPPP PP PPP S P P P
Sbjct: 1707 PPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 27.9 bits (59), Expect = 2.2
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = +2
Query: 353 PPKXKGXXXPPXPTTPPXXPKXPPPP 430
PP+ PP P + P P PP P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMP 1724
Score = 27.5 bits (58), Expect = 2.9
Identities = 15/44 (34%), Positives = 15/44 (34%), Gaps = 3/44 (6%)
Frame = +2
Query: 353 PPKXKGXXXPPX---PTTPPXXPKXPPPPXXGXXXXXPXXKPRP 475
PP PP PT PP PPPP P P P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPP 1733
Score = 27.5 bits (58), Expect = 2.9
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 524 PXPXXXPPPPLPPXSXXPXHXPPPXXAG 607
P P PP PP S P PP AG
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAG 1726
Score = 27.5 bits (58), Expect = 2.9
Identities = 14/35 (40%), Positives = 16/35 (45%), Gaps = 2/35 (5%)
Frame = +1
Query: 544 PPPPPPPLXXXRXXPPPXT--RRSXXPXXPPPHXP 642
P PPPPP+ PPP + P PPP P
Sbjct: 1705 PTPPPPPMSVP---PPPSAPPMPAGPPSAPPPPLP 1736
Score = 27.1 bits (57), Expect = 3.8
Identities = 11/29 (37%), Positives = 11/29 (37%)
Frame = +2
Query: 344 TXXPPKXKGXXXPPXPTTPPXXPKXPPPP 430
T PP P P P P PPPP
Sbjct: 1706 TPPPPPMSVPPPPSAPPMPAGPPSAPPPP 1734
Score = 26.2 bits (55), Expect = 6.7
Identities = 15/46 (32%), Positives = 15/46 (32%), Gaps = 4/46 (8%)
Frame = +1
Query: 517 PPXXPX*XPPPP----PPPPLXXXRXXPPPXTRRSXXPXXPPPHXP 642
PP PPPP PPPP PP P P P
Sbjct: 1699 PPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLPASSAPSVP 1744
Score = 25.8 bits (54), Expect = 8.9
Identities = 16/47 (34%), Positives = 17/47 (36%), Gaps = 2/47 (4%)
Frame = +2
Query: 470 RPXXXXAPXAXXPXXXXRPXPXXXPPPPLPPX--SXXPXHXPPPXXA 604
RP P P P P PPPP P + P PPP A
Sbjct: 1693 RPQSAAPPQMSAPTPP--PPPMSVPPPPSAPPMPAGPPSAPPPPLPA 1737
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 32.3 bits (70), Expect = 0.10
Identities = 26/82 (31%), Positives = 27/82 (32%), Gaps = 3/82 (3%)
Frame = -3
Query: 588 GXXXGXXEXGGRGGGGXSXGXGRXXXXGXXAXGAXXXXGRGFXXGXXXXX---PXXGGGG 418
G G G G GG G G G G G G P GGG
Sbjct: 184 GHNGGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGG 243
Query: 417 XLGXXGGVVGXGGXXXPXXFGG 352
G GG+ G GG P FGG
Sbjct: 244 PGGFGGGLGGFGG--GPGGFGG 263
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 31.9 bits (69), Expect = 0.14
Identities = 12/29 (41%), Positives = 14/29 (48%)
Frame = +1
Query: 547 PPPPPPLXXXRXXPPPXTRRSXXPXXPPP 633
PPPPPP+ + PP S P PP
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPP 1910
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 31.9 bits (69), Expect = 0.14
Identities = 22/77 (28%), Positives = 23/77 (29%), Gaps = 2/77 (2%)
Frame = +2
Query: 380 PPXPTTPPXXPKXPPPPXXGXXXXXPXXK--PRPXXXXAPXAXXPXXXXRPXPXXXPPPP 553
PP P P P P P P P P AP P P P PP
Sbjct: 1083 PPVPA-PSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPP 1141
Query: 554 LPPXSXXPXHXPPPXXA 604
+P S P P A
Sbjct: 1142 VPKPSVAAPPVPAPSGA 1158
Score = 29.5 bits (63), Expect = 0.72
Identities = 25/92 (27%), Positives = 26/92 (28%), Gaps = 11/92 (11%)
Frame = +2
Query: 353 PPKXKGXXXPPXP----TTPPXX-PKXPPPPXXGXXXXXPXXKPR------PXXXXAPXA 499
PP PP P PP P PP P KP P AP
Sbjct: 1083 PPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPV 1142
Query: 500 XXPXXXXRPXPXXXPPPPLPPXSXXPXHXPPP 595
P P P PP+P S P P
Sbjct: 1143 PKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAP 1174
Score = 29.5 bits (63), Expect = 0.72
Identities = 23/83 (27%), Positives = 25/83 (30%), Gaps = 5/83 (6%)
Frame = +1
Query: 400 PXXPQAPPAXXGGXGXPRXXXKTXPXXGXSPAGXXAXXXPPXXPX*XPPPPPP-----PP 564
P APP P P G P A PP P PP P PP
Sbjct: 1153 PAPSGAPPVPKPSVAAPPVPA---PSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPP 1209
Query: 565 LXXXRXXPPPXTRRSXXPXXPPP 633
+ PP T + P P P
Sbjct: 1210 VPPPSTAPPVPTPSAGLPPVPVP 1232
Score = 28.3 bits (60), Expect = 1.7
Identities = 26/89 (29%), Positives = 28/89 (31%), Gaps = 2/89 (2%)
Frame = +2
Query: 344 TXXPPKXKGXXXP--PXPTTPPXXPKXPPPPXXGXXXXXPXXKPRPXXXXAPXAXXPXXX 517
T PPK P +T P P PP P P P AP P
Sbjct: 983 TSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPV-PLPSAD-APPIPVPSTA 1040
Query: 518 XRPXPXXXPPPPLPPXSXXPXHXPPPXXA 604
P P PP+P S PPP A
Sbjct: 1041 P-PVPIPTSTPPVPKSSSGAPSAPPPVPA 1068
Score = 28.3 bits (60), Expect = 1.7
Identities = 24/84 (28%), Positives = 24/84 (28%)
Frame = +2
Query: 353 PPKXKGXXXPPXPTTPPXXPKXPPPPXXGXXXXXPXXKPRPXXXXAPXAXXPXXXXRPXP 532
PP K P P P P P P P P A P P P
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPP--VPKPAAGVPPV---PPP 1194
Query: 533 XXXPPPPLPPXSXXPXHXPPPXXA 604
PP P P P PPP A
Sbjct: 1195 SEAPPVPKPSVGVPP--VPPPSTA 1216
Score = 27.9 bits (59), Expect = 2.2
Identities = 21/83 (25%), Positives = 23/83 (27%), Gaps = 5/83 (6%)
Frame = +1
Query: 400 PXXPQAPPAXXGGXGXPRXXXKTXPXXGXSPAGXXAXXXPPXX-PX*XPPPPPP----PP 564
P PP G P P+ PP P PP P P PP
Sbjct: 1044 PIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPP 1103
Query: 565 LXXXRXXPPPXTRRSXXPXXPPP 633
+ PP S P P P
Sbjct: 1104 VPKPSVAVPPVPAPSGAPPVPKP 1126
Score = 26.6 bits (56), Expect = 5.1
Identities = 19/80 (23%), Positives = 22/80 (27%)
Frame = +1
Query: 394 HPPXXPQAPPAXXGGXGXPRXXXKTXPXXGXSPAGXXAXXXPPXXPX*XPPPPPPPPLXX 573
HPP P + P P P + P P P PP+
Sbjct: 990 HPPSAPLSKPVSTS----PAAPLARVPPVPKLSSKAPPVPLPSADAPPIPVPSTAPPVPI 1045
Query: 574 XRXXPPPXTRRSXXPXXPPP 633
PP S P PPP
Sbjct: 1046 PTSTPPVPKSSSGAPSAPPP 1065
Score = 26.6 bits (56), Expect = 5.1
Identities = 18/79 (22%), Positives = 22/79 (27%)
Frame = +1
Query: 397 PPXXPQAPPAXXGGXGXPRXXXKTXPXXGXSPAGXXAXXXPPXXPX*XPPPPPPPPLXXX 576
P P P P+ P +P+G P P P PP+
Sbjct: 1088 PSGIPPVPKPSVAAPPVPKPSVAVPPVP--APSGAPPVPKPSVAAPPVPVPSGAPPVPKP 1145
Query: 577 RXXPPPXTRRSXXPXXPPP 633
PP S P P P
Sbjct: 1146 SVAAPPVPAPSGAPPVPKP 1164
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 31.1 bits (67), Expect = 0.24
Identities = 12/22 (54%), Positives = 12/22 (54%)
Frame = +1
Query: 529 PX*XPPPPPPPPLXXXRXXPPP 594
P PPPPPPPP PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPP 26
Score = 31.1 bits (67), Expect = 0.24
Identities = 12/26 (46%), Positives = 12/26 (46%)
Frame = +2
Query: 530 PXXXPPPPLPPXSXXPXHXPPPXXAG 607
P PPPP PP P PPP G
Sbjct: 6 PGNPPPPPPPPGFEPPSQPPPPPPPG 31
Score = 27.5 bits (58), Expect = 2.9
Identities = 11/26 (42%), Positives = 11/26 (42%)
Frame = +2
Query: 353 PPKXKGXXXPPXPTTPPXXPKXPPPP 430
PP PP PP P PPPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPP 30
Score = 27.1 bits (57), Expect = 3.8
Identities = 14/37 (37%), Positives = 14/37 (37%), Gaps = 2/37 (5%)
Frame = +1
Query: 490 PAGXXAXXXPPXX--PX*XPPPPPPPPLXXXRXXPPP 594
P G PP P PPPPPPP R P
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPPPGYVKKRKNKTP 41
Score = 26.2 bits (55), Expect = 6.7
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +1
Query: 541 PPPPPPPPLXXXRXXPPPXTRRSXXPXXPPP 633
PP PPPP PPP P PPP
Sbjct: 5 PPGNPPPP------PPPPGFEPPSQPPPPPP 29
>SPAPJ760.02c |app1||App1 protein|Schizosaccharomyces pombe|chr
1|||Manual
Length = 857
Score = 28.7 bits (61), Expect = 1.3
Identities = 20/79 (25%), Positives = 22/79 (27%), Gaps = 4/79 (5%)
Frame = +2
Query: 380 PPXPTTPPXXPKXPPPPXXGXXXXXPXXKPRPXXXXAPXA----XXPXXXXRPXPXXXPP 547
PP P P PP P RP P A P P P
Sbjct: 517 PPAAPVVPEAPSVHQPPAAPVAPEVPSAPQRPAAPVVPEAPSVPQRPAVPVVPEALSVPQ 576
Query: 548 PPLPPXSXXPXHXPPPXXA 604
PP+ P + P P A
Sbjct: 577 PPVAPVAPEVPSVPQPPVA 595
Score = 28.3 bits (60), Expect = 1.7
Identities = 19/79 (24%), Positives = 21/79 (26%), Gaps = 1/79 (1%)
Frame = +2
Query: 356 PKXKGXXXPPXPTTPPXXPKXPPPPXXGXXXXXPXXKPRPXXXXAPXA-XXPXXXXRPXP 532
P+ PP P P P PP P P AP P P
Sbjct: 569 PEALSVPQPPVAPVAPEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAVPVV 628
Query: 533 XXXPPPPLPPXSXXPXHXP 589
P P PP + P
Sbjct: 629 PEAPSVPQPPAAPVVPEVP 647
Score = 27.9 bits (59), Expect = 2.2
Identities = 18/69 (26%), Positives = 19/69 (27%)
Frame = +2
Query: 356 PKXKGXXXPPXPTTPPXXPKXPPPPXXGXXXXXPXXKPRPXXXXAPXAXXPXXXXRPXPX 535
P+ PP P P P PP P RP P A P P
Sbjct: 584 PEVPSVPQPPVAPVVPEAPSVPQPPVAPVAPEVPSVPQRPAVPVVPEA--PSVPQPPAAP 641
Query: 536 XXPPPPLPP 562
P P P
Sbjct: 642 VVPEVPSVP 650
>SPAC1F5.04c |cdc12||formin Cdc12|Schizosaccharomyces pombe|chr
1|||Manual
Length = 1841
Score = 28.7 bits (61), Expect = 1.3
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = +1
Query: 529 PX*XPPPPPPPPL 567
P PPPPPPPPL
Sbjct: 942 PAFPPPPPPPPPL 954
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.3 bits (60), Expect = 1.7
Identities = 22/76 (28%), Positives = 23/76 (30%), Gaps = 1/76 (1%)
Frame = +1
Query: 394 HPPXXPQAPPAXXGGXGXPRXXXKTXPXX-GXSPAGXXAXXXPPXXPX*XPPPPPPPPLX 570
+PP P PPA SP P PPPPPPP L
Sbjct: 188 NPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAPPPPPPPTL- 246
Query: 571 XXRXXPPPXTRRSXXP 618
PP T S P
Sbjct: 247 -----PPQSTNTSQLP 257
Score = 27.5 bits (58), Expect = 2.9
Identities = 11/24 (45%), Positives = 11/24 (45%)
Frame = +2
Query: 524 PXPXXXPPPPLPPXSXXPXHXPPP 595
P P PPP LPP S P P
Sbjct: 236 PAPPPPPPPTLPPQSTNTSQLPMP 259
Score = 25.8 bits (54), Expect = 8.9
Identities = 13/45 (28%), Positives = 16/45 (35%), Gaps = 1/45 (2%)
Frame = +2
Query: 464 KPRPXXXXAPXAXXPXXXXRPXPXXXPPPPLPPXSXXP-XHXPPP 595
+P AP P P P PP P + P + PPP
Sbjct: 147 EPSASGVNAPTVSAPNSMVSPPPSFQPPSAAAPATSLPSDYNPPP 191
>SPAC30D11.14c |||RNA-binding protein |Schizosaccharomyces pombe|chr
1|||Manual
Length = 534
Score = 27.5 bits (58), Expect = 2.9
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +2
Query: 530 PXXXPPPPLPPXSXXPXHXPPPXXA 604
P P PPLPP S P PP A
Sbjct: 129 PPSAPAPPLPPSSEGPAVDIPPSMA 153
>SPAC26A3.09c |rga2||GTPase activating protein
Rga2|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1275
Score = 24.2 bits (50), Expect(2) = 3.6
Identities = 9/23 (39%), Positives = 11/23 (47%)
Frame = +1
Query: 550 PPPPPLXXXRXXPPPXTRRSXXP 618
PPPPP+ P P + S P
Sbjct: 419 PPPPPISSSSTTPRPDDKPSLPP 441
Score = 21.0 bits (42), Expect(2) = 3.6
Identities = 8/23 (34%), Positives = 9/23 (39%)
Frame = +1
Query: 487 SPAGXXAXXXPPXXPX*XPPPPP 555
+P P P PPPPP
Sbjct: 401 APTSNVPAYSTPARPTESPPPPP 423
>SPBC146.13c |myo1||myosin type I|Schizosaccharomyces pombe|chr
2|||Manual
Length = 1217
Score = 27.1 bits (57), Expect = 3.8
Identities = 9/12 (75%), Positives = 9/12 (75%)
Frame = +1
Query: 529 PX*XPPPPPPPP 564
P PPPPPPPP
Sbjct: 1091 PSAVPPPPPPPP 1102
>SPCC306.09c |cap1|cap|adenylyl cyclase-associated protein
Cap1|Schizosaccharomyces pombe|chr 3|||Manual
Length = 551
Score = 26.6 bits (56), Expect = 5.1
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 541 PPPPPPPP 564
PPPPPPPP
Sbjct: 306 PPPPPPPP 313
Score = 26.6 bits (56), Expect = 5.1
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 541 PPPPPPPP 564
PPPPPPPP
Sbjct: 307 PPPPPPPP 314
>SPAC140.02 |gar2||GAR family|Schizosaccharomyces pombe|chr
1|||Manual
Length = 500
Score = 26.6 bits (56), Expect = 5.1
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 594 GGGXXXGXXEXGGRGGGGXSXGXG 523
GGG G GGRGG G G G
Sbjct: 446 GGGSRGGRGGFGGRGGFGGRGGFG 469
Score = 26.2 bits (55), Expect = 6.7
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = -3
Query: 426 GGGXLGXXGGVVGXGGXXXPXXFGG 352
GGG G GG G GG FGG
Sbjct: 446 GGGSRGGRGGFGGRGGFGGRGGFGG 470
>SPBC13E7.03c |||RNA hairpin binding protein |Schizosaccharomyces
pombe|chr 2|||Manual
Length = 713
Score = 26.6 bits (56), Expect = 5.1
Identities = 8/8 (100%), Positives = 8/8 (100%)
Frame = +1
Query: 541 PPPPPPPP 564
PPPPPPPP
Sbjct: 370 PPPPPPPP 377
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 25.8 bits (54), Expect = 8.9
Identities = 23/69 (33%), Positives = 23/69 (33%)
Frame = -3
Query: 594 GGGXXXGXXEXGGRGGGGXSXGXGRXXXXGXXAXGAXXXXGRGFXXGXXXXXPXXGGGGX 415
GG GGRGG G G R G G GRG G G GG
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGG---RGGRGGARG--------GRGGS 60
Query: 414 LGXXGGVVG 388
G GG G
Sbjct: 61 SGGRGGAKG 69
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 1,447,668
Number of Sequences: 5004
Number of extensions: 17761
Number of successful extensions: 475
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 60
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 280
length of database: 2,362,478
effective HSP length: 73
effective length of database: 1,997,186
effective search space used: 481321826
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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