Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_K06
         (944 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor pr...    27   0.33 
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    25   1.00 
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    25   1.00 
AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.       24   2.3  
DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chlor...    23   3.0  
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.              23   3.0  
X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor pro...    23   4.0  

>AY937243-1|AAX33677.1| 1370|Apis mellifera Toll-like receptor
            protein.
          Length = 1370

 Score = 26.6 bits (56), Expect = 0.33
 Identities = 8/8 (100%), Positives = 8/8 (100%)
 Frame = +1

Query: 541  PPPPPPPP 564
            PPPPPPPP
Sbjct: 1355 PPPPPPPP 1362



 Score = 23.0 bits (47), Expect = 4.0
 Identities = 7/10 (70%), Positives = 8/10 (80%)
 Frame = +1

Query: 784  PPPPPPXXGR 813
            PPPPPP  G+
Sbjct: 1357 PPPPPPSSGQ 1366


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 25.0 bits (52), Expect = 1.00
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -3

Query: 429  GGGGXLGXXGGVVGXGG 379
            GGGG L   GG+ G GG
Sbjct: 1705 GGGGSLAGLGGLGGLGG 1721


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 25.0 bits (52), Expect = 1.00
 Identities = 10/17 (58%), Positives = 11/17 (64%)
 Frame = -3

Query: 429  GGGGXLGXXGGVVGXGG 379
            GGGG L   GG+ G GG
Sbjct: 1701 GGGGSLAGLGGLGGLGG 1717


>AB270697-1|BAF75928.1|  735|Apis mellifera FoxP protein protein.
          Length = 735

 Score = 23.8 bits (49), Expect = 2.3
 Identities = 12/32 (37%), Positives = 14/32 (43%)
 Frame = +2

Query: 467 PRPXXXXAPXAXXPXXXXRPXPXXXPPPPLPP 562
           P+P    +P A  P     P P   PPP  PP
Sbjct: 23  PQPSPHQSPQA--PQRGSPPNPSQGPPPGGPP 52


>DQ667187-1|ABG75739.1|  428|Apis mellifera histamine-gated chloride
           channel protein.
          Length = 428

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +1

Query: 541 PPPPPPPP 564
           P PPPPPP
Sbjct: 341 PAPPPPPP 348


>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
          Length = 1946

 Score = 23.4 bits (48), Expect = 3.0
 Identities = 7/8 (87%), Positives = 7/8 (87%)
 Frame = +1

Query: 541  PPPPPPPP 564
            P PPPPPP
Sbjct: 1857 PEPPPPPP 1864



 Score = 21.8 bits (44), Expect = 9.3
 Identities = 8/12 (66%), Positives = 8/12 (66%)
 Frame = +1

Query: 628  PPHXPQXTXTNT 663
            PPH PQ T T T
Sbjct: 1366 PPHSPQITLTAT 1377


>X72575-1|CAA51167.1|  168|Apis mellifera Apidaecin precursor
           protein.
          Length = 168

 Score = 23.0 bits (47), Expect = 4.0
 Identities = 21/83 (25%), Positives = 24/83 (28%), Gaps = 2/83 (2%)
 Frame = +1

Query: 394 HPPXXPQAPPAXXGGXGXPRXXXKTXPXXGXSPAGXXAXXXPPXX-PX*XPPPPPP-PPL 567
           HP    +A P    G   P    +  P          +   P    P   P P PP P L
Sbjct: 57  HPRLRREAEPKAEPGNNRPIYIPQPRPPHPRLRREAESEAEPGNNRPVYIPQPRPPHPRL 116

Query: 568 XXXRXXPPPXTRRSXXPXXPPPH 636
                  P   R    P   PPH
Sbjct: 117 RREPEAEPGNNRPVYIPQPRPPH 139



 Score = 22.6 bits (46), Expect = 5.3
 Identities = 11/31 (35%), Positives = 11/31 (35%)
 Frame = +1

Query: 544 PPPPPPPLXXXRXXPPPXTRRSXXPXXPPPH 636
           P PP P L       P   R    P   PPH
Sbjct: 135 PRPPHPRLRREPEAEPGNNRPVYIPQPRPPH 165


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 149,604
Number of Sequences: 438
Number of extensions: 4510
Number of successful extensions: 37
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 30960384
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)