Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_K05
(885 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
07_01_1201 - 11419851-11419913,11420090-11420311 35 0.075
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943... 33 0.23
04_03_0380 - 15150814-15152304 33 0.30
04_03_0348 + 14735581-14737071 33 0.30
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 33 0.40
10_02_0157 - 5954439-5954801,5956244-5956270,5956465-5956526,595... 31 1.6
05_03_0045 + 7752571-7752599,7754013-7754078,7754228-7754228,775... 31 1.6
09_04_0609 - 18929600-18929646,18929753-18929924,18930304-189304... 30 2.1
07_03_1432 - 26508135-26508881,26509301-26509708 30 2.8
06_01_0486 - 3455030-3455770 29 3.8
04_04_0233 + 23801944-23802598,23802914-23803047,23803548-238037... 29 3.8
11_06_0368 + 22756988-22758205 29 5.0
01_06_1321 + 36280691-36281269 29 6.6
01_01_0070 - 542603-542686,542803-543441 29 6.6
10_08_0940 - 21708557-21708733,21709058-21709142,21709330-217095... 28 8.7
>07_01_1201 - 11419851-11419913,11420090-11420311
Length = 94
Score = 35.1 bits (77), Expect = 0.075
Identities = 21/58 (36%), Positives = 25/58 (43%), Gaps = 2/58 (3%)
Frame = +2
Query: 539 LRPPDEHHKNRRSSQRWRN--PTGL*RYQAFPPGKLPRALSCSDPAAYRNTCPPFSPS 706
L PP Q+WR+ PTG + +FP G LP A PA R P PS
Sbjct: 13 LLPPPPPLPALPQGQQWRSTGPTGKLCFCSFPAGALPPAAGAGQPAPDRQPATPLFPS 70
>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
9435445-9435526,9435610-9435660,9435749-9435829,
9435965-9436006,9436117-9436215,9438130-9438201,
9438557-9438680,9438850-9439723,9440274-9440456,
9440941-9442741,9442825-9443049,9443117-9443814,
9444519-9444591
Length = 1541
Score = 33.5 bits (73), Expect = 0.23
Identities = 29/83 (34%), Positives = 33/83 (39%)
Frame = +2
Query: 626 PPGKLPRALSCSDPAAYRNTCPPFSPSGSVAPFSXLPPGRYLSSV*VVPPQXGAVLPXNP 805
P G L + PA +R PP + G VAP PP R V P GA P P
Sbjct: 1153 PVGGLGGPPAPPPPAGFRGGTPPPNAHGGVAP--PPPPPRGHGGVGGPPTPPGAPAPPMP 1210
Query: 806 PVXTPDRLAPYPGNYXSLXSNPG 874
P P P PG L + PG
Sbjct: 1211 P-GVPGGPPPPPGG-RGLPAPPG 1231
>04_03_0380 - 15150814-15152304
Length = 496
Score = 33.1 bits (72), Expect = 0.30
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = -1
Query: 705 EGEKGGQVFR*AAGSEQESARGSXPGGNA 619
EGEKG ++ R AAG ++ +AR + PGG A
Sbjct: 444 EGEKGAEMRRRAAGWKEAAARAARPGGPA 472
>04_03_0348 + 14735581-14737071
Length = 496
Score = 33.1 bits (72), Expect = 0.30
Identities = 15/29 (51%), Positives = 21/29 (72%)
Frame = -1
Query: 705 EGEKGGQVFR*AAGSEQESARGSXPGGNA 619
EGEKG ++ R AAG ++ +AR + PGG A
Sbjct: 444 EGEKGAEMRRRAAGWKEAAARAARPGGPA 472
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 32.7 bits (71), Expect = 0.40
Identities = 27/72 (37%), Positives = 29/72 (40%)
Frame = +2
Query: 626 PPGKLPRALSCSDPAAYRNTCPPFSPSGSVAPFSXLPPGRYLSSV*VVPPQXGAVLPXNP 805
PP LP L S P PP P+ SV P PP SV PP P P
Sbjct: 590 PPPPLPNCLVPSPPPP--PPPPPILPNRSVPPPPPPPPPLPNHSVLPPPP------PPPP 641
Query: 806 PVXTPDRLAPYP 841
P P+RL P P
Sbjct: 642 PPSLPNRLVPPP 653
>10_02_0157 -
5954439-5954801,5956244-5956270,5956465-5956526,
5956971-5957592
Length = 357
Score = 30.7 bits (66), Expect = 1.6
Identities = 24/75 (32%), Positives = 29/75 (38%), Gaps = 3/75 (4%)
Frame = +2
Query: 626 PPGKLPRALSCSDPAAYRNTCPPFS---PSGSVAPFSXLPPGRYLSSV*VVPPQXGAVLP 796
PP +P +L + P A PP P VAP LPP +VPP P
Sbjct: 27 PPAVVPPSLPTTTPPAPTVVAPPLPTTPPPAVVAPSPPLPP--LTPPPAIVPPALPPPPP 84
Query: 797 XNPPVXTPDRLAPYP 841
P + P L P P
Sbjct: 85 L-PAIVVPPALPPTP 98
>05_03_0045 +
7752571-7752599,7754013-7754078,7754228-7754228,
7757535-7758380
Length = 313
Score = 30.7 bits (66), Expect = 1.6
Identities = 18/56 (32%), Positives = 24/56 (42%)
Frame = +2
Query: 668 AAYRNTCPPFSPSGSVAPFSXLPPGRYLSSV*VVPPQXGAVLPXNPPVXTPDRLAP 835
A ++NT P F P G P+ L G + P Q AV+ V P +AP
Sbjct: 211 AKHQNTGPVFLPGGVFPPYRNLVTGNQHHTTNTPPVQPTAVVQPTAVVSVPAPVAP 266
>09_04_0609 -
18929600-18929646,18929753-18929924,18930304-18930498,
18930691-18930801,18930885-18931097,18931643-18931720,
18931894-18932001,18932175-18932316,18932413-18933761,
18934492-18935121
Length = 1014
Score = 30.3 bits (65), Expect = 2.1
Identities = 23/71 (32%), Positives = 28/71 (39%)
Frame = +2
Query: 545 PPDEHHKNRRSSQRWRNPTGL*RYQAFPPGKLPRALSCSDPAAYRNTCPPFSPSGSVAPF 724
PPD H +RS + R P P P SCSD + C +PS +V P
Sbjct: 261 PPDAH---QRSPRPIRTPVSTKLTSDSLPASSPPTSSCSDYSTITEACQQRNPSMAVKPG 317
Query: 725 SXLPPGRYLSS 757
P G L S
Sbjct: 318 E--PVGTMLDS 326
>07_03_1432 - 26508135-26508881,26509301-26509708
Length = 384
Score = 29.9 bits (64), Expect = 2.8
Identities = 21/55 (38%), Positives = 23/55 (41%)
Frame = +2
Query: 641 PRALSCSDPAAYRNTCPPFSPSGSVAPFSXLPPGRYLSSV*VVPPQXGAVLPXNP 805
P +LS S P Y PP S S+AP S PP YL PP P P
Sbjct: 37 PPSLSPSTPPTYP---PPSSTPPSLAPVSPSPPTTYLPPS-PTPPSPAPASPSPP 87
>06_01_0486 - 3455030-3455770
Length = 246
Score = 29.5 bits (63), Expect = 3.8
Identities = 23/85 (27%), Positives = 29/85 (34%)
Frame = +2
Query: 629 PGKLPRALSCSDPAAYRNTCPPFSPSGSVAPFSXLPPGRYLSSV*VVPPQXGAVLPXNPP 808
P PR SC P PP +P +P +PP Y+ PP +P P
Sbjct: 66 PPPSPRCPSCHPPYTPPTPRPPPTPPYVPSPPPYVPP--YIPP--PTPPYVPPYIPPPTP 121
Query: 809 VXTPDRLAPYPGNYXSLXSNPGKXP 883
P P P Y + P P
Sbjct: 122 PYVPPPTPPSPPPYVPPPTPPSPPP 146
Score = 28.3 bits (60), Expect = 8.7
Identities = 31/113 (27%), Positives = 41/113 (36%)
Frame = +2
Query: 533 HRLRPPDEHHKNRRSSQRWRNPTGL*RYQAFPPGKLPRALSCSDPAAYRNTCPPFSPSGS 712
H +PP EHH + + R P+ Y P P P Y PP+ P +
Sbjct: 53 HHGKPP-EHHHHHKPPPSPRCPSCHPPYTPPTPRPPPTPPYVPSPPPY---VPPYIPPPT 108
Query: 713 VAPFSXLPPGRYLSSV*VVPPQXGAVLPXNPPVXTPDRLAPYPGNYXSLXSNP 871
P+ +PP Y+ PP P +PP P P P Y S P
Sbjct: 109 -PPY--VPP--YIPPP--TPPYVPPPTPPSPPPYVPPPTPPSPPPYVPPPSPP 154
>04_04_0233 +
23801944-23802598,23802914-23803047,23803548-23803730,
23804145-23804318
Length = 381
Score = 29.5 bits (63), Expect = 3.8
Identities = 22/65 (33%), Positives = 29/65 (44%)
Frame = +2
Query: 545 PPDEHHKNRRSSQRWRNPTGL*RYQAFPPGKLPRALSCSDPAAYRNTCPPFSPSGSVAPF 724
PP HH +RR + + P + Q PP LP +PAA +G+ A F
Sbjct: 40 PPHHHHHHRRRHRHSKKPKPQPQPQP-PPPPLPPQQQQQEPAA---------GAGAGADF 89
Query: 725 SXLPP 739
S LPP
Sbjct: 90 SALPP 94
>11_06_0368 + 22756988-22758205
Length = 405
Score = 29.1 bits (62), Expect = 5.0
Identities = 21/59 (35%), Positives = 25/59 (42%)
Frame = +2
Query: 545 PPDEHHKNRRSSQRWRNPTGL*RYQAFPPGKLPRALSCSDPAAYRNTCPPFSPSGSVAP 721
P E N RS+ R+ T Y PP L A CS + + CP SP VAP
Sbjct: 25 PKPEPEPNTRSAPE-RDQTAA-PYGTVPPDPLSCATDCSPDCVFYHLCP--SPPPPVAP 79
>01_06_1321 + 36280691-36281269
Length = 192
Score = 28.7 bits (61), Expect = 6.6
Identities = 16/45 (35%), Positives = 18/45 (40%)
Frame = +2
Query: 689 PPFSPSGSVAPFSXLPPGRYLSSV*VVPPQXGAVLPXNPPVXTPD 823
PP SP P LPP Y+ PP A +PP T D
Sbjct: 143 PPPSPPPPPPPPPPLPPAMYVPCFAAKPPLDAANRSDSPPSRTSD 187
>01_01_0070 - 542603-542686,542803-543441
Length = 240
Score = 28.7 bits (61), Expect = 6.6
Identities = 17/53 (32%), Positives = 20/53 (37%)
Frame = +2
Query: 683 TCPPFSPSGSVAPFSXLPPGRYLSSV*VVPPQXGAVLPXNPPVXTPDRLAPYP 841
T P SP P P ++ PP AV P PP TP + P P
Sbjct: 43 TAPAKSPPAPATPAPTATPTPPVAPA-KAPPVAPAVAPVTPPPPTPKKAPPPP 94
>10_08_0940 -
21708557-21708733,21709058-21709142,21709330-21709551,
21710640-21710815,21711883-21711946,21712433-21712507,
21715114-21715199,21715297-21716715
Length = 767
Score = 28.3 bits (60), Expect = 8.7
Identities = 15/31 (48%), Positives = 20/31 (64%), Gaps = 3/31 (9%)
Frame = +2
Query: 299 NESAN---ARGEAVCVLGALPLPRSLTRCAR 382
+ESAN AR EAV +G +P+ L RC+R
Sbjct: 434 DESANVDAARSEAVMRVGGIPMLLDLARCSR 464
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 23,846,740
Number of Sequences: 37544
Number of extensions: 556055
Number of successful extensions: 1819
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 1688
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1811
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2503236492
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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