BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_K05
(885 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
DQ182013-1|ABA56305.1| 75|Anopheles gambiae G(alpha)c protein. 26 1.3
AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic acetylch... 26 1.8
DQ004399-1|AAY21238.1| 847|Anopheles gambiae lysozyme c-6 protein. 24 5.4
AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha ... 24 5.4
DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein. 24 7.1
AY745217-1|AAU93484.1| 98|Anopheles gambiae cytochrome P450 pr... 24 7.1
AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic acetylch... 24 7.1
AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein. 24 7.1
AJ419878-1|CAD12038.1| 77|Anopheles gambiae Sec61 protein prot... 23 9.4
>DQ182013-1|ABA56305.1| 75|Anopheles gambiae G(alpha)c protein.
Length = 75
Score = 26.2 bits (55), Expect = 1.3
Identities = 11/31 (35%), Positives = 16/31 (51%)
Frame = +2
Query: 113 YIDEFGQTTTRMQ*KKCFICEICDAIALFVT 205
++D GQ T R + KCF C + + L T
Sbjct: 13 FVDVGGQRTQRQKWTKCFDCSVTSILFLVST 43
>AY705405-1|AAU12514.1| 519|Anopheles gambiae nicotinic
acetylcholine receptor subunitbeta 1 protein.
Length = 519
Score = 25.8 bits (54), Expect = 1.8
Identities = 13/28 (46%), Positives = 19/28 (67%)
Frame = -3
Query: 475 SHVLSCVIPLILWITVLPPLSELIPLAA 392
S +LS V+ L+L +LPP S ++PL A
Sbjct: 269 SILLSLVVFLLLVSKILPPTSLVLPLIA 296
>DQ004399-1|AAY21238.1| 847|Anopheles gambiae lysozyme c-6 protein.
Length = 847
Score = 24.2 bits (50), Expect = 5.4
Identities = 10/19 (52%), Positives = 12/19 (63%)
Frame = -1
Query: 657 QESARGSXPGGNAWYLYSP 601
+E AR S G NAW +Y P
Sbjct: 595 EEHARISGDGYNAWAVYQP 613
>AF313909-1|AAL99382.1| 1024|Anopheles gambiae collagen IV alpha 1
chain protein.
Length = 1024
Score = 24.2 bits (50), Expect = 5.4
Identities = 10/20 (50%), Positives = 13/20 (65%)
Frame = -1
Query: 744 LPGGXYEKGATLPEGEKGGQ 685
LPG ++G P+GEKG Q
Sbjct: 613 LPGPQGQRGLPGPQGEKGDQ 632
>DQ655702-1|ABG45862.1| 889|Anopheles gambiae Jxc1 protein.
Length = 889
Score = 23.8 bits (49), Expect = 7.1
Identities = 10/22 (45%), Positives = 12/22 (54%)
Frame = +1
Query: 772 PPXWGCVAPKPPRFXPRPVGPL 837
PP G V PP+F P P+ L
Sbjct: 534 PPPGGAVLNIPPQFLPPPLNLL 555
>AY745217-1|AAU93484.1| 98|Anopheles gambiae cytochrome P450
protein.
Length = 98
Score = 23.8 bits (49), Expect = 7.1
Identities = 10/35 (28%), Positives = 20/35 (57%)
Frame = +3
Query: 606 YKDTRRFPLXSSLVRSPVPTLPLTGIPVRLSPLRE 710
Y+D + L ++ + LP+TG+ R +P++E
Sbjct: 11 YEDLTKLTLLEMFLKETMRLLPITGLIAR-TPMKE 44
>AY705394-1|AAU12503.1| 557|Anopheles gambiae nicotinic
acetylcholine receptor subunitalpha 1 protein.
Length = 557
Score = 23.8 bits (49), Expect = 7.1
Identities = 10/25 (40%), Positives = 15/25 (60%)
Frame = -2
Query: 506 YGSWPFAGLLLTCSFLRYPPDSVDN 432
+GSW + G ++ L+ PDS DN
Sbjct: 166 FGSWTYDGYMVDLRHLQQTPDS-DN 189
>AF444781-1|AAL37902.1| 1459|Anopheles gambiae Toll6 protein.
Length = 1459
Score = 23.8 bits (49), Expect = 7.1
Identities = 11/17 (64%), Positives = 12/17 (70%)
Frame = -3
Query: 193 SNSITNFTNKAFFSLHS 143
SN+I NFT KAF L S
Sbjct: 520 SNNIENFTRKAFKDLPS 536
>AJ419878-1|CAD12038.1| 77|Anopheles gambiae Sec61 protein
protein.
Length = 77
Score = 23.4 bits (48), Expect = 9.4
Identities = 10/32 (31%), Positives = 17/32 (53%)
Frame = +1
Query: 583 EVAKPDRTIKIPGVSPWXAPSCALLFRPCRLP 678
E+AKP+R I+ W A + + C++P
Sbjct: 18 EIAKPERKIQFREKVLWTAITLFIFLVCCQIP 49
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 849,197
Number of Sequences: 2352
Number of extensions: 17719
Number of successful extensions: 34
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 29
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 34
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95093730
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -