Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_K05
         (885 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z83219-3|CAD57687.1|  965|Caenorhabditis elegans Hypothetical pr...    31   1.1  
U52002-3|AAL02476.1| 1306|Caenorhabditis elegans Cadherin family...    31   1.4  
U10438-9|AAU87834.1|  616|Caenorhabditis elegans Hypothetical pr...    31   1.4  
Z68338-7|CAA92756.2|  866|Caenorhabditis elegans Hypothetical pr...    30   2.5  
Z80215-14|CAI79138.1|  662|Caenorhabditis elegans Hypothetical p...    29   3.3  
Z80215-13|CAI79137.1|  640|Caenorhabditis elegans Hypothetical p...    29   3.3  
Z80215-12|CAB02277.1|  652|Caenorhabditis elegans Hypothetical p...    29   3.3  
Z83102-3|CAB05466.1|  399|Caenorhabditis elegans Hypothetical pr...    28   7.7  
AF040660-8|AAN65288.1|  594|Caenorhabditis elegans Hypothetical ...    28   7.7  
AF040660-6|AAN65286.1|  541|Caenorhabditis elegans Hypothetical ...    28   7.7  
AF040660-5|AAC71149.1|  651|Caenorhabditis elegans Hypothetical ...    28   7.7  
AC006729-6|AAF60464.1|  282|Caenorhabditis elegans Hypothetical ...    28   7.7  

>Z83219-3|CAD57687.1|  965|Caenorhabditis elegans Hypothetical
           protein C31C9.6 protein.
          Length = 965

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 5/77 (6%)
 Frame = +2

Query: 626 PPGKLPRALS--CSDPAAYRNTCPPFSPSGSVAPFSXLP---PGRYLSSV*VVPPQXGAV 790
           PP   P  +    S   +Y +T PP +P  +  P S +P   P    + V   PP     
Sbjct: 436 PPPSAPPTIKFPISTGTSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPP--- 492

Query: 791 LPXNPPVXTPDRLAPYP 841
            P  PP+ TP  + P P
Sbjct: 493 -PPLPPIATPSSVPPPP 508


>U52002-3|AAL02476.1| 1306|Caenorhabditis elegans Cadherin family
           protein 5, isoformb protein.
          Length = 1306

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 26/96 (27%), Positives = 43/96 (44%)
 Frame = +2

Query: 548 PDEHHKNRRSSQRWRNPTGL*RYQAFPPGKLPRALSCSDPAAYRNTCPPFSPSGSVAPFS 727
           PDEH +   +S   +N      + +FP  ++ +  +  +P       P F    +++P  
Sbjct: 471 PDEHLQTVTTSPSTKNQVSQQIFSSFPAPQVEQTGAPVEPEF-----PQFPTFPTLSPHP 525

Query: 728 XLPPGRYLSSV*VVPPQXGAVLPXNPPVXTPDRLAP 835
              P   L +  + PPQ   V   +PP+ TP RLAP
Sbjct: 526 QELPS--LPTTKMAPPQP--VPTQSPPLPTPKRLAP 557


>U10438-9|AAU87834.1|  616|Caenorhabditis elegans Hypothetical
           protein B0280.13 protein.
          Length = 616

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 23/77 (29%), Positives = 32/77 (41%), Gaps = 5/77 (6%)
 Frame = +2

Query: 626 PPGKLPRALS--CSDPAAYRNTCPPFSPSGSVAPFSXLP---PGRYLSSV*VVPPQXGAV 790
           PP   P  +    S   +Y +T PP +P  +  P S +P   P    + V   PP     
Sbjct: 443 PPPSAPPTIKFPISTGPSYSSTTPPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPP--- 499

Query: 791 LPXNPPVXTPDRLAPYP 841
            P  PP+ TP  + P P
Sbjct: 500 -PPLPPIATPSSVPPPP 515


>Z68338-7|CAA92756.2|  866|Caenorhabditis elegans Hypothetical
           protein T24B8.4 protein.
          Length = 866

 Score = 29.9 bits (64), Expect = 2.5
 Identities = 20/50 (40%), Positives = 23/50 (46%), Gaps = 1/50 (2%)
 Frame = +1

Query: 727 IXPPW*VSQFGVGRSPPXWGCVAPKPPRF-XPRPVGPLSG*LSVFEXQPR 873
           I PP  +   G+   PP  G + P PP F  P P  P SG L V    PR
Sbjct: 83  IPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPPSG-LGVAPQPPR 131


>Z80215-14|CAI79138.1|  662|Caenorhabditis elegans Hypothetical
           protein C36B1.12c protein.
          Length = 662

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = -3

Query: 529 KRQQRGLFTVPGLLLAFCSHVLSCV-IPLILWITVL 425
           +RQ      +  + +A C HVL C+ +P + WI++L
Sbjct: 390 RRQPYAFILLDVINMALCMHVLKCLRLPSLKWISIL 425


>Z80215-13|CAI79137.1|  640|Caenorhabditis elegans Hypothetical
           protein C36B1.12b protein.
          Length = 640

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = -3

Query: 529 KRQQRGLFTVPGLLLAFCSHVLSCV-IPLILWITVL 425
           +RQ      +  + +A C HVL C+ +P + WI++L
Sbjct: 390 RRQPYAFILLDVINMALCMHVLKCLRLPSLKWISIL 425


>Z80215-12|CAB02277.1|  652|Caenorhabditis elegans Hypothetical
           protein C36B1.12a protein.
          Length = 652

 Score = 29.5 bits (63), Expect = 3.3
 Identities = 12/36 (33%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
 Frame = -3

Query: 529 KRQQRGLFTVPGLLLAFCSHVLSCV-IPLILWITVL 425
           +RQ      +  + +A C HVL C+ +P + WI++L
Sbjct: 390 RRQPYAFILLDVINMALCMHVLKCLRLPSLKWISIL 425


>Z83102-3|CAB05466.1|  399|Caenorhabditis elegans Hypothetical
           protein C54C8.4 protein.
          Length = 399

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 13/42 (30%), Positives = 22/42 (52%)
 Frame = -1

Query: 168 IKHFFHCILVVVCPNSSMYLIMSGSN*PSXKGDPRPRKYQQF 43
           IK    C ++    +   YL+ +GSN  +   + RP+KYQ +
Sbjct: 10  IKLLLSCFVIYSTFSILNYLLFTGSNIKNLLNERRPQKYQPY 51


>AF040660-8|AAN65288.1|  594|Caenorhabditis elegans Hypothetical
           protein W05G11.6d protein.
          Length = 594

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +1

Query: 751 QFGVGRSPPXWGCVAPKPPRFXPRPVGPLSG*LS 852
           QFGV       GC+A +P    P  +GP+ G LS
Sbjct: 139 QFGVELDSRFPGCMAGRPMYVVPYSMGPIGGPLS 172


>AF040660-6|AAN65286.1|  541|Caenorhabditis elegans Hypothetical
           protein W05G11.6b protein.
          Length = 541

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +1

Query: 751 QFGVGRSPPXWGCVAPKPPRFXPRPVGPLSG*LS 852
           QFGV       GC+A +P    P  +GP+ G LS
Sbjct: 29  QFGVELDSRFPGCMAGRPMYVVPYSMGPIGGPLS 62


>AF040660-5|AAC71149.1|  651|Caenorhabditis elegans Hypothetical
           protein W05G11.6a protein.
          Length = 651

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/34 (41%), Positives = 18/34 (52%)
 Frame = +1

Query: 751 QFGVGRSPPXWGCVAPKPPRFXPRPVGPLSG*LS 852
           QFGV       GC+A +P    P  +GP+ G LS
Sbjct: 139 QFGVELDSRFPGCMAGRPMYVVPYSMGPIGGPLS 172


>AC006729-6|AAF60464.1|  282|Caenorhabditis elegans Hypothetical
           protein Y24D9A.5 protein.
          Length = 282

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 10/30 (33%), Positives = 20/30 (66%)
 Frame = +3

Query: 420 GGNTVIHRIRGITQERTCEQKASKRPGTVK 509
           GG +V +R   + Q+++   ++SKRPG ++
Sbjct: 167 GGKSVFYRFTNLIQKKSFSVRSSKRPGILQ 196


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,654,684
Number of Sequences: 27780
Number of extensions: 409551
Number of successful extensions: 1184
Number of sequences better than 10.0: 12
Number of HSP's better than 10.0 without gapping: 1044
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1177
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2234373834
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)