Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_K04
         (853 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine hydroxy...   210   1e-56
AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosin...    28   0.11 
U81038-1|AAB39355.1|  412|Tribolium castaneum transcription fact...    24   1.8  
AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.           24   1.8  
AY600516-1|AAT11864.1|  143|Tribolium castaneum optomotor-blind-...    22   7.1  
EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggeri...    21   9.4  
DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.        21   9.4  

>EF592178-1|ABQ95974.1|  532|Tribolium castaneum tyrosine
           hydroxylase protein.
          Length = 532

 Score =  210 bits (512), Expect = 1e-56
 Identities = 109/171 (63%), Positives = 123/171 (71%), Gaps = 2/171 (1%)
 Frame = +3

Query: 192 RRKQIAEIAFAYKYGDPIPSIAYTEIENGTWQRVFNTVLDLMPKHACREYKAAFEKLQAA 371
           RRK+IAEIAFAYKYGDPIP I YTE E  TW  VFNTVL+LMPKHAC EY   F+ LQ  
Sbjct: 232 RRKEIAEIAFAYKYGDPIPYIQYTETETKTWGSVFNTVLELMPKHACSEYCRVFKMLQEE 291

Query: 372 DIFVPHRIPQLEDVSSFLA--*AHWLYPGXRLLVF*RHVTSSPRLXXRVFQSTQYVRHNN 545
           DIF P RIPQLE++S+FL       L P   LL     + S   L  R+FQSTQYVRH N
Sbjct: 292 DIFTPDRIPQLEEMSNFLKRHTGFSLRPAAGLLTARDFLAS---LAFRIFQSTQYVRHKN 348

Query: 546 SPFHTPEPDCIHELLGHIPLLADPSFAPIFARNWPWHXSGASDSEIEKLST 698
           +P+HTPEPDCIHELLGH+PLLADPSFA  F++       GASD+EIEKLST
Sbjct: 349 TPYHTPEPDCIHELLGHMPLLADPSFAQ-FSQEIGLASLGASDAEIEKLST 398



 Score =  109 bits (262), Expect = 3e-26
 Identities = 69/157 (43%), Positives = 83/157 (52%), Gaps = 5/157 (3%)
 Frame = +2

Query: 44  LLTENNISSKTPWFPRHASDLDNCNHLMTKYEPELDMNHPGFADKDYRGTQKTDCGNRFR 223
           L+ E+NIS+K PWFPRHASDLDNCNHLMTKYEP+LDMNHPGFADK+YR  +K      F 
Sbjct: 183 LIGEDNISAKNPWFPRHASDLDNCNHLMTKYEPDLDMNHPGFADKEYRARRKEIAEIAFA 242

Query: 224 LQIR*PDSVYRIH*NREWHLATSVQHRA*FDAQTRVQRVQGCVRETTGSRHIRTSSYSTT 403
            +   P   Y  +   E     SV     F+    +     C       + ++     T 
Sbjct: 243 YKYGDP-IPYIQYTETETKTWGSV-----FNTVLELMPKHACSEYCRVFKMLQEEDIFTP 296

Query: 404 GRCQ*LLGVSTL-----ALPWRXAAGLLTARDFLASL 499
            R   L  +S           R AAGLLTARDFLASL
Sbjct: 297 DRIPQLEEMSNFLKRHTGFSLRPAAGLLTARDFLASL 333



 Score = 92.3 bits (219), Expect = 4e-21
 Identities = 48/79 (60%), Positives = 55/79 (69%)
 Frame = +1

Query: 616 PASPQFSQEIGLGXPRALRILKSKNYLLVYWFTVEFGLCKEXQQLKAYGAALLSSIGELL 795
           P+  QFSQEIGL    A    + +    VYWFTVEFGLCKE   +KAYGA LLS+ GELL
Sbjct: 372 PSFAQFSQEIGLASLGASDA-EIEKLSTVYWFTVEFGLCKESGVVKAYGAGLLSAYGELL 430

Query: 796 HALNDQPELXXFEPAXTXV 852
           HAL+D+PEL  FEPA T V
Sbjct: 431 HALSDKPELRPFEPAVTAV 449


>AY618898-1|AAU87291.1|  803|Tribolium castaneum receptor tyrosine
           kinase Torso-likeprotein protein.
          Length = 803

 Score = 27.9 bits (59), Expect = 0.11
 Identities = 13/58 (22%), Positives = 28/58 (48%)
 Frame = -3

Query: 680 FRIRSARGMPRPISCENWGEAGVSQ*WYMTKKLVNTVRFRCVERRIVVAYVLCRLEYA 507
           FR +++        C+ W E    Q     + L+N+++ RC+E  ++  Y+    ++A
Sbjct: 39  FRKQNSSSCGNGNRCDLWSEKFPIQELKSQESLLNSIQIRCIESNMISFYLEATDDFA 96


>U81038-1|AAB39355.1|  412|Tribolium castaneum transcription factor
           Deformed protein.
          Length = 412

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 9/47 (19%), Positives = 24/47 (51%)
 Frame = +1

Query: 163 WFRGQRLQGNAENRLRKSLSLTNTVTRFRLSHTLKSRMALGNECSTP 303
           WF+ +R++   +N+L  + ++        ++ T K ++    + +TP
Sbjct: 280 WFQNRRMKWKKDNKLPNTKNVRRKTNPAGVTTTTKGKVRAKTQNATP 326


>AF321227-3|AAK16423.1|  412|Tribolium castaneum Dfd protein.
          Length = 412

 Score = 23.8 bits (49), Expect = 1.8
 Identities = 9/47 (19%), Positives = 24/47 (51%)
 Frame = +1

Query: 163 WFRGQRLQGNAENRLRKSLSLTNTVTRFRLSHTLKSRMALGNECSTP 303
           WF+ +R++   +N+L  + ++        ++ T K ++    + +TP
Sbjct: 280 WFQNRRMKWKKDNKLPNTKNVRRKTNPAGVTTTTKGKVRAKTQNATP 326


>AY600516-1|AAT11864.1|  143|Tribolium castaneum
           optomotor-blind-like protein protein.
          Length = 143

 Score = 21.8 bits (44), Expect = 7.1
 Identities = 11/33 (33%), Positives = 15/33 (45%)
 Frame = +2

Query: 56  NNISSKTPWFPRHASDLDNCNHLMTKYEPELDM 154
           NNIS K  +    A D     + M KY+P   +
Sbjct: 81  NNISDKHGFLKEKAVDFLTILNSMHKYQPRFHL 113


>EF222294-1|ABN79654.1|  451|Tribolium castaneum ecdysis triggering
           hormone receptorisoform B protein.
          Length = 451

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 12/41 (29%), Positives = 20/41 (48%)
 Frame = -2

Query: 540 CGVRIVSIGIRGKXSEARKSRAVRRPAAXRQGKASVLTPRS 418
           CG++IV    + K    RKS +     + +Q   S L+ R+
Sbjct: 368 CGMKIVKKRRKDKREITRKSTSSSTHTSSQQTSDSFLSKRN 408


>DQ414247-1|ABD63009.2|  414|Tribolium castaneum paired protein.
          Length = 414

 Score = 21.4 bits (43), Expect = 9.4
 Identities = 9/26 (34%), Positives = 13/26 (50%)
 Frame = +3

Query: 324 HACREYKAAFEKLQAADIFVPHRIPQ 401
           H   E + AFE+ Q  DI+    + Q
Sbjct: 230 HQLDELEKAFERTQYPDIYTREELAQ 255


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 198,642
Number of Sequences: 336
Number of extensions: 4676
Number of successful extensions: 15
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 9
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 11
length of database: 122,585
effective HSP length: 56
effective length of database: 103,769
effective search space used: 23555563
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)