Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_K04
         (853 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

05_05_0147 + 22715144-22715444,22716245-22716407,22716484-227165...    30   2.0  
07_03_0771 - 21381276-21381461,21381583-21381733,21381823-213820...    29   3.6  
02_04_0629 + 24597370-24597789                                         29   6.2  
01_05_0507 - 22800124-22800163,22800411-22800554,22801291-228018...    29   6.2  

>05_05_0147 +
           22715144-22715444,22716245-22716407,22716484-22716532,
           22716626-22716739,22716812-22717234,22717307-22717693,
           22717777-22717872,22717978-22718093,22718137-22718272,
           22718392-22718480,22718586-22718736,22719057-22719185,
           22719276-22719354,22719435-22719544
          Length = 780

 Score = 30.3 bits (65), Expect = 2.0
 Identities = 28/107 (26%), Positives = 42/107 (39%), Gaps = 1/107 (0%)
 Frame = +1

Query: 292 CSTPCLI*CPNTRAESTRLRSRNYRQQTYSYLIV-FHNWKMSVASWRKHTGFTLAXGCWS 468
           C  P L+ CP  + E+T     NY Q TYS L+     W   +        FTLA   + 
Sbjct: 370 CDFPRLVSCPRDKFEATLGPYFNYVQPTYSSLVASTPGWTGILMILIMSFSFTLATHSFR 429

Query: 469 SDGT*LPRLAXLXAYSNRHNTYATTIRLSTHLNLTVFTSFLVIYHYW 609
                LP      A  N    YA  + +  ++ L + + F+ +   W
Sbjct: 430 RSVVKLPSPLHHLAGFNAF-WYAHHLLVIAYILLVLHSYFIFLTKQW 475


>07_03_0771 -
           21381276-21381461,21381583-21381733,21381823-21382060,
           21382161-21382368,21382650-21382777,21382892-21383029,
           21383160-21384012
          Length = 633

 Score = 29.5 bits (63), Expect = 3.6
 Identities = 21/62 (33%), Positives = 32/62 (51%), Gaps = 2/62 (3%)
 Frame = -3

Query: 224 SESDFRNLFSAFPCN--LCPRNQDGSCLIRVRTWS*DGYSYRDQKRGAGTKVSCSRCYFR 51
           ++  FRN++S   C+  L P  Q  SCL  +      G+ +   + G G +V+  RCY R
Sbjct: 191 ADPGFRNIYSMAQCSPDLSPA-QCRSCLDGLVGQWWTGFLF--PRNGEGARVAGPRCYLR 247

Query: 50  SE 45
           SE
Sbjct: 248 SE 249


>02_04_0629 + 24597370-24597789
          Length = 139

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 13/26 (50%), Positives = 17/26 (65%)
 Frame = -2

Query: 495 EARKSRAVRRPAAXRQGKASVLTPRS 418
           + R+SRA  RPA  R+G A  +TP S
Sbjct: 99  QERRSRAGGRPAGSRRGSAVAVTPSS 124


>01_05_0507 -
           22800124-22800163,22800411-22800554,22801291-22801850,
           22803207-22803264,22803885-22804124,22804191-22804315
          Length = 388

 Score = 28.7 bits (61), Expect = 6.2
 Identities = 11/23 (47%), Positives = 14/23 (60%)
 Frame = +3

Query: 531 VRHNNSPFHTPEPDCIHELLGHI 599
           VRH+    H P PD  H L+GH+
Sbjct: 302 VRHHRWHLHFPSPDYRHILIGHL 324


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,993,986
Number of Sequences: 37544
Number of extensions: 502720
Number of successful extensions: 1407
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 1363
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1407
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2373961368
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)