Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_K04
         (853 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR ...    26   1.7  
U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse tra...    25   2.9  
M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.              23   8.9  

>AY347946-1|AAR28374.1|  640|Anopheles gambiae putative NPY GPCR
           protein.
          Length = 640

 Score = 25.8 bits (54), Expect = 1.7
 Identities = 12/32 (37%), Positives = 18/32 (56%)
 Frame = +3

Query: 609 ADPSFAPIFARNWPWHXSGASDSEIEKLSTGL 704
           A P    ++ARN+P+  S    + IE+LS  L
Sbjct: 57  AGPELFDMYARNYPYVSSTEEQNYIEQLSDSL 88


>U03849-2|AAA53489.1| 1049|Anopheles gambiae putative reverse
           transcriptase protein.
          Length = 1049

 Score = 25.0 bits (52), Expect = 2.9
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)
 Frame = +3

Query: 225 YKYGDPIPSIAYTEIEN-GTWQRVFNTVLDLMPKHACREYKAAFE 356
           YK GD   +I Y  I +     +VF  V+     HACR Y + ++
Sbjct: 606 YKKGDRTDAINYRGITSLCAIAKVFELVIYKNLLHACRSYLSPYQ 650


>M93690-1|AAA29364.1|  613|Anopheles gambiae ORF1 protein.
          Length = 613

 Score = 23.4 bits (48), Expect = 8.9
 Identities = 12/40 (30%), Positives = 19/40 (47%)
 Frame = -3

Query: 500 QARRGSHVPSEDQQPXARVKPVCLRQEATDIFQLWNTMRY 381
           Q ++ S+ P + QQ   R +P  +RQ+     Q     RY
Sbjct: 321 QQQQQSNQPQQQQQQTGRYQPPQMRQQLQQQQQQRQPQRY 360


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 891,012
Number of Sequences: 2352
Number of extensions: 18840
Number of successful extensions: 36
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 33
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 36
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 90545769
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)