Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_K04
(853 letters)
Database: bee
438 sequences; 146,343 total letters
Searching......................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase ... 206 3e-55
AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein. 23 2.7
AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein. 23 2.7
AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein. 23 2.7
AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein. 23 2.7
AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein ... 23 3.6
AB086196-1|BAD06465.1| 289|Apis mellifera Period protein. 23 3.6
AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic ac... 23 4.7
AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein. 23 4.7
AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced prot... 22 6.2
>AY855337-1|AAW47987.1| 510|Apis mellifera tyrosine hydroxylase
protein.
Length = 510
Score = 206 bits (502), Expect = 3e-55
Identities = 107/171 (62%), Positives = 123/171 (71%), Gaps = 2/171 (1%)
Frame = +3
Query: 192 RRKQIAEIAFAYKYGDPIPSIAYTEIENGTWQRVFNTVLDLMPKHACREYKAAFEKLQAA 371
RRK IAEIAFAY+YGD IP++ YTE E TW RVFNT++DL+PKHAC EY+ F+K+Q
Sbjct: 210 RRKFIAEIAFAYRYGDAIPTVPYTETETETWTRVFNTLVDLVPKHACAEYRRNFKKMQEE 269
Query: 372 DIFVPHRIPQLEDVSSFLA--*AHWLYPGXRLLVF*RHVTSSPRLXXRVFQSTQYVRHNN 545
IF PHRIPQL++VS FL L P LL R SS L RVFQSTQY+RH
Sbjct: 270 KIFEPHRIPQLQEVSEFLKKNTGFTLRPAAGLLTS-RDFLSS--LAFRVFQSTQYIRHIK 326
Query: 546 SPFHTPEPDCIHELLGHIPLLADPSFAPIFARNWPWHXSGASDSEIEKLST 698
SP+HTPEPDCIHELLGH+PLLADPSFA F++ GASD EIEKLST
Sbjct: 327 SPYHTPEPDCIHELLGHMPLLADPSFAQ-FSQEIGLASLGASDEEIEKLST 376
Score = 103 bits (248), Expect = 2e-24
Identities = 65/161 (40%), Positives = 82/161 (50%), Gaps = 7/161 (4%)
Frame = +2
Query: 38 IFLLTENNISSKTPWFPRHASDLDNCNHLMTKYEPELDMNHPGFADKDYRGTQK--TDCG 211
+ LL +N++S K PWFPRHASDLDNCNHLMTK+EP+LDMNHPGFADK+YR +K +
Sbjct: 159 VTLLADNSVSIKDPWFPRHASDLDNCNHLMTKFEPDLDMNHPGFADKEYRARRKFIAEIA 218
Query: 212 NRFRLQIR*PDSVYRIH*NREWHLATSVQHRA*FDAQTRVQRVQGCVRETTGSRHIRTSS 391
+R P Y W T V F+ + C + ++
Sbjct: 219 FAYRYGDAIPTVPYTETETETW---TRV-----FNTLVDLVPKHACAEYRRNFKKMQEEK 270
Query: 392 YSTTGRCQ*LLGVS-----TLALPWRXAAGLLTARDFLASL 499
R L VS R AAGLLT+RDFL+SL
Sbjct: 271 IFEPHRIPQLQEVSEFLKKNTGFTLRPAAGLLTSRDFLSSL 311
Score = 76.2 bits (179), Expect = 4e-16
Identities = 43/80 (53%), Positives = 51/80 (63%), Gaps = 1/80 (1%)
Frame = +1
Query: 616 PASPQFSQEIGLGXPRALRILKSKNYLLVYWFTVEFGLCKEXQQLKAYGAALLSSIGELL 795
P+ QFSQEIGL A + + +YWFTVEFGLCKE +KAYGA LLS+ GELL
Sbjct: 350 PSFAQFSQEIGLASLGASDE-EIEKLSTIYWFTVEFGLCKEGPDVKAYGAGLLSAYGELL 408
Query: 796 HAL-NDQPELXXFEPAXTXV 852
HAL + + E FEP T V
Sbjct: 409 HALTSGKCEHRPFEPKSTAV 428
>AY686596-1|AAT96374.1| 1946|Apis mellifera Dscam protein.
Length = 1946
Score = 23.4 bits (48), Expect = 2.7
Identities = 10/26 (38%), Positives = 12/26 (46%)
Frame = -3
Query: 662 RGMPRPISCENWGEAGVSQ*WYMTKK 585
RG P + CE GE + W M K
Sbjct: 790 RGEPAVLQCEAQGEKPIGILWNMNNK 815
>AY336529-1|AAQ02340.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.4 bits (48), Expect = 2.7
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -2
Query: 369 LPVVSRTQPCTLCTRVW 319
+P+ + T+PCT R W
Sbjct: 292 VPIDANTKPCTWAARPW 308
>AY336528-1|AAQ02339.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.4 bits (48), Expect = 2.7
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -2
Query: 369 LPVVSRTQPCTLCTRVW 319
+P+ + T+PCT R W
Sbjct: 292 VPIDANTKPCTWAARPW 308
>AY217097-1|AAO39761.1| 712|Apis mellifera transferrin protein.
Length = 712
Score = 23.4 bits (48), Expect = 2.7
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = -2
Query: 369 LPVVSRTQPCTLCTRVW 319
+P+ + T+PCT R W
Sbjct: 292 VPIDANTKPCTWAARPW 308
>AF159569-1|AAF70859.1| 1124|Apis mellifera period clock protein
protein.
Length = 1124
Score = 23.0 bits (47), Expect = 3.6
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = -1
Query: 514 NTRXXKRGEEVTCRQKTSSRSPG*SQCAYAKKLLTSSSCGIR*GT 380
N + G TC S RS G S + + +S CG R T
Sbjct: 9 NAKVSDSGYSNTCSNSQSQRSSGSSISRNSNRSESSGYCGRRPST 53
>AB086196-1|BAD06465.1| 289|Apis mellifera Period protein.
Length = 289
Score = 23.0 bits (47), Expect = 3.6
Identities = 14/45 (31%), Positives = 18/45 (40%)
Frame = -1
Query: 514 NTRXXKRGEEVTCRQKTSSRSPG*SQCAYAKKLLTSSSCGIR*GT 380
N + G TC S RS G S + + +S CG R T
Sbjct: 9 NAKVSDSGYSNTCSNSQSQRSSGSSISRNSNRSESSGYCGRRPST 53
>AY569781-1|AAS75781.1| 461|Apis mellifera neuronal nicotinic
acetylcholine Apisa7-2 subunit protein.
Length = 461
Score = 22.6 bits (46), Expect = 4.7
Identities = 16/70 (22%), Positives = 32/70 (45%)
Frame = -3
Query: 281 SAILDFSVCDRRNRVTVFVSESDFRNLFSAFPCNLCPRNQDGSCLIRVRTWS*DGYSYRD 102
SA+++ +V V++S FR+ P ++ C+++ +W+ DGY
Sbjct: 104 SAVINTNVIVSHTGEVVWLSHGIFRSSCD-IDVEFFPFDEQ-RCVLKWASWTYDGYQLEL 161
Query: 101 QKRGAGTKVS 72
+K+ VS
Sbjct: 162 EKQSEQGDVS 171
>AF084556-1|AAC71015.1| 652|Apis mellifera pipsqueak protein.
Length = 652
Score = 22.6 bits (46), Expect = 4.7
Identities = 9/30 (30%), Positives = 16/30 (53%)
Frame = +2
Query: 92 HASDLDNCNHLMTKYEPELDMNHPGFADKD 181
H++D+ NC+ + K+E M+ D D
Sbjct: 319 HSTDIQNCDSVKIKFETLHTMDSSDTIDID 348
>AB264313-1|BAF43600.1| 900|Apis mellifera ecdysone-induced protein
75 protein.
Length = 900
Score = 22.2 bits (45), Expect = 6.2
Identities = 13/36 (36%), Positives = 18/36 (50%)
Frame = +3
Query: 495 RLXXRVFQSTQYVRHNNSPFHTPEPDCIHELLGHIP 602
R+ ++ + Q V N P H PD + ELL IP
Sbjct: 361 RMHNKLRNALQTVLAQNHPQH---PDILRELLKKIP 393
Database: bee
Posted date: Oct 23, 2007 1:17 PM
Number of letters in database: 146,343
Number of sequences in database: 438
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 240,297
Number of Sequences: 438
Number of extensions: 5512
Number of successful extensions: 34
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 30
length of database: 146,343
effective HSP length: 57
effective length of database: 121,377
effective search space used: 27431202
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -