Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_K02
         (810 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z81103-7|CAB03211.3|  579|Caenorhabditis elegans Hypothetical pr...    30   2.3  
Z81103-5|CAD56592.2|  550|Caenorhabditis elegans Hypothetical pr...    30   2.3  
Z81088-12|CAD56587.2|  579|Caenorhabditis elegans Hypothetical p...    30   2.3  
AF002198-10|AAF99937.1|  471|Caenorhabditis elegans Hypothetical...    30   2.3  
Z50756-4|CAA90639.1|  482|Caenorhabditis elegans Hypothetical pr...    28   6.9  
Z50741-5|CAA90612.1|  482|Caenorhabditis elegans Hypothetical pr...    28   6.9  
U40029-3|AAA81124.1|  269|Caenorhabditis elegans Hypothetical pr...    28   9.1  

>Z81103-7|CAB03211.3|  579|Caenorhabditis elegans Hypothetical
           protein M04G12.4a protein.
          Length = 579

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 17/47 (36%), Positives = 19/47 (40%)
 Frame = +3

Query: 195 QPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQGP 335
           QP VGN Y+P    P   +PP  Y     GY P   G      P  P
Sbjct: 91  QPLVGNSYDP----PVRFDPPYAYRATATGYMPTVPGLSTNSSPYYP 133


>Z81103-5|CAD56592.2|  550|Caenorhabditis elegans Hypothetical
           protein M04G12.4b protein.
          Length = 550

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 17/47 (36%), Positives = 19/47 (40%)
 Frame = +3

Query: 195 QPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQGP 335
           QP VGN Y+P    P   +PP  Y     GY P   G      P  P
Sbjct: 62  QPLVGNSYDP----PVRFDPPYAYRATATGYMPTVPGLSTNSSPYYP 104


>Z81088-12|CAD56587.2|  579|Caenorhabditis elegans Hypothetical
           protein M04G12.4a protein.
          Length = 579

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 17/47 (36%), Positives = 19/47 (40%)
 Frame = +3

Query: 195 QPTVGNGYEPIDNRPYIVNPPKDYNPNGNGYEPIDNGAYYVDRPQGP 335
           QP VGN Y+P    P   +PP  Y     GY P   G      P  P
Sbjct: 91  QPLVGNSYDP----PVRFDPPYAYRATATGYMPTVPGLSTNSSPYYP 133


>AF002198-10|AAF99937.1|  471|Caenorhabditis elegans Hypothetical
           protein F35F10.12 protein.
          Length = 471

 Score = 29.9 bits (64), Expect = 2.3
 Identities = 25/69 (36%), Positives = 30/69 (43%), Gaps = 3/69 (4%)
 Frame = +3

Query: 192 AQPT-VGNGYEPIDNRPYIVNPPKDYN--PNGNGYEPIDNGAYYVDRPQGPTLLQAYPFP 362
           +QPT +G G  P    P  V PP  Y   P  +G    DNGA     P GP      P P
Sbjct: 351 SQPTPIGGGVAPAGVAPAGVVPPPGYGFLPMTDG---TDNGAGDTPYPVGPPYPSDVPAP 407

Query: 363 WCSRWEVKN 389
           + S  E K+
Sbjct: 408 YPSGDEPKD 416


>Z50756-4|CAA90639.1|  482|Caenorhabditis elegans Hypothetical
           protein T08D10.1 protein.
          Length = 482

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +1

Query: 253 LPKTTTLMETATNLSTTVHITWTVPKGRPYFKPTPFPGAR 372
           +P T    E A+ + T++    T PK  P  +P P PG R
Sbjct: 23  IPPTVFRFEKASKIGTSLD---TTPKELPIRRPVPLPGPR 59


>Z50741-5|CAA90612.1|  482|Caenorhabditis elegans Hypothetical
           protein T08D10.1 protein.
          Length = 482

 Score = 28.3 bits (60), Expect = 6.9
 Identities = 14/40 (35%), Positives = 20/40 (50%)
 Frame = +1

Query: 253 LPKTTTLMETATNLSTTVHITWTVPKGRPYFKPTPFPGAR 372
           +P T    E A+ + T++    T PK  P  +P P PG R
Sbjct: 23  IPPTVFRFEKASKIGTSLD---TTPKELPIRRPVPLPGPR 59


>U40029-3|AAA81124.1|  269|Caenorhabditis elegans Hypothetical
           protein F10G7.6 protein.
          Length = 269

 Score = 27.9 bits (59), Expect = 9.1
 Identities = 14/30 (46%), Positives = 16/30 (53%), Gaps = 1/30 (3%)
 Frame = +3

Query: 219 EPIDNRPYI-VNPPKDYNPNGNGYEPIDNG 305
           EP D  P + V PP  + PN NG  P  NG
Sbjct: 239 EPDDPAPPLPVAPPPLHGPNNNGNGPAQNG 268


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,059,689
Number of Sequences: 27780
Number of extensions: 237232
Number of successful extensions: 678
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 600
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 675
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1987863822
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)