Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_J23
(901 letters)
Database: spombe
5004 sequences; 2,362,478 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
SPCC663.04 |rpl39||60S ribosomal protein L39|Schizosaccharomyces... 87 2e-18
SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr 3|||... 45 1e-05
SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr 1... 42 1e-04
SPBC660.06 |||conserved fungal protein|Schizosaccharomyces pombe... 40 5e-04
SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, wit... 37 0.003
SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr 2|||M... 37 0.003
SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr... 34 0.032
SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual 33 0.042
SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit Spp42|Schizosac... 33 0.073
SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex p... 31 0.22
SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family ... 29 1.2
SPAC23C4.12 |hhp2||serine/threonine protein kinase Hhp2 |Schizos... 28 2.1
SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein ... 23 3.1
SPBC83.01 |ucp8||UBA/EH/EF hand domain protein Ucp8|Schizosaccha... 27 3.6
SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31 |Schizo... 27 3.6
SPAC29B12.07 |sec16||multidomain vesicle coat component Sec16|Sc... 27 4.8
SPBC11B10.06 |sws1||SWIM domain containing-Srs2 interacting prot... 26 8.4
>SPCC663.04 |rpl39||60S ribosomal protein L39|Schizosaccharomyces
pombe|chr 3|||Manual
Length = 51
Score = 87.4 bits (207), Expect = 2e-18
Identities = 35/51 (68%), Positives = 43/51 (84%)
Frame = +2
Query: 77 MSAHKTFIIKRKLAKKLKQNRPIPQWVRMRTGNTIRYNAKRRHWRRTKLKL 229
M +HK+F K+KLAK +QNRPIPQW+R+RTGNT+ YN KRRHWRRTKL +
Sbjct: 1 MPSHKSFRTKQKLAKAARQNRPIPQWIRLRTGNTVHYNMKRRHWRRTKLNI 51
>SPCC895.05 |for3||formin For3|Schizosaccharomyces pombe|chr
3|||Manual
Length = 1461
Score = 45.2 bits (102), Expect = 1e-05
Identities = 24/61 (39%), Positives = 24/61 (39%)
Frame = +3
Query: 657 PPPPPPXXKKXXXXSXXXXXXXXPXPXPPPXXPXXXPPXXPPXXPPXXXXXXPPXPPXPP 836
PPPPPP P P PPP PP PP PP PP PP PP
Sbjct: 732 PPPPPPAV-------IVPTPAPAPIPVPPPAPIMGGPPPPPP--PPGVAGAGPPPPPPPP 782
Query: 837 P 839
P
Sbjct: 783 P 783
Score = 43.2 bits (97), Expect = 5e-05
Identities = 21/54 (38%), Positives = 21/54 (38%)
Frame = +3
Query: 732 PXPPPXXPXXXPPXXPPXXPPXXXXXXPPXPPXPPPXXXXXXXXPPXXXPPPPP 893
P PPP P P PP P PP PPP PP PPPPP
Sbjct: 733 PPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP---PPPPP 783
Score = 40.3 bits (90), Expect = 4e-04
Identities = 18/52 (34%), Positives = 18/52 (34%)
Frame = +2
Query: 740 PPXPPPXXXXXPPPXXXXPXXXXXPXXXPPPPXPXXXXXXPPXPXXPPXPPP 895
PP PPP P P P PPP P P PP PPP
Sbjct: 732 PPPPPPAVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPPPPPPP 783
Score = 36.7 bits (81), Expect = 0.004
Identities = 21/65 (32%), Positives = 22/65 (33%)
Frame = +2
Query: 647 KXPPPPPPPXXXKXXXXFXXLXXXXXXPXPXPPXPPPXXXXXPPPXXXXPXXXXXPXXXP 826
K PPPPPP + P P P PP PPP P P
Sbjct: 730 KSPPPPPP-----------AVIVPTPAPAPIPVPPPAPIMGGPPPPPPPPGVAGAGPPPP 778
Query: 827 PPPXP 841
PPP P
Sbjct: 779 PPPPP 783
>SPAC4F10.15c |wsp1||WASp homolog|Schizosaccharomyces pombe|chr
1|||Manual
Length = 574
Score = 41.9 bits (94), Expect = 1e-04
Identities = 32/106 (30%), Positives = 34/106 (32%), Gaps = 4/106 (3%)
Frame = +3
Query: 588 PXXPRGXXLGXGXXXPPXXKKXXPPPPP---PXXKKXXXXSXXXXXXXXPXPXPPPXXPX 758
P PR G PP + PPPPP P + P P PPP P
Sbjct: 340 PPPPRSNAAG-SIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNP-PAPPPAIPG 397
Query: 759 XXPPXXPPXXPPXXXXXXP-PXPPXPPPXXXXXXXXPPXXXPPPPP 893
P PP P P PP PP PP P PP
Sbjct: 398 RSAPALPPLGNASRTSTPPVPTPPSLPP------SAPPSLPPSAPP 437
Score = 41.9 bits (94), Expect = 1e-04
Identities = 25/81 (30%), Positives = 25/81 (30%), Gaps = 3/81 (3%)
Frame = +3
Query: 657 PPPPPPXXKKXXXXSXXXXXXXXPXPXP-PPXXPXXXPPXXPPXXPPXXXXXXPPXPPXP 833
PPP P P P PP P PP PP PP P PP P
Sbjct: 391 PPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLP 450
Query: 834 P--PXXXXXXXXPPXXXPPPP 890
P P P P PP
Sbjct: 451 PSAPIAPPLPAGMPAAPPLPP 471
Score = 38.7 bits (86), Expect = 0.001
Identities = 26/91 (28%), Positives = 27/91 (29%), Gaps = 10/91 (10%)
Frame = +2
Query: 653 PPPPPPPXXXKXXXXFXXLXXXXXX---PXPXPPXPPPXXXXXPPPXXXXPXXXXXPXXX 823
PP PPP + L P P PP PP PP P
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAP 447
Query: 824 P-------PPPXPXXXXXXPPXPXXPPXPPP 895
P PP P PP P P PPP
Sbjct: 448 PLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Score = 38.3 bits (85), Expect = 0.001
Identities = 26/88 (29%), Positives = 27/88 (30%)
Frame = +2
Query: 632 PPXXKKXPPPPPPPXXXKXXXXFXXLXXXXXXPXPXPPXPPPXXXXXPPPXXXXPXXXXX 811
PP + PPPPPP L PP PPP P P
Sbjct: 354 PPQGRSAPPPPPPRSAPSTGRQPPPL--SSSRAVSNPPAPPPAIPGRSAP-ALPPLGNAS 410
Query: 812 PXXXPPPPXPXXXXXXPPXPXXPPXPPP 895
PP P P P P PP PP
Sbjct: 411 RTSTPPVPTPPSLPPSAP-PSLPPSAPP 437
Score = 36.3 bits (80), Expect = 0.006
Identities = 25/91 (27%), Positives = 25/91 (27%), Gaps = 4/91 (4%)
Frame = +3
Query: 633 PPXXKKXXPPPPPPXXKKXXXXSXXXXXXXXPXPXPPPXXPXXXPPXXPPXXP--PXXXX 806
PP P P S P PP P PP PP P
Sbjct: 388 PPAPPPAIPGRSAPALPPLGNASRTSTPPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAP 447
Query: 807 XXPPXPPXPPPXXXXXXXXP--PXXXPPPPP 893
PP P PP P P P PPP
Sbjct: 448 PLPPSAPIAPPLPAGMPAAPPLPPAAPAPPP 478
Score = 35.9 bits (79), Expect = 0.008
Identities = 26/89 (29%), Positives = 27/89 (30%), Gaps = 2/89 (2%)
Frame = +3
Query: 633 PPXXKKXXPPPPPPXXKKXXXXSXXXXXXXXPXPXPPPXXPXXXPPXXPPXXPPXXXXXX 812
P PP PPP + S P PPP P PP
Sbjct: 282 PAINSTSKPPLPPPSSR----VSAAALAANKKRPPPPPP-PSRRNRGKPPIGNGSSNSSL 336
Query: 813 PPXPPXPPPXXXXXXXXPP--XXXPPPPP 893
PP PP P PP PPPPP
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPP 365
Score = 33.9 bits (74), Expect = 0.032
Identities = 17/60 (28%), Positives = 18/60 (30%)
Frame = +3
Query: 660 PPPPPXXKKXXXXSXXXXXXXXPXPXPPPXXPXXXPPXXPPXXPPXXXXXXPPXPPXPPP 839
PPPPP + S P PPP PP PP PP P
Sbjct: 337 PPPPPPPRSNAAGSIPLPPQGRSAPPPPPPRSAPSTGRQPPPLSSSRAVSNPPAPPPAIP 396
Score = 32.7 bits (71), Expect = 0.073
Identities = 19/57 (33%), Positives = 19/57 (33%), Gaps = 3/57 (5%)
Frame = +2
Query: 734 PXPPXPPPXXXXXPPPXXXXPXXXXXPXXXPPPPXPXXXXXXPPXP---XXPPXPPP 895
P PP PP PP P PPPP P P PP PPP
Sbjct: 311 PPPPPPPSRRNRGKPPIGNGSSNSSLP-PPPPPPRSNAAGSIPLPPQGRSAPPPPPP 366
Score = 30.3 bits (65), Expect = 0.39
Identities = 17/56 (30%), Positives = 17/56 (30%), Gaps = 1/56 (1%)
Frame = +2
Query: 728 PXPXPPXPPPXXXXXPPPXXXXPXXXXXPXXXP-PPPXPXXXXXXPPXPXXPPXPP 892
P PP P PP P P P PP P PP P P P
Sbjct: 432 PPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAPAPPPAPAPAPAAP 487
Score = 29.1 bits (62), Expect = 0.90
Identities = 17/58 (29%), Positives = 17/58 (29%), Gaps = 2/58 (3%)
Frame = +3
Query: 726 PXPXPPPXXPXXXPPXXPPXXPPXXXXXXPP--XPPXPPPXXXXXXXXPPXXXPPPPP 893
P PP P P PP PP P PP P PP PP
Sbjct: 237 PSSRPPERVPSLSAPAPPPIPPPSNGTVSSPPNSPPRPIAPVSMNPAINSTSKPPLPP 294
Score = 28.7 bits (61), Expect = 1.2
Identities = 19/56 (33%), Positives = 19/56 (33%), Gaps = 4/56 (7%)
Frame = +3
Query: 732 PXPPPXXPXXXP--PXXPPXXP--PXXXXXXPPXPPXPPPXXXXXXXXPPXXXPPP 887
P PP P P P PP P P P PP PP PP P P
Sbjct: 433 PSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPP----AAPAPPPAPAPAP 484
Score = 27.9 bits (59), Expect = 2.1
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = +3
Query: 726 PXPXPPPXXPXXXPPXXPPXXPPXXXXXXPPXPPXPPPXXXXXXXXPPXXXPPP 887
P P P P PP P P PP PPP PP P P
Sbjct: 224 PTSTSAPPIPPSIPSSRPPERVP--SLSAPAPPPIPPP-SNGTVSSPPNSPPRP 274
Score = 27.9 bits (59), Expect = 2.1
Identities = 20/73 (27%), Positives = 20/73 (27%), Gaps = 3/73 (4%)
Frame = +2
Query: 653 PPPPPPPXXXKXXXXFXXLXXXXXXPXPXPPXPP--PXXXXXPPPXXXXPXXXXXPXXXP 826
PP P PP P P PP P PP P P P
Sbjct: 415 PPVPTPPSLPPSAPPSLPPSAPPSLPMGAPAAPPLPPSAPIAPPLPAGMPAAPPLPPAAP 474
Query: 827 -PPPXPXXXXXXP 862
PPP P P
Sbjct: 475 APPPAPAPAPAAP 487
>SPBC660.06 |||conserved fungal protein|Schizosaccharomyces
pombe|chr 2|||Manual
Length = 273
Score = 39.9 bits (89), Expect = 5e-04
Identities = 31/93 (33%), Positives = 31/93 (33%), Gaps = 1/93 (1%)
Frame = -2
Query: 894 GGGXGGXXGX-GGXXXXXXGXGGGGXXXGXXXXXGXXXXGGGXXXXXGGGXGGXGXGXXX 718
GGG GG G GG G GG G G G GG GG GG G G
Sbjct: 187 GGGFGGFGGGSGGPPPGPGGFGGFGGFGGEGHHHGGHGGFGGGPGGFEGGPGGFGGGPGG 246
Query: 717 XXXXKXXXXXXFXXXGGGGGGGFFXXXGGXXXP 619
GGG GGF GG P
Sbjct: 247 FGGGLGGF--------GGGPGGFGGGPGGHGGP 271
>SPAC25G10.09c ||SPAC27F1.01c|actin cortical patch component, with EF
hand and WH2 motif |Schizosaccharomyces pombe|chr
1|||Manual
Length = 1794
Score = 37.1 bits (82), Expect = 0.003
Identities = 20/54 (37%), Positives = 20/54 (37%), Gaps = 4/54 (7%)
Frame = +3
Query: 744 PXXPXXXPPXXPPXX-PPXXXXXXPPXPPX---PPPXXXXXXXXPPXXXPPPPP 893
P P PP P PP PP PP PPP PP PPP P
Sbjct: 1683 PAHPVSTPPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 34.7 bits (76), Expect = 0.018
Identities = 17/48 (35%), Positives = 17/48 (35%)
Frame = +2
Query: 728 PXPXPPXPPPXXXXXPPPXXXXPXXXXXPXXXPPPPXPXXXXXXPPXP 871
P P PPP PPP P P PPPP P P P
Sbjct: 1700 PQMSAPTPPPPPMSVPPP-PSAPPMPAGPPSAPPPPLPASSAPSVPNP 1746
Score = 33.1 bits (72), Expect = 0.055
Identities = 15/47 (31%), Positives = 15/47 (31%)
Frame = +2
Query: 749 PPPXXXXXPPPXXXXPXXXXXPXXXPPPPXPXXXXXXPPXPXXPPXP 889
PP PP P P PPPP PP PP P
Sbjct: 1690 PPVRPQSAAPPQMSAPTPPPPPMSVPPPPSAPPMPAGPPSAPPPPLP 1736
Score = 27.9 bits (59), Expect = 2.1
Identities = 18/50 (36%), Positives = 18/50 (36%)
Frame = +3
Query: 732 PXPPPXXPXXXPPXXPPXXPPXXXXXXPPXPPXPPPXXXXXXXXPPXXXP 881
P PPP P PP PP PP P PP PP P P
Sbjct: 1705 PTPPPP-PMSVPP--PPSAPPM-----PAGPPSAPPPPLPASSAPSVPNP 1746
>SPBC13E7.09 |vrp1||verprolin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 309
Score = 37.1 bits (82), Expect = 0.003
Identities = 22/81 (27%), Positives = 22/81 (27%), Gaps = 1/81 (1%)
Frame = +2
Query: 653 PPPPPPPXXXKXXXXFXXLXXXXXXPXPXPPXPPPXXXXXPP-PXXXXPXXXXXPXXXPP 829
P P PP P P P PP PP P P P
Sbjct: 125 PSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSP 184
Query: 830 PPXPXXXXXXPPXPXXPPXPP 892
P P PP P P PP
Sbjct: 185 PSAPSLPSAVPPMPPKVPPPP 205
Score = 35.9 bits (79), Expect = 0.008
Identities = 19/76 (25%), Positives = 21/76 (27%)
Frame = +3
Query: 660 PPPPPXXKKXXXXSXXXXXXXXPXPXPPPXXPXXXPPXXPPXXPPXXXXXXPPXPPXPPP 839
PP P + + P P P P PP PP PP P
Sbjct: 130 PPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQPAAPVKSPPSAPS 189
Query: 840 XXXXXXXXPPXXXPPP 887
PP PPP
Sbjct: 190 LPSAVPPMPPKVPPPP 205
Score = 33.1 bits (72), Expect = 0.055
Identities = 19/55 (34%), Positives = 19/55 (34%), Gaps = 1/55 (1%)
Frame = +2
Query: 734 PXPPXPPPXXXXXPPPXXXXPXXXXXPXXXPPPPXPXXXXXXPP-XPXXPPXPPP 895
P P PPP PP P P PPP P PP P P PP
Sbjct: 145 PRPSIPPPSPASAPPIPSKAP---PIPSSLPPPAQPAAPVKSPPSAPSLPSAVPP 196
Score = 30.7 bits (66), Expect = 0.29
Identities = 15/54 (27%), Positives = 15/54 (27%)
Frame = +3
Query: 732 PXPPPXXPXXXPPXXPPXXPPXXXXXXPPXPPXPPPXXXXXXXXPPXXXPPPPP 893
P P P PP P PP P PP P PP P
Sbjct: 124 PPSAPAPPTPQSELRPPTSAPPRPSIPPPSPASAPPIPSKAPPIPSSLPPPAQP 177
Score = 28.3 bits (60), Expect = 1.6
Identities = 22/91 (24%), Positives = 22/91 (24%), Gaps = 4/91 (4%)
Frame = +2
Query: 632 PPXXKKXPPPPPPPXXXKXXXXFXXLXXXXXXPXPXPPXPP----PXXXXXPPPXXXXPX 799
PP PPP P K L P P PP P P P
Sbjct: 165 PPIPSSLPPPAQPAAPVKSPPSAPSLPSAVPPMPPKVPPPPLSQAPVANTSSRPSSFAPP 224
Query: 800 XXXXPXXXPPPPXPXXXXXXPPXPXXPPXPP 892
P P P PP PP
Sbjct: 225 AGHAPNVTSESPKFPNRGPSIPSASVPPVPP 255
>SPBC2D10.10c |fib1|fib|fibrillarin|Schizosaccharomyces pombe|chr
2|||Manual
Length = 305
Score = 33.9 bits (74), Expect = 0.032
Identities = 18/54 (33%), Positives = 18/54 (33%)
Frame = -2
Query: 894 GGGXGGXXGXGGXXXXXXGXGGGGXXXGXXXXXGXXXXGGGXXXXXGGGXGGXG 733
GG GG G G G GG G G GG GG GG G
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRG 65
Score = 31.5 bits (68), Expect = 0.17
Identities = 19/55 (34%), Positives = 19/55 (34%)
Frame = -1
Query: 889 GGGGXXXGGXXXXXXXXGGGXGGXGGXXXXXXGGXXGGXXGGXXXGXXGGGXGXG 725
GG GG GGG GG G G GG GG G G G G
Sbjct: 12 GGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGG-RGGARGGRGGSSGGRG 65
Score = 27.1 bits (57), Expect = 3.6
Identities = 17/62 (27%), Positives = 18/62 (29%)
Frame = -2
Query: 840 GXGGGGXXXGXXXXXGXXXXGGGXXXXXGGGXGGXGXGXXXXXXXKXXXXXXFXXXGGGG 661
G GG G GGG GGG GG G + GG
Sbjct: 9 GGRGGSRGGRGGFNGGRGGFGGGRGGARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAK 68
Query: 660 GG 655
GG
Sbjct: 69 GG 70
Score = 27.1 bits (57), Expect = 3.6
Identities = 19/52 (36%), Positives = 19/52 (36%), Gaps = 1/52 (1%)
Frame = -2
Query: 891 GGXGG-XXGXGGXXXXXXGXGGGGXXXGXXXXXGXXXXGGGXXXXXGGGXGG 739
GG GG G GG G G GG G G GG GG GG
Sbjct: 23 GGRGGFGGGRGG----ARGGGRGGARGGRGGRGGARGGRGGSSGGRGGAKGG 70
Score = 27.1 bits (57), Expect = 3.6
Identities = 15/39 (38%), Positives = 15/39 (38%)
Frame = -1
Query: 892 GGGGGXXXGGXXXXXXXXGGGXGGXGGXXXXXXGGXXGG 776
GG G GG GG GG GG GG GG
Sbjct: 33 GGARGGGRGGARGGRGGRGGARGGRGG-SSGGRGGAKGG 70
>SPAC23A1.17 |||WIP homolog|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1611
Score = 33.5 bits (73), Expect = 0.042
Identities = 23/83 (27%), Positives = 23/83 (27%), Gaps = 3/83 (3%)
Frame = +2
Query: 656 PPPPPPXXXKXXXXFXXLXXXXXXPXPXPPXPPPXXXXXP-PPXXXXPXXXXXPXXXPPP 832
PP P P P PP P P P P P PP
Sbjct: 1112 PPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPV 1171
Query: 833 PXPXXXXXXPPXP--XXPPXPPP 895
P P P P PP PPP
Sbjct: 1172 PAPSSGIPPVPKPAAGVPPVPPP 1194
Score = 33.5 bits (73), Expect = 0.042
Identities = 16/51 (31%), Positives = 16/51 (31%)
Frame = +3
Query: 738 PPPXXPXXXPPXXPPXXPPXXXXXXPPXPPXPPPXXXXXXXXPPXXXPPPP 890
P P PP PP P PP PPP P PP P
Sbjct: 1180 PVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVP 1230
Score = 33.1 bits (72), Expect = 0.055
Identities = 26/93 (27%), Positives = 26/93 (27%), Gaps = 5/93 (5%)
Frame = +2
Query: 632 PPXXKKXPPPPPPPXXXKXXXXFXXLXXXXXXPXPX---PPXPPPXXXXXP-PPXXXXPX 799
PP K PP P P P PP P P P PP P
Sbjct: 1140 PPVPKPSVAAPPVPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPP 1199
Query: 800 XXXXPXXXPPPPXPXXXXXXP-PXPXXPPXPPP 895
PP P P P P PP P P
Sbjct: 1200 VPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVP 1232
Score = 31.1 bits (67), Expect = 0.22
Identities = 17/54 (31%), Positives = 17/54 (31%), Gaps = 2/54 (3%)
Frame = +2
Query: 740 PPXPPPXXXXXPPPXXXXPXXXXXPXXXPPPPXPXXXXXXPPXP--XXPPXPPP 895
PP PPP P P PP P P P P PP P P
Sbjct: 1189 PPVPPPSEAPPVPKPSVGVPPVPPPSTAPPVPTPSAGLPPVPVPTAKAPPVPAP 1242
Score = 30.3 bits (65), Expect = 0.39
Identities = 23/83 (27%), Positives = 24/83 (28%), Gaps = 4/83 (4%)
Frame = +3
Query: 657 PPPPPPXXKKXXXXSXXXXXXXXPXPXPPPXXPXXXPPXXPPXXPPXXXXXXP-PXPPXP 833
PPP P + S P P P P P P P P P P
Sbjct: 1063 PPPVPAPSSE--IPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGA 1120
Query: 834 PPXXXXXXXXPPXXXP---PPPP 893
PP PP P PP P
Sbjct: 1121 PPVPKPSVAAPPVPVPSGAPPVP 1143
Score = 30.3 bits (65), Expect = 0.39
Identities = 21/88 (23%), Positives = 21/88 (23%), Gaps = 1/88 (1%)
Frame = +2
Query: 635 PXXKKXPPPPPPPXXXKXXXXFXXLXXXXXXPXPXPPXPPPXXXXXPPPXXXXPXXXXXP 814
P PP P P PP P P P P
Sbjct: 1077 PAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVP 1136
Query: 815 XXXPPPPXPXXXXXXPPXP-XXPPXPPP 895
PP P P P P PP P P
Sbjct: 1137 SGAPPVPKPSVAAPPVPAPSGAPPVPKP 1164
Score = 30.3 bits (65), Expect = 0.39
Identities = 24/93 (25%), Positives = 24/93 (25%), Gaps = 5/93 (5%)
Frame = +2
Query: 632 PPXXKKXPPPPPPPXXXKXXXXFXXLXXXXXXPXPX---PPXPPPXXXXXPPPXXXXPXX 802
PP K PP P P P PP P P P
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPP 1151
Query: 803 XXXPXXXPPPPXPXXXXXXPPXP--XXPPXPPP 895
P PP P P P P PP P P
Sbjct: 1152 VPAPSGAPPVPKPSVAAPPVPAPSSGIPPVPKP 1184
Score = 29.5 bits (63), Expect = 0.68
Identities = 17/58 (29%), Positives = 17/58 (29%), Gaps = 2/58 (3%)
Frame = +2
Query: 728 PXPXPPXPPPXXXXXPPPXXXXPXXXXXPXXXPPPPXPXXXXXXPPXP--XXPPXPPP 895
P PP P P P P PP P P P P PP P P
Sbjct: 1060 PSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAP 1117
Score = 29.5 bits (63), Expect = 0.68
Identities = 20/81 (24%), Positives = 20/81 (24%), Gaps = 3/81 (3%)
Frame = +3
Query: 657 PPPPPPXXKKXXXXSXXXXXXXXPXPXPPPXXPXXX---PPXXPPXXPPXXXXXXPPXPP 827
PP P P P P P P PP P P PP
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKPSVAAPPVPVPSGAPPVPKPSVAAPP 1151
Query: 828 XPPPXXXXXXXXPPXXXPPPP 890
P P P PP P
Sbjct: 1152 VPAPSGAPPVPKPSVAAPPVP 1172
Score = 29.1 bits (62), Expect = 0.90
Identities = 20/82 (24%), Positives = 21/82 (25%), Gaps = 3/82 (3%)
Frame = +3
Query: 657 PPPPPPXXKKXXXXSXXXXXXXXPXPX---PPPXXPXXXPPXXPPXXPPXXXXXXPPXPP 827
PP P P + P P PP P PP P PP
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
Query: 828 XPPPXXXXXXXXPPXXXPPPPP 893
P P P PP P
Sbjct: 1219 VPTPSAGLPPVPVPTAKAPPVP 1240
Score = 28.7 bits (61), Expect = 1.2
Identities = 22/93 (23%), Positives = 22/93 (23%), Gaps = 7/93 (7%)
Frame = +3
Query: 633 PPXXKKXXPPPPPPXXKKXXXXSXXXXXXXXPXPXPPPXX-------PXXXPPXXPPXXP 791
PP PP P P P P P P PP P
Sbjct: 1032 PPIPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPSSEIPSIPAPSGAPPVPAPSGI 1091
Query: 792 PXXXXXXPPXPPXPPPXXXXXXXXPPXXXPPPP 890
P PP P P P PP P
Sbjct: 1092 PPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVP 1124
Score = 28.7 bits (61), Expect = 1.2
Identities = 21/89 (23%), Positives = 21/89 (23%), Gaps = 5/89 (5%)
Frame = +3
Query: 633 PPXXKKXXPPPPPPXXKKXXXXSXXXXXXXXPXPXPPPXXPXXXP-----PXXPPXXPPX 797
PP K PP P P P P P P P PP P
Sbjct: 1159 PPVPKPSVAAPPVPAPSSGIPPVPKPAAGVPPVPPPSEAPPVPKPSVGVPPVPPPSTAPP 1218
Query: 798 XXXXXPPXPPXPPPXXXXXXXXPPXXXPP 884
PP P P P P
Sbjct: 1219 VPTPSAGLPPVPVPTAKAPPVPAPSSEAP 1247
Score = 27.9 bits (59), Expect = 2.1
Identities = 19/78 (24%), Positives = 19/78 (24%)
Frame = +3
Query: 657 PPPPPPXXKKXXXXSXXXXXXXXPXPXPPPXXPXXXPPXXPPXXPPXXXXXXPPXPPXPP 836
P PPP S P P P P P P PP P
Sbjct: 967 PSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPVPL 1026
Query: 837 PXXXXXXXXPPXXXPPPP 890
P P PP P
Sbjct: 1027 PSADAPPIPVPSTAPPVP 1044
Score = 27.9 bits (59), Expect = 2.1
Identities = 20/87 (22%), Positives = 20/87 (22%)
Frame = +3
Query: 633 PPXXKKXXPPPPPPXXKKXXXXSXXXXXXXXPXPXPPPXXPXXXPPXXPPXXPPXXXXXX 812
PP K PP P P P P P P PP
Sbjct: 1012 PPVPKLSSKAPPVPLPSADAPP-IPVPSTAPPVPIPTSTPPVPKSSSGAPSAPPPVPAPS 1070
Query: 813 PPXPPXPPPXXXXXXXXPPXXXPPPPP 893
P P P P P P P
Sbjct: 1071 SEIPSIPAPSGAPPVPAPSGIPPVPKP 1097
Score = 27.5 bits (58), Expect = 2.7
Identities = 21/82 (25%), Positives = 21/82 (25%), Gaps = 1/82 (1%)
Frame = +2
Query: 653 PPPPPPPXXXKXXXXFXXLXXXXXXPXPXPPXPPPXXXXXPPPXXXXPXXXXXPXXXPPP 832
PP PPP P P P P P P PP
Sbjct: 966 PPSIPPPLPVSNILSSPTSEPPKDHP-PSAPLSKPVSTSPAAPLARVPPVPKLSSKAPPV 1024
Query: 833 PXPXXXXXXPPXP-XXPPXPPP 895
P P P P PP P P
Sbjct: 1025 PLPSADAPPIPVPSTAPPVPIP 1046
Score = 26.2 bits (55), Expect = 6.3
Identities = 17/79 (21%), Positives = 18/79 (22%)
Frame = +3
Query: 657 PPPPPPXXKKXXXXSXXXXXXXXPXPXPPPXXPXXXPPXXPPXXPPXXXXXXPPXPPXPP 836
P PP + P PP P P P P P P
Sbjct: 963 PAAPPSIPPPLPVSNILSSPTSEPPKDHPPSAPLSKPVSTSPAAPLARVPPVPKLSSKAP 1022
Query: 837 PXXXXXXXXPPXXXPPPPP 893
P PP P P
Sbjct: 1023 PVPLPSADAPPIPVPSTAP 1041
Score = 25.8 bits (54), Expect = 8.4
Identities = 15/53 (28%), Positives = 15/53 (28%), Gaps = 1/53 (1%)
Frame = +2
Query: 740 PPXPPPXXXXXPPPXXXXPXXXXXPXXXPPPPXPXXXXXXPPXP-XXPPXPPP 895
P P P P P PP P P P P PP P P
Sbjct: 1074 PSIPAPSGAPPVPAPSGIPPVPKPSVAAPPVPKPSVAVPPVPAPSGAPPVPKP 1126
>SPAC4F8.12c |spp42|cwf6|U5 snRNP complex subunit
Spp42|Schizosaccharomyces pombe|chr 1|||Manual
Length = 2363
Score = 32.7 bits (71), Expect = 0.073
Identities = 12/25 (48%), Positives = 12/25 (48%)
Frame = +3
Query: 765 PPXXPPXXPPXXXXXXPPXPPXPPP 839
PP PP PP P PP PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQPPPPPP 29
Score = 31.1 bits (67), Expect = 0.22
Identities = 11/21 (52%), Positives = 11/21 (52%)
Frame = +3
Query: 732 PXPPPXXPXXXPPXXPPXXPP 794
P PPP P PP PP PP
Sbjct: 9 PPPPPPPPGFEPPSQPPPPPP 29
Score = 30.3 bits (65), Expect = 0.39
Identities = 13/28 (46%), Positives = 13/28 (46%)
Frame = +2
Query: 812 PXXXPPPPXPXXXXXXPPXPXXPPXPPP 895
P PPPP P P P PP PPP
Sbjct: 5 PPGNPPPPPPPPGFEPPSQP--PPPPPP 30
Score = 23.8 bits (49), Expect(2) = 4.2
Identities = 7/7 (100%), Positives = 7/7 (100%)
Frame = +2
Query: 653 PPPPPPP 673
PPPPPPP
Sbjct: 9 PPPPPPP 15
Score = 21.0 bits (42), Expect(2) = 4.2
Identities = 8/21 (38%), Positives = 8/21 (38%)
Frame = +2
Query: 734 PXPPXPPPXXXXXPPPXXXXP 796
P PP PP PP P
Sbjct: 10 PPPPPPPGFEPPSQPPPPPPP 30
>SPBC20F10.01 |gar1|SPBC25H2.01c|snoRNP pseudouridylase complex
protein Gar1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 194
Score = 31.1 bits (67), Expect = 0.22
Identities = 20/51 (39%), Positives = 20/51 (39%), Gaps = 1/51 (1%)
Frame = -1
Query: 892 GGGGGXXXG-GXXXXXXXXGGGXGGXGGXXXXXXGGXXGGXXGGXXXGXXG 743
GG GG G G GG GG GG GG GG GG G G
Sbjct: 145 GGRGGSRGGFGGNSRGGFGGGSRGGFGG---GSRGGSRGGFRGGSRGGFRG 192
Score = 30.7 bits (66), Expect = 0.29
Identities = 18/52 (34%), Positives = 18/52 (34%), Gaps = 1/52 (1%)
Frame = -2
Query: 891 GGXGG-XXGXGGXXXXXXGXGGGGXXXGXXXXXGXXXXGGGXXXXXGGGXGG 739
GG GG G GG G GG G G GG GG GG
Sbjct: 138 GGRGGFRGGRGGSRGGFGGNSRGGFGGGSRGGFGGGSRGGSRGGFRGGSRGG 189
Score = 28.7 bits (61), Expect = 1.2
Identities = 18/55 (32%), Positives = 18/55 (32%)
Frame = -2
Query: 891 GGXGGXXGXGGXXXXXXGXGGGGXXXGXXXXXGXXXXGGGXXXXXGGGXGGXGXG 727
G G G GG G GG G G GGG GGG G G
Sbjct: 129 GARNGPAGRGGRGGFRGGRGGSRGGFGGNSRGGF---GGGSRGGFGGGSRGGSRG 180
>SPAC16E8.01 |||cytoskeletal protein binding protein Sla1 family
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1420
Score = 28.7 bits (61), Expect = 1.2
Identities = 15/56 (26%), Positives = 15/56 (26%)
Frame = +2
Query: 728 PXPXPPXPPPXXXXXPPPXXXXPXXXXXPXXXPPPPXPXXXXXXPPXPXXPPXPPP 895
P P PP PP P P P P PP PPP
Sbjct: 189 PPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAPPPPPPP 244
Score = 28.3 bits (60), Expect = 1.6
Identities = 16/55 (29%), Positives = 16/55 (29%), Gaps = 1/55 (1%)
Frame = +3
Query: 732 PXPPPXXPXXXPPXXPPXXPPXXXXXXPPXPPXPPPXXXXXXXXP-PXXXPPPPP 893
P PPP P P P PP P P PPPPP
Sbjct: 190 PPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAPPPPPPP 244
Score = 26.2 bits (55), Expect = 6.3
Identities = 17/69 (24%), Positives = 19/69 (27%)
Frame = +3
Query: 633 PPXXKKXXPPPPPPXXKKXXXXSXXXXXXXXPXPXPPPXXPXXXPPXXPPXXPPXXXXXX 812
P PPPPPP + + P P P P
Sbjct: 184 PSDYNPPPPPPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAPP---- 239
Query: 813 PPXPPXPPP 839
PP PP PP
Sbjct: 240 PPPPPTLPP 248
Score = 25.8 bits (54), Expect = 8.4
Identities = 19/84 (22%), Positives = 21/84 (25%), Gaps = 6/84 (7%)
Frame = +3
Query: 657 PPPPPPXXKKXXXXSXXXXXXXXPXPXPPPXXPXXXP------PXXPPXXPPXXXXXXPP 818
PPPPP + + P P P P PP PP
Sbjct: 193 PPPPPAVEDQAADANEPDDYYSSGRAVSPEIPPTYTPKQADPLPAPPPPPPPTLPPQSTN 252
Query: 819 XPPXPPPXXXXXXXXPPXXXPPPP 890
P P PPPP
Sbjct: 253 TSQLPMPSRNVNNLGSQVNIPPPP 276
>SPAC23C4.12 |hhp2||serine/threonine protein kinase Hhp2
|Schizosaccharomyces pombe|chr 1|||Manual
Length = 400
Score = 27.9 bits (59), Expect = 2.1
Identities = 13/31 (41%), Positives = 18/31 (58%)
Frame = -1
Query: 241 FTSLQLELCPSPVTPLSVISNSVSCAHPYPL 149
++S+ L +P TP S +N V CA P PL
Sbjct: 332 YSSIPLPAERNPKTPQSFSTNIVQCASPSPL 362
>SPBC119.05c |||Wiskott-Aldrich syndrome homolog binding protein
Lsb1 |Schizosaccharomyces pombe|chr 2|||Manual
Length = 296
Score = 23.4 bits (48), Expect(2) = 3.1
Identities = 14/50 (28%), Positives = 14/50 (28%)
Frame = +2
Query: 740 PPXPPPXXXXXPPPXXXXPXXXXXPXXXPPPPXPXXXXXXPPXPXXPPXP 889
PP PPP P P PP P PP P P
Sbjct: 206 PPPPPPQQNYPPAASSSAPPMQYQQTAYPPQQAP-----YPPVQAYPQAP 250
Score = 22.2 bits (45), Expect(2) = 3.1
Identities = 7/9 (77%), Positives = 7/9 (77%)
Frame = +2
Query: 644 KKXPPPPPP 670
K PPPPPP
Sbjct: 203 KAQPPPPPP 211
>SPBC83.01 |ucp8||UBA/EH/EF hand domain protein
Ucp8|Schizosaccharomyces pombe|chr 2|||Manual
Length = 884
Score = 27.1 bits (57), Expect = 3.6
Identities = 16/56 (28%), Positives = 16/56 (28%)
Frame = +2
Query: 728 PXPXPPXPPPXXXXXPPPXXXXPXXXXXPXXXPPPPXPXXXXXXPPXPXXPPXPPP 895
P P P P P PPP P PP P P P PP
Sbjct: 729 PAPPTPAPTPAVKHHPPP---PPVRSSISPSMPPAPLTHANSSTPMNYVSQPESPP 781
>SPBC8D2.20c |sec31||COPII-coated vesicle component Sec31
|Schizosaccharomyces pombe|chr 2|||Manual
Length = 1224
Score = 27.1 bits (57), Expect = 3.6
Identities = 11/25 (44%), Positives = 17/25 (68%)
Frame = -1
Query: 211 SPVTPLSVISNSVSCAHPYPLRNGS 137
+P TP++V S++V+ AH Y GS
Sbjct: 982 NPYTPIAVASSTVNPAHTYKPHGGS 1006
>SPAC29B12.07 |sec16||multidomain vesicle coat component
Sec16|Schizosaccharomyces pombe|chr 1|||Manual
Length = 1995
Score = 26.6 bits (56), Expect = 4.8
Identities = 19/64 (29%), Positives = 19/64 (29%), Gaps = 8/64 (12%)
Frame = +3
Query: 726 PXPXPPPXXPXXXPP------XXPPXXPPXXXXXXP--PXPPXPPPXXXXXXXXPPXXXP 881
P P PP P PP PP PP P P P P P P
Sbjct: 1882 PPPPPPMALPKAGPPSAAPTSALPPAGPPAGATAISGNPGMPAPVPLTGKETAVPLSSMP 1941
Query: 882 PPPP 893
PP
Sbjct: 1942 NAPP 1945
>SPBC11B10.06 |sws1||SWIM domain containing-Srs2 interacting protein
1|Schizosaccharomyces pombe|chr 2|||Manual
Length = 209
Score = 25.8 bits (54), Expect = 8.4
Identities = 16/47 (34%), Positives = 23/47 (48%)
Frame = -1
Query: 199 PLSVISNSVSCAHPYPLRNGSVLFQLFGQFALNNKRLMGRHFEQSSC 59
P +I +S S HP PL +G VL + + NNK + + SC
Sbjct: 109 PAMLILDSKSI-HPLPLTDGEVLHRWECEVDSNNKTTIDLKYWYCSC 154
Database: spombe
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 2,362,478
Number of sequences in database: 5004
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 2,656,182
Number of Sequences: 5004
Number of extensions: 52868
Number of successful extensions: 710
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 108
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 304
length of database: 2,362,478
effective HSP length: 72
effective length of database: 2,002,190
effective search space used: 454497130
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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