Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_J22
         (852 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY060665-1|AAL28213.1|  300|Drosophila melanogaster GH09035p pro...    50   3e-06
AE014296-3106|AAF49189.1|  300|Drosophila melanogaster CG10424-P...    50   3e-06

>AY060665-1|AAL28213.1|  300|Drosophila melanogaster GH09035p
           protein.
          Length = 300

 Score = 50.4 bits (115), Expect = 3e-06
 Identities = 25/56 (44%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
 Frame = +1

Query: 466 RAGADIVYVITTEDAAPVIKIYSPDLIVYPFLNKKYA-SKISSLLPKMDAIVIGPG 630
           R GAD+ +V    +A+ +IK YSPDLIV+P L+   A  +I+  L ++  +VIGPG
Sbjct: 59  RVGADLAHVFCHSNASAIIKSYSPDLIVHPVLDCVDAVERIAPWLERLHVVVIGPG 114



 Score = 43.2 bits (97), Expect = 5e-04
 Identities = 21/35 (60%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
 Frame = +2

Query: 332 LKKLTSNIVPTL-NGKSKGDLGRIGIIGGSVEYTG 433
           L  L   +VP L N K KG  GRIG+IGGS+EYTG
Sbjct: 14  LLALFKTVVPKLVNNKHKGQYGRIGVIGGSLEYTG 48


>AE014296-3106|AAF49189.1|  300|Drosophila melanogaster CG10424-PA
           protein.
          Length = 300

 Score = 50.4 bits (115), Expect = 3e-06
 Identities = 25/56 (44%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
 Frame = +1

Query: 466 RAGADIVYVITTEDAAPVIKIYSPDLIVYPFLNKKYA-SKISSLLPKMDAIVIGPG 630
           R GAD+ +V    +A+ +IK YSPDLIV+P L+   A  +I+  L ++  +VIGPG
Sbjct: 59  RVGADLAHVFCHSNASAIIKSYSPDLIVHPVLDCVDAVERIAPWLERLHVVVIGPG 114



 Score = 43.2 bits (97), Expect = 5e-04
 Identities = 21/35 (60%), Positives = 24/35 (68%), Gaps = 1/35 (2%)
 Frame = +2

Query: 332 LKKLTSNIVPTL-NGKSKGDLGRIGIIGGSVEYTG 433
           L  L   +VP L N K KG  GRIG+IGGS+EYTG
Sbjct: 14  LLALFKTVVPKLVNNKHKGQYGRIGVIGGSLEYTG 48


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,130,911
Number of Sequences: 53049
Number of extensions: 490599
Number of successful extensions: 1144
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 1011
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1139
length of database: 24,988,368
effective HSP length: 84
effective length of database: 20,532,252
effective search space used: 4085918148
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)