Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_J22
         (852 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z14092-2|CAA78469.2|  307|Caenorhabditis elegans Hypothetical pr...    59   3e-09

>Z14092-2|CAA78469.2|  307|Caenorhabditis elegans Hypothetical
           protein R107.2 protein.
          Length = 307

 Score = 59.3 bits (137), Expect = 3e-09
 Identities = 31/56 (55%), Positives = 39/56 (69%)
 Frame = +1

Query: 463 SRAGADIVYVITTEDAAPVIKIYSPDLIVYPFLNKKYASKISSLLPKMDAIVIGPG 630
           SR GAD++++    DAA VIK YSPDLIV+P +    A+ I   L +MDAIVIGPG
Sbjct: 44  SRLGADLIHIFCDPDAAQVIKGYSPDLIVHPGMT---ANSIIPKLSRMDAIVIGPG 96



 Score = 36.7 bits (81), Expect = 0.021
 Identities = 17/32 (53%), Positives = 22/32 (68%)
 Frame = +2

Query: 338 KLTSNIVPTLNGKSKGDLGRIGIIGGSVEYTG 433
           KL   + P L    KGD G++G+IGGS+EYTG
Sbjct: 6   KLLPKLTPHLR---KGDCGKMGVIGGSLEYTG 34


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,846,360
Number of Sequences: 27780
Number of extensions: 266397
Number of successful extensions: 673
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 657
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 672
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2118983636
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)