Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= MFBP07_F_J20
         (1459 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

D88460-1|BAA20128.1|  505|Homo sapiens N-WASP protein.                 28   0.19 
BC052955-1|AAH52955.1|  505|Homo sapiens Wiskott-Aldrich syndrom...    28   0.19 
AC006333-1|AAQ96857.1|  505|Homo sapiens unknown protein.              28   0.19 
AM295156-1|CAL26602.1|  505|Homo sapiens WASL protein protein.         28   1.6  

>D88460-1|BAA20128.1|  505|Homo sapiens N-WASP protein.
          Length = 505

 Score = 28.3 bits (60), Expect(2) = 0.19
 Identities = 16/51 (31%), Positives = 18/51 (35%)
 Frame = -2

Query: 171 PXXPARXLCPXPPXXXPRPXPPXTXPXXXPPXEX*RGXXAPSXPRXXXXPP 19
           P  P   + P PP   P   P  + P   PP     G  AP  P     PP
Sbjct: 335 PPPPPNRMYPPPPPALPSSAP--SGPPPPPPSVLGVGPVAPPPPPPPPPPP 383



 Score = 27.5 bits (58), Expect(2) = 0.19
 Identities = 20/67 (29%), Positives = 21/67 (31%), Gaps = 3/67 (4%)
 Frame = -2

Query: 480 PXSPPXRXSVLPPXXXXPXXXRXPPXLXNXRXRXTXPPPSXXPXXXXXPFP---XXCXXX 310
           P  PP      PP    P     PP     R     PPPS  P     P P         
Sbjct: 277 PPPPPPSRGGPPPPPPPPHSSGPPPPPARGRG-APPPPPSRAPTAAPPPPPPSRPSVEVP 335

Query: 309 PPPXXRV 289
           PPP  R+
Sbjct: 336 PPPPNRM 342


>BC052955-1|AAH52955.1|  505|Homo sapiens Wiskott-Aldrich
           syndrome-like protein.
          Length = 505

 Score = 28.3 bits (60), Expect(2) = 0.19
 Identities = 16/51 (31%), Positives = 18/51 (35%)
 Frame = -2

Query: 171 PXXPARXLCPXPPXXXPRPXPPXTXPXXXPPXEX*RGXXAPSXPRXXXXPP 19
           P  P   + P PP   P   P  + P   PP     G  AP  P     PP
Sbjct: 335 PPPPPNRMYPPPPPALPSSAP--SGPPPPPPSVLGVGPVAPPPPPPPPPPP 383



 Score = 27.5 bits (58), Expect(2) = 0.19
 Identities = 20/67 (29%), Positives = 21/67 (31%), Gaps = 3/67 (4%)
 Frame = -2

Query: 480 PXSPPXRXSVLPPXXXXPXXXRXPPXLXNXRXRXTXPPPSXXPXXXXXPFP---XXCXXX 310
           P  PP      PP    P     PP     R     PPPS  P     P P         
Sbjct: 277 PPPPPPSRGGPPPPPPPPHNSGPPPPPARGRG-APPPPPSRAPTAAPPPPPPSRPSVAVP 335

Query: 309 PPPXXRV 289
           PPP  R+
Sbjct: 336 PPPPNRM 342


>AC006333-1|AAQ96857.1|  505|Homo sapiens unknown protein.
          Length = 505

 Score = 28.3 bits (60), Expect(2) = 0.19
 Identities = 16/51 (31%), Positives = 18/51 (35%)
 Frame = -2

Query: 171 PXXPARXLCPXPPXXXPRPXPPXTXPXXXPPXEX*RGXXAPSXPRXXXXPP 19
           P  P   + P PP   P   P  + P   PP     G  AP  P     PP
Sbjct: 335 PPPPPNRMYPPPPPALPSSAP--SGPPPPPPSVLGVGPVAPPPPPPPPPPP 383



 Score = 27.5 bits (58), Expect(2) = 0.19
 Identities = 20/67 (29%), Positives = 21/67 (31%), Gaps = 3/67 (4%)
 Frame = -2

Query: 480 PXSPPXRXSVLPPXXXXPXXXRXPPXLXNXRXRXTXPPPSXXPXXXXXPFP---XXCXXX 310
           P  PP      PP    P     PP     R     PPPS  P     P P         
Sbjct: 277 PPPPPPSRGGPPPPPPPPHNSGPPPPPARGRG-APPPPPSRAPTAAPPPPPPSRPSVAVP 335

Query: 309 PPPXXRV 289
           PPP  R+
Sbjct: 336 PPPPNRM 342


>AM295156-1|CAL26602.1|  505|Homo sapiens WASL protein protein.
          Length = 505

 Score = 28.3 bits (60), Expect(2) = 1.6
 Identities = 17/60 (28%), Positives = 17/60 (28%)
 Frame = -2

Query: 480 PXSPPXRXSVLPPXXXXPXXXRXPPXLXNXRXRXTXPPPSXXPXXXXXPFPXXCXXXPPP 301
           P  PP   S  PP          PP           PPPS        P P      PPP
Sbjct: 289 PPPPPPHNSGPPPPPARGRGAPPPPPSRAPTAAPPPPPPSRPSVAVPPPPPNRMYPPPPP 348



 Score = 24.2 bits (50), Expect(2) = 1.6
 Identities = 12/41 (29%), Positives = 14/41 (34%)
 Frame = -2

Query: 201 PRXLXXXXTFPXXPARXLCPXPPXXXPRPXPPXTXPXXXPP 79
           P  L    + P  P   +    P   P P PP   P   PP
Sbjct: 348 PALLSSAPSGPPPPPPSVLGVGPVAPPPPPPPPPPPGPPPP 388


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 78,639,691
Number of Sequences: 237096
Number of extensions: 1133347
Number of successful extensions: 11647
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 3798
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 8998
length of database: 76,859,062
effective HSP length: 93
effective length of database: 54,809,134
effective search space used: 21485180528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)