BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_J19
(942 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0765 + 11000724-11002496 38 0.012
06_03_0790 - 24636805-24637770 36 0.062
07_03_0560 + 19479597-19480667 35 0.11
07_03_0558 + 19461369-19462448 35 0.11
12_02_1174 - 26696869-26698191 34 0.19
07_03_0559 + 19475893-19476783 33 0.25
06_01_0178 + 1386981-1387505 33 0.25
04_03_0904 + 20717005-20718087 33 0.25
08_01_0375 - 3307206-3307316,3307870-3307965,3308061-3308132,330... 33 0.44
07_03_1751 - 29215074-29216270 33 0.44
01_01_0570 - 4231100-4232560 33 0.44
08_01_0059 - 394001-394708 32 0.76
03_02_0539 - 9329572-9330729,9330988-9331041 31 1.0
10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121... 31 1.3
01_01_0446 + 3321832-3322232,3322398-3322455,3322810-3323748,332... 31 1.3
03_05_0732 - 27232299-27232535,27232717-27232746,27233094-272331... 27 1.3
12_01_0838 - 7830944-7831444 31 1.8
07_03_0177 - 14770777-14772045 31 1.8
03_05_0630 + 26260159-26260272,26260520-26260894 31 1.8
08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,336... 30 2.3
06_03_1506 + 30641428-30642168 30 2.3
02_05_0686 - 30900748-30902167,30903442-30904742 30 2.3
01_05_0070 - 17842347-17842643 30 2.3
12_02_0299 - 17051570-17052474,17053542-17053755 30 3.1
04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078 30 3.1
11_06_0610 - 25449085-25453284 29 4.1
10_01_0026 - 351737-353443 29 4.1
06_03_1326 - 29355467-29355817 29 4.1
08_02_1084 - 24232968-24234779 29 5.4
04_04_1641 + 34993807-34994589,34994924-34995022,34995521-349956... 29 5.4
04_03_0098 + 11183039-11183752 29 5.4
02_04_0400 - 22608519-22608844,22609044-22609122 29 5.4
02_04_0567 - 23914330-23914461,23915016-23915136,23915954-239160... 25 6.4
03_06_0427 - 33857008-33857137,33857224-33857258,33857966-338580... 29 7.1
03_01_0023 + 198414-198968 29 7.1
12_01_0269 + 1965126-1965169,1965398-1966064,1966181-1966693 28 9.4
09_06_0277 - 21983049-21983080,21983250-21984788,21986619-219866... 28 9.4
09_03_0145 - 12749288-12751510 28 9.4
06_02_0175 - 12624608-12625297 28 9.4
05_01_0028 + 182528-183852,183967-184127,184872-185116,185330-18... 28 9.4
03_01_0515 - 3864796-3865425 28 9.4
>03_02_0765 + 11000724-11002496
Length = 590
Score = 37.9 bits (84), Expect = 0.012
Identities = 31/120 (25%), Positives = 33/120 (27%)
Frame = -3
Query: 784 GGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXGDXXDXXXXGXXGXXXX 605
GG+G GG G G G G L GG G G G G G G
Sbjct: 66 GGLGHGGGLGGGFGGGKGGGLGGGGGLGGGGGAGGGFGGGLGHGGGLGGGFGGGKGGGLG 125
Query: 604 XXXXMQXXVGXXGXRXX*XXXXXGXXGGXXXRAGXXGGXXXXXEXRXFXXXGXGXGXXXG 425
+ G G G GG AG GG G G G G
Sbjct: 126 GGGGLGGGAGGGGGLGSGGGLGGGAGGGLGGGAGGGGGLGGGAGGGLGGGAGGGGGVGGG 185
Score = 33.1 bits (72), Expect = 0.33
Identities = 29/121 (23%), Positives = 30/121 (24%)
Frame = -3
Query: 784 GGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXGDXXDXXXXGXXGXXXX 605
GG G GG+G G F G GGG G G G G G
Sbjct: 456 GGAGGGGGLDGGAGGGAEAGGGFGGGAGAGTGGGGGLGGGAGGGGGLGGGAGGGLGGGAG 515
Query: 604 XXXXMQXXVGXXGXRXX*XXXXXGXXGGXXXRAGXXGGXXXXXEXRXFXXXGXGXGXXXG 425
G G GG G GG G G G G
Sbjct: 516 AGGGFGGGKGGGFGGGLGGSSGSGFGGGFGAGGGAGGGAGAGFGGGAGAGGGGGLGAGGG 575
Query: 424 G 422
G
Sbjct: 576 G 576
Score = 31.9 bits (69), Expect = 0.76
Identities = 31/121 (25%), Positives = 32/121 (26%)
Frame = -3
Query: 784 GGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXGDXXDXXXXGXXGXXXX 605
GG G GG+G G G G L GGG G G G G
Sbjct: 238 GGAGGGGGLGGGAGGGLGGGAGGGGGLSGGAGGGLGGGAGAGGGGGLGGGTGGGGGLGGG 297
Query: 604 XXXXMQXXVGXXGXRXX*XXXXXGXXGGXXXRAGXXGGXXXXXEXRXFXXXGXGXGXXXG 425
G G G GG AG GG G G G G
Sbjct: 298 TG----GGGGLGGGAGGGLGGGAGAGGGLGGGAGAGGGGGLGGGAGGGGGLGGGAGGGLG 353
Query: 424 G 422
G
Sbjct: 354 G 354
Score = 29.9 bits (64), Expect = 3.1
Identities = 29/121 (23%), Positives = 31/121 (25%)
Frame = -3
Query: 784 GGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXGDXXDXXXXGXXGXXXX 605
GG+G GG G G G G GGG G G G G G
Sbjct: 192 GGLGSGAGGGGGLGGGAGGGGGLGGGAGGGLGGGAGGGG--GAGGGLGGGAGGGGGLGGG 249
Query: 604 XXXXMQXXVGXXGXRXX*XXXXXGXXGGXXXRAGXXGGXXXXXEXRXFXXXGXGXGXXXG 425
+ G G G G G GG G G G G
Sbjct: 250 AGGGLGGGAGGGGGLSGGAGGGLGGGAGAGGGGGLGGGTGGGGGLGGGTGGGGGLGGGAG 309
Query: 424 G 422
G
Sbjct: 310 G 310
Score = 29.9 bits (64), Expect = 3.1
Identities = 33/124 (26%), Positives = 34/124 (27%), Gaps = 3/124 (2%)
Frame = -3
Query: 784 GGVGXXDXXXGGSGRGXXGQXXFXGXLXXA---GGGGEXXDGXKGXGDXXDXXXXGXXGX 614
GG G GG+G G G G L GGGG G G G G G
Sbjct: 376 GGAGGGGGLGGGAGGGLGGGAGAGGGLGGGAGTGGGG-GLGGGAGGGGGLGGGAGGGLGG 434
Query: 613 XXXXXXXMQXXVGXXGXRXX*XXXXXGXXGGXXXRAGXXGGXXXXXEXRXFXXXGXGXGX 434
G G G GG G GG E G G G
Sbjct: 435 GAGAGGGFGGGAGAGG--------GGGLGGGAGGGGGLDGGAGGGAEAGGGFGGGAGAGT 486
Query: 433 XXGG 422
GG
Sbjct: 487 GGGG 490
Score = 29.5 bits (63), Expect = 4.1
Identities = 20/59 (33%), Positives = 21/59 (35%), Gaps = 3/59 (5%)
Frame = -3
Query: 784 GGVGXXDXXXGGSGRGXXGQXXFXGXLXX---AGGGGEXXDGXKGXGDXXDXXXXGXXG 617
GG G GG+G G G G L AGGGG G G G G G
Sbjct: 336 GGAGGGGGLGGGAGGGLGGGAGAGGGLGGGAGAGGGGGLGGGAGGGGGLGGGAGGGLGG 394
Score = 29.1 bits (62), Expect = 5.4
Identities = 22/83 (26%), Positives = 24/83 (28%)
Frame = -1
Query: 756 GGGVGGGXXXXSXXGXDWXXXXXGXKXXMG*RGXXIXXIXGXXGXXXXXXGGXXXCXAXL 577
GGG+GGG G G G G + G G GG A
Sbjct: 219 GGGLGGGAGGGGGAGGGLGGGAGGGGGLGGGAGGGLGGGAGGGGGLSGGAGGGLGGGAGA 278
Query: 576 GXWGXXXXXGXXXGGXGGAQXXG 508
G G GG GG G
Sbjct: 279 GGGGGLGGGTGGGGGLGGGTGGG 301
Score = 28.3 bits (60), Expect = 9.4
Identities = 33/130 (25%), Positives = 35/130 (26%), Gaps = 8/130 (6%)
Frame = -3
Query: 787 KGGVGXXDXXXGGSGRGXXG--------QXXFXGXLXXAGGGGEXXDGXKGXGDXXDXXX 632
K +G GG G G G F G L GG G G KG G
Sbjct: 33 KETLGGGGGFGGGGGFGGGGGLGGGGGAGGGFGGGLGHGGGLGGGFGGGKGGGLGGGGGL 92
Query: 631 XGXXGXXXXXXXXMQXXVGXXGXRXX*XXXXXGXXGGXXXRAGXXGGXXXXXEXRXFXXX 452
G G + G G G GG AG GG
Sbjct: 93 GGGGGAGGGFGGGLGHGGGLGGGFGGGKGGGLGGGGGLGGGAGGGGGLGSGGGLGGGAGG 152
Query: 451 GXGXGXXXGG 422
G G G GG
Sbjct: 153 GLGGGAGGGG 162
Score = 28.3 bits (60), Expect = 9.4
Identities = 30/125 (24%), Positives = 33/125 (26%), Gaps = 4/125 (3%)
Frame = -3
Query: 784 GGVGXXDXXXGGSGRGXXGQXXFXGXL--XXAGGGGEXXDGXKGXGDXXDXXXXGXXGXX 611
GG G GG+G G G G + GG G G G G G
Sbjct: 156 GGAGGGGGLGGGAGGGLGGGAGGGGGVGGGLGGGAGGGLGSGAGGGGGLGGGAGGGGGLG 215
Query: 610 XXXXXXMQXXVGXXGXRXX*XXXXXGXXGGXXXRA--GXXGGXXXXXEXRXFXXXGXGXG 437
+ G G G GG A G GG G G G
Sbjct: 216 GGAGGGLGGGAGGGGGAGGGLGGGAGGGGGLGGGAGGGLGGGAGGGGGLSGGAGGGLGGG 275
Query: 436 XXXGG 422
GG
Sbjct: 276 AGAGG 280
>06_03_0790 - 24636805-24637770
Length = 321
Score = 35.5 bits (78), Expect = 0.062
Identities = 21/61 (34%), Positives = 21/61 (34%)
Frame = -3
Query: 799 WGVPKGGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXGDXXDXXXXGXX 620
WGV GG G GG G G G G GGGG G G G G
Sbjct: 77 WGVWSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGG 136
Query: 619 G 617
G
Sbjct: 137 G 137
Score = 34.7 bits (76), Expect = 0.11
Identities = 20/56 (35%), Positives = 20/56 (35%)
Frame = -3
Query: 784 GGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXGDXXDXXXXGXXG 617
GG G GG GRG G G GGGG G GD D G G
Sbjct: 107 GGGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGGGGGGGGGGNGGDDGDNGDDGEDG 162
Score = 32.3 bits (70), Expect = 0.58
Identities = 19/56 (33%), Positives = 20/56 (35%)
Frame = -3
Query: 784 GGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXGDXXDXXXXGXXG 617
GG G GG G G G G GGGG G G G+ D G G
Sbjct: 104 GGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGGGGGGGGGGNGGDDGDNGDDG 159
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/61 (31%), Positives = 19/61 (31%)
Frame = -3
Query: 799 WGVPKGGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXGDXXDXXXXGXX 620
W GG G GG G G G G GGGG G G G G
Sbjct: 80 WSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGG 139
Query: 619 G 617
G
Sbjct: 140 G 140
Score = 29.5 bits (63), Expect = 4.1
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = -3
Query: 784 GGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXGDXXDXXXXGXXG 617
GG G GG G G G G GGGG G G G G G
Sbjct: 87 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGGGGG 142
Score = 29.5 bits (63), Expect = 4.1
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = -3
Query: 784 GGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXGDXXDXXXXGXXG 617
GG G GG G G G G GGGG G G G G G
Sbjct: 95 GGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGGGGGGGGGGNGG 150
Score = 29.5 bits (63), Expect = 4.1
Identities = 18/56 (32%), Positives = 19/56 (33%)
Frame = -3
Query: 784 GGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXGDXXDXXXXGXXG 617
GG G GG G G G G GGGG G G G + G G
Sbjct: 101 GGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGGGGGGGGGGNGGDDGDNG 156
Score = 28.7 bits (61), Expect = 7.1
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = -3
Query: 784 GGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXGDXXDXXXXGXXG 617
GG G GG G G G G GGGG G G G G G
Sbjct: 86 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGGGG 141
Score = 28.7 bits (61), Expect = 7.1
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = -3
Query: 784 GGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXGDXXDXXXXGXXG 617
GG G GG G G G G GGGG G G G G G
Sbjct: 94 GGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGGGGGGGGGGNG 149
Score = 28.7 bits (61), Expect = 7.1
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = -3
Query: 784 GGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXGDXXDXXXXGXXG 617
GG G GG G G G G GGGG G G G G G
Sbjct: 98 GGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGGGGGGGGGGNGGDDG 153
Score = 28.3 bits (60), Expect = 9.4
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = -3
Query: 832 WXSXGEXXXYFWGVPKGGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXG 653
W G G GG G GG G G G G GGGG G G G
Sbjct: 80 WSGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGG 139
Score = 28.3 bits (60), Expect = 9.4
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = -3
Query: 784 GGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXGDXXDXXXXGXXG 617
GG G GG G G G G GGGG G G G G G
Sbjct: 92 GGGGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGGGGGGGGGG 147
>07_03_0560 + 19479597-19480667
Length = 356
Score = 34.7 bits (76), Expect = 0.11
Identities = 18/44 (40%), Positives = 18/44 (40%)
Frame = -3
Query: 784 GGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXG 653
GG G GG G G G F G GGGG G KG G
Sbjct: 65 GGFGGDGGFGGGGGGGLGGGGGFGGGGGAGGGGGLGGGGGKGGG 108
Score = 34.7 bits (76), Expect = 0.11
Identities = 32/121 (26%), Positives = 34/121 (28%)
Frame = -3
Query: 784 GGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXGDXXDXXXXGXXGXXXX 605
GGVG GG G G G G GGGG+ +G G G G G
Sbjct: 154 GGVGGGSGTGGGLGGGGGGGFGGDGGGGLGGGGGK--EGGFGAGGGVGGGAGGGGGMGGG 211
Query: 604 XXXXMQXXVGXXGXRXX*XXXXXGXXGGXXXRAGXXGGXXXXXEXRXFXXXGXGXGXXXG 425
G G G GG G GG G G G G
Sbjct: 212 GGGGFGGGGGKGGGFGAGGGMGGGAGGGGGLGGGGGGGMGGGGGGGMGGGAGGGFGGGAG 271
Query: 424 G 422
G
Sbjct: 272 G 272
Score = 32.3 bits (70), Expect = 0.58
Identities = 35/127 (27%), Positives = 36/127 (28%), Gaps = 6/127 (4%)
Frame = -3
Query: 784 GGVGXXDXXXGG--SGRGXXGQXXFXGXLXXAGGGGEXXDG----XKGXGDXXDXXXXGX 623
GGVG GG +G G G G L GGGG DG G G G
Sbjct: 138 GGVGGGGGQGGGFGAGGGVGGGSGTGGGLGGGGGGGFGGDGGGGLGGGGGKEGGFGAGGG 197
Query: 622 XGXXXXXXXXMQXXVGXXGXRXX*XXXXXGXXGGXXXRAGXXGGXXXXXEXRXFXXXGXG 443
G M G G GG AG GG G G
Sbjct: 198 VGGGAGGGGGMGGGGGGGFGGGGGKGGGFGAGGGMGGGAGGGGGLGGGGGGGMGGGGGGG 257
Query: 442 XGXXXGG 422
G GG
Sbjct: 258 MGGGAGG 264
Score = 30.7 bits (66), Expect = 1.8
Identities = 30/119 (25%), Positives = 32/119 (26%)
Frame = -3
Query: 781 GVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXGDXXDXXXXGXXGXXXXX 602
G G GG G G G G L GG G G G G + G G
Sbjct: 74 GGGGGGGLGGGGGFGGGGGAGGGGGLGGGGGKGGGFGGGVGGGGGGEGGGLGGGGGGGLG 133
Query: 601 XXXMQXXVGXXGXRXX*XXXXXGXXGGXXXRAGXXGGXXXXXEXRXFXXXGXGXGXXXG 425
VG G + G GG G GG G G G G
Sbjct: 134 GGG-GGGVGGGGGQGGGFGAGGGVGGGSGTGGGLGGGGGGGFGGDGGGGLGGGGGKEGG 191
Score = 30.7 bits (66), Expect = 1.8
Identities = 32/125 (25%), Positives = 33/125 (26%)
Frame = -3
Query: 796 GVPKGGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXGDXXDXXXXGXXG 617
G KGG GG G G G L GGGG G +G G G G
Sbjct: 102 GGGKGGGFGGGVGGGGGGEGGGLGGGGGGGLGGGGGGGVGGGGGQGGGFGAGGGVGGGSG 161
Query: 616 XXXXXXXXMQXXVGXXGXRXX*XXXXXGXXGGXXXRAGXXGGXXXXXEXRXFXXXGXGXG 437
G G G GG G GG G G G
Sbjct: 162 TGGGLGGGGGGGFGGDGGGG--LGGGGGKEGGFGAGGGVGGGAGGGGGMGGGGGGGFGGG 219
Query: 436 XXXGG 422
GG
Sbjct: 220 GGKGG 224
Score = 30.7 bits (66), Expect = 1.8
Identities = 33/129 (25%), Positives = 35/129 (27%), Gaps = 2/129 (1%)
Frame = -3
Query: 802 FWGVPKGGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGE--XXDGXKGXGDXXDXXXX 629
F G GG+G GG G G G GGGG G KG G
Sbjct: 174 FGGDGGGGLGGGGGKEGGFGAGGGVGGGAGGGGGMGGGGGGGFGGGGGKGGGFGAGGGMG 233
Query: 628 GXXGXXXXXXXXMQXXVGXXGXRXX*XXXXXGXXGGXXXRAGXXGGXXXXXEXRXFXXXG 449
G G +G G G GG AG G G
Sbjct: 234 GGAGGGGGLGGGGGGGMGGGGGGGMGGGAGGGFGGGAGGGAGQGGSGGLGGGGGGGLGGG 293
Query: 448 XGXGXXXGG 422
G G GG
Sbjct: 294 GGAGGGLGG 302
>07_03_0558 + 19461369-19462448
Length = 359
Score = 34.7 bits (76), Expect = 0.11
Identities = 30/121 (24%), Positives = 31/121 (25%)
Frame = -3
Query: 784 GGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXGDXXDXXXXGXXGXXXX 605
GG+G GG G G G G GG G G G G G G
Sbjct: 129 GGLGGGGGFGGGGGGGLGGGGGHGGGFGAGGGVGGGAGGGVGGGGGFGGGGGGGLGGGHG 188
Query: 604 XXXXMQXXVGXXGXRXX*XXXXXGXXGGXXXRAGXXGGXXXXXEXRXFXXXGXGXGXXXG 425
VG G GG G GG G G G G
Sbjct: 189 GGFGGGAGVGGGAGGGVGGGGGFGGGGGSGLGGGQGGGFGAGGGAGGGIGGGGGFGGGGG 248
Query: 424 G 422
G
Sbjct: 249 G 249
Score = 30.3 bits (65), Expect = 2.3
Identities = 31/122 (25%), Positives = 33/122 (27%), Gaps = 1/122 (0%)
Frame = -3
Query: 784 GGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGG-GEXXDGXKGXGDXXDXXXXGXXGXXX 608
GG G + GG G G G G GGG G G G G G G
Sbjct: 44 GGFGEGEGFGGGGGFGGGGGGGLGGGGGGLGGGHGGGFGGGGGLGGGASGGVGGGGGFGG 103
Query: 607 XXXXXMQXXVGXXGXRXX*XXXXXGXXGGXXXRAGXXGGXXXXXEXRXFXXXGXGXGXXX 428
+ G G G GG G GG G G G
Sbjct: 104 GGGGGLGG--GQGGGFGGGAGAGGGAGGGLGGGGGFGGGGGGGLGGGGGHGGGFGAGGGV 161
Query: 427 GG 422
GG
Sbjct: 162 GG 163
Score = 29.5 bits (63), Expect = 4.1
Identities = 30/120 (25%), Positives = 32/120 (26%)
Frame = -3
Query: 784 GGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXGDXXDXXXXGXXGXXXX 605
GG G GG+G G G F G GGG G G G G G
Sbjct: 115 GGFGGGAGAGGGAGGGLGGGGGFGGGGGGGLGGGGGHGGGFGAGGGVGGGAGGGVGGGGG 174
Query: 604 XXXXMQXXVGXXGXRXX*XXXXXGXXGGXXXRAGXXGGXXXXXEXRXFXXXGXGXGXXXG 425
+G G G GG G GG G G G G
Sbjct: 175 FGGGGGGGLG--GGHGGGFGGGAGVGGGAGGGVGGGGGFGGGGGSGLGGGQGGGFGAGGG 232
Score = 28.7 bits (61), Expect = 7.1
Identities = 32/133 (24%), Positives = 33/133 (24%)
Frame = -3
Query: 820 GEXXXYFWGVPKGGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXGDXXD 641
GE + G GG G GG G G F G GG G G G
Sbjct: 47 GEGEGFGGGGGFGGGGGGGLGGGGGGLGGGHGGGFGGGGGLGGGASGGVGGGGGFGGGGG 106
Query: 640 XXXXGXXGXXXXXXXXMQXXVGXXGXRXX*XXXXXGXXGGXXXRAGXXGGXXXXXEXRXF 461
G G G G G GG G GG
Sbjct: 107 GGLGGGQGGGFGGGAGAGGGAG--GGLGGGGGFGGGGGGGLGGGGGHGGGFGAGGGVGGG 164
Query: 460 XXXGXGXGXXXGG 422
G G G GG
Sbjct: 165 AGGGVGGGGGFGG 177
>12_02_1174 - 26696869-26698191
Length = 440
Score = 33.9 bits (74), Expect = 0.19
Identities = 25/106 (23%), Positives = 27/106 (25%), Gaps = 3/106 (2%)
Frame = +1
Query: 472 PPPXXXXXXTXXPXPLXPPXXPXXXXXXXXVPPXXQXXXAXXXTXXXXXPXPPSAXNXXD 651
PPP P P PP P PP Q + P PP
Sbjct: 141 PPPVKPQPPPSLPPPPPPPPPPPPPRPPSVKPPVVQPKPQPPPSLQPPSPPPPPPTRPPS 200
Query: 652 XPPPSXHXXLXP---XXXXSPIXPXXTXXXXXPSHSPPXXNXXXQP 780
PP P SP P T P +P QP
Sbjct: 201 VKPPVVQPKPQPPPTLPPPSPPPPPPTVPPRTPGDTPAVVEPKPQP 246
>07_03_0559 + 19475893-19476783
Length = 296
Score = 33.5 bits (73), Expect = 0.25
Identities = 34/127 (26%), Positives = 35/127 (27%)
Frame = -3
Query: 802 FWGVPKGGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXGDXXDXXXXGX 623
F G GG+G GG G G G G L GGGG G G G G
Sbjct: 87 FGGGGGGGLGGGGCEGGGFGGGVGGGSGAGGGLGGGGGGG--FGGGSGGGVGGGGGQGGG 144
Query: 622 XGXXXXXXXXMQXXVGXXGXRXX*XXXXXGXXGGXXXRAGXXGGXXXXXEXRXFXXXGXG 443
G G G G GG G GG G G
Sbjct: 145 FGAGGGVGGGSGTGGGLGGGGG--GGFGGGGGGGIGGGGGKGGGFGAGGGVGGAAGGGGG 202
Query: 442 XGXXXGG 422
G GG
Sbjct: 203 MGSGGGG 209
Score = 31.9 bits (69), Expect = 0.76
Identities = 19/52 (36%), Positives = 22/52 (42%), Gaps = 2/52 (3%)
Frame = -3
Query: 802 FWGVPKGGVGXXDXXXGG--SGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXG 653
F G GG+G GG +G G G G + GGGG G KG G
Sbjct: 169 FGGGGGGGIGGGGGKGGGFGAGGGVGGAAGGGGGMGSGGGGGFGGGGGKGGG 220
Score = 30.3 bits (65), Expect = 2.3
Identities = 31/122 (25%), Positives = 32/122 (26%), Gaps = 2/122 (1%)
Frame = -3
Query: 784 GGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXGDXXDXXXXG--XXGXX 611
GG G GG G G G F G GGG G G G G G
Sbjct: 65 GGFGGGGGFRGGGGGGLGGGGGFGGGGGGGLGGGGCEGGGFGGGVGGGSGAGGGLGGGGG 124
Query: 610 XXXXXXMQXXVGXXGXRXX*XXXXXGXXGGXXXRAGXXGGXXXXXEXRXFXXXGXGXGXX 431
VG G + G GG G GG G G G
Sbjct: 125 GGFGGGSGGGVGGGGGQGGGFGAGGGVGGGSGTGGGLGGGGGGGFGGGGGGGIGGGGGKG 184
Query: 430 XG 425
G
Sbjct: 185 GG 186
Score = 30.3 bits (65), Expect = 2.3
Identities = 30/127 (23%), Positives = 31/127 (24%)
Frame = -3
Query: 802 FWGVPKGGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXGDXXDXXXXGX 623
F G GG+G GG G G G G GGG G G G
Sbjct: 73 FRGGGGGGLGGGGGFGGGGGGGLGGGGCEGGGFGGGVGGGSGAGGGLGGGGGGGFGGGSG 132
Query: 622 XGXXXXXXXXMQXXVGXXGXRXX*XXXXXGXXGGXXXRAGXXGGXXXXXEXRXFXXXGXG 443
G G G GG G GG G G
Sbjct: 133 GGVGGGGGQGGGFGAGGGVGGGSGTGGGLGGGGGGGFGGGGGGGIGGGGGKGGGFGAGGG 192
Query: 442 XGXXXGG 422
G GG
Sbjct: 193 VGGAAGG 199
>06_01_0178 + 1386981-1387505
Length = 174
Score = 33.5 bits (73), Expect = 0.25
Identities = 27/98 (27%), Positives = 27/98 (27%)
Frame = -3
Query: 784 GGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXGDXXDXXXXGXXGXXXX 605
GG G GG G G G G AGGGG G G G G
Sbjct: 40 GGGGGGGGGGGGGGAGGKGGKGGAGGHGGAGGGGGGGGGKGRKGGAGGHGGAGGGGGGGG 99
Query: 604 XXXXMQXXVGXXGXRXX*XXXXXGXXGGXXXRAGXXGG 491
G G G GG R G GG
Sbjct: 100 GKGRKGGRGGDGGSGGAGGRGGDGGSGGQGGRGGDGGG 137
Score = 28.7 bits (61), Expect = 7.1
Identities = 16/46 (34%), Positives = 16/46 (34%)
Frame = -3
Query: 754 GGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXGDXXDXXXXGXXG 617
GG GRG G G GGGG G G G G G
Sbjct: 19 GGRGRGGRGGRGGRGGASGGGGGGGGGGGGGGGGGAGGKGGKGGAG 64
Score = 28.7 bits (61), Expect = 7.1
Identities = 25/101 (24%), Positives = 26/101 (25%)
Frame = -3
Query: 796 GVPKGGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXGDXXDXXXXGXXG 617
G GG G GG G G G G GG G G G G G G
Sbjct: 33 GGASGGGGGGGGGGGGGGGGGAGGKGGKGGAGGHGGAGGGGGGGGGKGRKGGAGGHGGAG 92
Query: 616 XXXXXXXXMQXXVGXXGXRXX*XXXXXGXXGGXXXRAGXXG 494
G G G GG + G G
Sbjct: 93 GGGGGGGGKGRKGGRGGDGGSGGAGGRGGDGGSGGQGGRGG 133
>04_03_0904 + 20717005-20718087
Length = 360
Score = 33.5 bits (73), Expect = 0.25
Identities = 26/114 (22%), Positives = 32/114 (28%)
Frame = +3
Query: 414 HXXPPXXXPXPXPXXXXSRXSXXXXXPPHXPARXXXPPXXPXXXXX*XXRXPXXPTXXCX 593
H P P P P + PP+ P + P P P PT
Sbjct: 68 HKPPAYTPPKPTPTPPTYTPTPKPTPPPYTP-KPTPPAHTPTPPTYTPTPTPPKPTPPT- 125
Query: 594 XXHXXXXXPXXPXXXXSXXSPXPFXPSXXSPPPPAXXNXPXXHXXPXXPLPLPP 755
+ P P +P + P PPP P P P P PP
Sbjct: 126 --YKPQPKPT-PAPYTPTPTPPTYKPQPKPTPPPTYKPQPKPTPTPYTPTPTPP 176
Score = 28.7 bits (61), Expect = 7.1
Identities = 27/116 (23%), Positives = 32/116 (27%)
Frame = +3
Query: 408 TXHXXPPXXXPXPXPXXXXSRXSXXXXXPPHXPARXXXPPXXPXXXXX*XXRXPXXPTXX 587
T PP P P P + P P + P P P PT
Sbjct: 88 TPKPTPPPYTPKPTPPAHTP--TPPTYTPTPTPPKPTPPTYKPQPKPT---PAPYTPTPT 142
Query: 588 CXXXHXXXXXPXXPXXXXSXXSPXPFXPSXXSPPPPAXXNXPXXHXXPXXPLPLPP 755
+ P P P P P +P PP+ P P P P PP
Sbjct: 143 -PPTYKPQPKPTPPPTYKPQPKPTP-TPYTPTPTPPSYKPQPKPTPTPYTPTPTPP 196
>08_01_0375 -
3307206-3307316,3307870-3307965,3308061-3308132,
3308247-3308315,3308427-3308513,3308753-3308858,
3309118-3309237,3309327-3309406,3309497-3309878,
3310746-3310814,3311460-3312202
Length = 644
Score = 32.7 bits (71), Expect = 0.44
Identities = 25/94 (26%), Positives = 27/94 (28%), Gaps = 3/94 (3%)
Frame = +2
Query: 509 PXXXAPPXPPXXXPLXXXXPXLPNXALHXXXPPXXXXXX--PXXPXIXXIXXPLXPIXXF 682
P PP PP P P P H P P P P P F
Sbjct: 14 PQGGFPPQPPPMNPYGPPPPQQPAYG-HMPPPQGAPPPFLAPPPPPPPGPPPPHQPQFNF 72
Query: 683 XPXXXXXQSXPKX-LLXXXPPPTPPPXXIXXXNP 781
P Q P + PPP PPP + P
Sbjct: 73 GPGPPQQQQPPPPPQMYYQPPPPPPPYGVNSSQP 106
Score = 28.7 bits (61), Expect = 7.1
Identities = 28/116 (24%), Positives = 31/116 (26%), Gaps = 1/116 (0%)
Frame = +1
Query: 457 PXXXAPPPXXXXXXTXXPXPLXPPXXPXXXXXXXXVPPXXQXXXAXXXTXXXXXPXPPS- 633
P APPP P P PP PP Q P PP
Sbjct: 43 PPQGAPPPFLAPPP---PPPPGPPPPHQPQFNFGPGPPQQQQPPPPPQMYYQPPPPPPPY 99
Query: 634 AXNXXDXPPPSXHXXLXPXXXXSPIXPXXTXXXXXPSHSPPXXNXXXQPRLSVLPK 801
N PPP P P P T + P Q + S LP+
Sbjct: 100 GVNSSQPPPPPPPPPSPPPSAPPPPPPPPTQPPPREAQLAPPPPREQQSK-SALPR 154
>07_03_1751 - 29215074-29216270
Length = 398
Score = 32.7 bits (71), Expect = 0.44
Identities = 32/121 (26%), Positives = 33/121 (27%)
Frame = -3
Query: 784 GGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXGDXXDXXXXGXXGXXXX 605
GG+G GG G G G G L GGGG G G G G
Sbjct: 103 GGIGHGGGVGGGFGGGKGGGLGGGGGLGGGGGGGAGGGLGGGAGGGAGAGVGGGAGAGGG 162
Query: 604 XXXXMQXXVGXXGXRXX*XXXXXGXXGGXXXRAGXXGGXXXXXEXRXFXXXGXGXGXXXG 425
G G G GG AG GG G G G G
Sbjct: 163 AGGGGGLGGGAGGGAGGGLGGGSGGGGGLGGGAG--GGAGVGGGAGGGAGGGGGLGGGAG 220
Query: 424 G 422
G
Sbjct: 221 G 221
Score = 32.7 bits (71), Expect = 0.44
Identities = 30/120 (25%), Positives = 32/120 (26%)
Frame = -3
Query: 784 GGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXGDXXDXXXXGXXGXXXX 605
GG G GG+G G G G L GGG G G G G G
Sbjct: 165 GGGGLGGGAGGGAGGGLGGGSGGGGGLGGGAGGGAGVGGGAGGGAGGGGGLGGGAGGGAG 224
Query: 604 XXXXMQXXVGXXGXRXX*XXXXXGXXGGXXXRAGXXGGXXXXXEXRXFXXXGXGXGXXXG 425
+ G G G GG G GG G G G G
Sbjct: 225 GGGGLGGGAG--GGHGGGGGLGGGAGGGAGVGGGAGGGAGAGGGLGAGGGAGGGGGIGGG 282
Score = 31.5 bits (68), Expect = 1.0
Identities = 31/127 (24%), Positives = 33/127 (25%)
Frame = -3
Query: 802 FWGVPKGGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXGDXXDXXXXGX 623
F G GG+G GG G G F G GGG G G G
Sbjct: 87 FGGGKGGGLGGGVGVGGGIGHGGGVGGGFGGGKGGGLGGGGGLGGGGGGGAGGGLGGGAG 146
Query: 622 XGXXXXXXXXMQXXVGXXGXRXX*XXXXXGXXGGXXXRAGXXGGXXXXXEXRXFXXXGXG 443
G G G G GG +G GG G G
Sbjct: 147 GGAGAGVGGGAGAGGGAGGGGGLGGGAGGGAGGGLGGGSGGGGGLGGGAGGGAGVGGGAG 206
Query: 442 XGXXXGG 422
G GG
Sbjct: 207 GGAGGGG 213
Score = 29.1 bits (62), Expect = 5.4
Identities = 17/56 (30%), Positives = 18/56 (32%)
Frame = -3
Query: 784 GGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXGDXXDXXXXGXXG 617
GG G GG+G G F G GGG G G G G G
Sbjct: 271 GGAGGGGGIGGGAGGGAGAGGGFGGGKGGGFGGGGGGGGGAGAGGGFGGGKGGGFG 326
Score = 28.7 bits (61), Expect = 7.1
Identities = 17/48 (35%), Positives = 19/48 (39%)
Frame = -3
Query: 796 GVPKGGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXG 653
G+ GG G GG G G G G + GG G G KG G
Sbjct: 76 GLGHGG-GIGGGFGGGKGGGLGGGVGVGGGIGHGGGVGGGFGGGKGGG 122
>01_01_0570 - 4231100-4232560
Length = 486
Score = 32.7 bits (71), Expect = 0.44
Identities = 32/121 (26%), Positives = 33/121 (27%), Gaps = 1/121 (0%)
Frame = -3
Query: 784 GGVGXXDXXXGGSG-RGXXGQXXFXGXLXXAGGGGEXXDGXKGXGDXXDXXXXGXXGXXX 608
GGVG GG G G G G GGGG G G G G G
Sbjct: 57 GGVGVGGGEGGGVGVGGGVGGGTGGGAAGGLGGGGGGGGGLGGSGGLGGGGMGGSGGFGG 116
Query: 607 XXXXXMQXXVGXXGXRXX*XXXXXGXXGGXXXRAGXXGGXXXXXEXRXFXXXGXGXGXXX 428
+ VG G GG AG GG G G G
Sbjct: 117 GGGGGVGGGVGAGFGSGGGVGAGGGLRGGGGVGAGGGGGFGGGAGGGGGIGAGGGFGGGA 176
Query: 427 G 425
G
Sbjct: 177 G 177
Score = 31.9 bits (69), Expect = 0.76
Identities = 32/121 (26%), Positives = 33/121 (27%)
Frame = -3
Query: 784 GGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXGDXXDXXXXGXXGXXXX 605
GGVG GG G G G G GGGGE G G G G G
Sbjct: 180 GGVGGGGRF-GGGGMGGGGGFG-GGAGGGVGGGGELGGGGMGGGSGFGGGAGGGFGAGGG 237
Query: 604 XXXXMQXXVGXXGXRXX*XXXXXGXXGGXXXRAGXXGGXXXXXEXRXFXXXGXGXGXXXG 425
+ G G G G G GG G G G G
Sbjct: 238 VGGGIGVGGGMGGGASGGIGGGAGGGMGGDIGGGAGGGVGGGGGGGMGGGGGFGGGGGVG 297
Query: 424 G 422
G
Sbjct: 298 G 298
Score = 29.1 bits (62), Expect = 5.4
Identities = 17/39 (43%), Positives = 18/39 (46%)
Frame = -3
Query: 784 GGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDG 668
GG+G GGSG G G G AGGGGE G
Sbjct: 432 GGIGASRGARGGSGAG-GGAGMGGGVGARAGGGGEHKRG 469
>08_01_0059 - 394001-394708
Length = 235
Score = 31.9 bits (69), Expect = 0.76
Identities = 18/65 (27%), Positives = 21/65 (32%)
Frame = +3
Query: 561 RXPXXPTXXCXXXHXXXXXPXXPXXXXSXXSPXPFXPSXXSPPPPAXXNXPXXHXXPXXP 740
R P P P P +P P+ P PPP P H P P
Sbjct: 9 RAPPPPATPPPPPRRAPPPPSPPIRPPPPPTPRPYAP----PPPSHPLAPPPPHISPPAP 64
Query: 741 LPLPP 755
+P PP
Sbjct: 65 VPPPP 69
Score = 28.3 bits (60), Expect = 9.4
Identities = 22/81 (27%), Positives = 25/81 (30%)
Frame = +2
Query: 524 PPXPPXXXPLXXXXPXLPNXALHXXXPPXXXXXXPXXPXIXXIXXPLXPIXXFXPXXXXX 703
PP PP P P P PP P P P P P
Sbjct: 3 PPPPPRRAP---PPPATPPPPPRRAPPPPSPPIRPPPPPTPRPYAPPPPSHPLAPPPPHI 59
Query: 704 QSXPKXLLXXXPPPTPPPXXI 766
S P + PPP+PPP +
Sbjct: 60 -SPPAPV---PPPPSPPPHIV 76
>03_02_0539 - 9329572-9330729,9330988-9331041
Length = 403
Score = 31.5 bits (68), Expect = 1.0
Identities = 17/44 (38%), Positives = 20/44 (45%)
Frame = -3
Query: 799 WGVPKGGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDG 668
WG GG G D GG+G G F G +GGGG+ G
Sbjct: 360 WGNNNGGNGGSDG--GGNGGGGSWTMNFPGFHSSSGGGGDDGGG 401
>10_01_0100 +
1209424-1209538,1210373-1211073,1211158-1211379,
1211452-1211878,1212091-1213219,1213623-1213746,
1214207-1214278,1215480-1215578,1215617-1215640,
1215704-1215745,1215815-1215895,1215983-1216114,
1216115-1216196,1216271-1216365,1218499-1218570,
1218676-1218792,1219379-1219447,1219521-1219587,
1219886-1220025
Length = 1269
Score = 31.1 bits (67), Expect = 1.3
Identities = 29/117 (24%), Positives = 30/117 (25%), Gaps = 6/117 (5%)
Frame = +3
Query: 423 PPXXXPXPXPXXXXSRXSXXXXXPPHXPARXXXPPXXPXXXXX*XXRXPXXPTXXCXXXH 602
PP P P P PP P R PP P P P
Sbjct: 586 PPPPPPPPLPNCLVPSPPPPPPPPPILPNRSVPPPPPPPPPLPNHSVLPPPPPPPPPPSL 645
Query: 603 XXXXXPXXPXXXXSXXSPXPFXPSXXSPPPPAXXNXP------XXHXXPXXPLPLPP 755
P P P P P PPP + P P P PLPP
Sbjct: 646 PNRLVPPPPAPGIGNKFPAPPPP---PPPPRSSSRTPTGAATSSKGPPPPPPPPLPP 699
Score = 30.7 bits (66), Expect = 1.8
Identities = 30/118 (25%), Positives = 33/118 (27%), Gaps = 7/118 (5%)
Frame = +3
Query: 423 PPXXXPXPXPXXXXSRXSXXXXXPPHXP-------ARXXXPPXXPXXXXX*XXRXPXXPT 581
PP P P P S + PP P PP P P P
Sbjct: 564 PPPPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPPPPPILPNRSVPPPPPP 623
Query: 582 XXCXXXHXXXXXPXXPXXXXSXXSPXPFXPSXXSPPPPAXXNXPXXHXXPXXPLPLPP 755
H P P P P P+ PPPPA + P P P PP
Sbjct: 624 PPPLPNHSVLPPPPPP-------PPPPSLPNRLVPPPPAPG---IGNKFPAPPPPPPP 671
Score = 30.3 bits (65), Expect = 2.3
Identities = 20/78 (25%), Positives = 22/78 (28%)
Frame = +2
Query: 524 PPXPPXXXPLXXXXPXLPNXALHXXXPPXXXXXXPXXPXIXXIXXPLXPIXXFXPXXXXX 703
PP PP PL PP P P P+ P P
Sbjct: 566 PPPPPPPPPLPQSNYASSQPPPPPPPPPLPNCLVPSPPPPPP-PPPILPNRSVPPPPPPP 624
Query: 704 QSXPKXLLXXXPPPTPPP 757
P + PPP PPP
Sbjct: 625 PPLPNHSVLPPPPPPPPP 642
Score = 29.5 bits (63), Expect = 4.1
Identities = 27/111 (24%), Positives = 31/111 (27%), Gaps = 1/111 (0%)
Frame = +3
Query: 426 PXXXPXPXPXXXXSRXSXXXXXPPHXPARXXXPPXXPXXXXX*XXRXPXXPTXXCXXXHX 605
P P P P ++ + PP P PP P P P
Sbjct: 544 PPPPPPPPPPPSGNKPAFSPPPPPPPPP----PPPLPQSNYASSQPPPPPPPPPLPNCLV 599
Query: 606 XXXXPXXPXXXXSXXSPXPFXPSX-XSPPPPAXXNXPXXHXXPXXPLPLPP 755
P P P P P+ PPPP P P P P PP
Sbjct: 600 PSPPPPPP--------PPPILPNRSVPPPPPPPPPLPNHSVLPPPPPPPPP 642
Score = 28.7 bits (61), Expect = 7.1
Identities = 25/114 (21%), Positives = 28/114 (24%), Gaps = 1/114 (0%)
Frame = +3
Query: 408 TXHXXPPXXXPXPXPXXXXSRXSXXXXXPPHXPARXXXPPXXPXXXXX*XXRXPXXPTXX 587
T PP P P P + PP P PP P P
Sbjct: 684 TSSKGPPPPPPPPLPPANRTNGPGVPSAPPPPPP----PPPANRSNGPSAPAPPLPPPLP 739
Query: 588 CXXXHXXXXXPXXPXXXXSXXSPXPFXPSXXSPPPP-AXXNXPXXHXXPXXPLP 746
P P +P P P +P PP P H P P
Sbjct: 740 AAANKRNPPAPPPPPLMTGKKAPAPPPPPPQAPKPPGTVPPPPPLHGASGRPHP 793
Score = 28.3 bits (60), Expect = 9.4
Identities = 29/121 (23%), Positives = 30/121 (24%), Gaps = 11/121 (9%)
Frame = +3
Query: 426 PXXXPXPXPXXXXSRXSXXXXXPPHXPA---RXXXPPXXPXXXXX*XXRXPXXPTXXCXX 596
P P P P S PP P PP P R P
Sbjct: 600 PSPPPPPPPPPILPNRSVPPPPPPPPPLPNHSVLPPPPPPPPPPSLPNRLVPPPPAPGIG 659
Query: 597 XHXXXXXPXXPXXXXSXXSPXPFXPSXXSPPPPAXX--------NXPXXHXXPXXPLPLP 752
P P S +P S PPPP N P P P P P
Sbjct: 660 NKFPAPPPPPPPPRSSSRTPTGAATSSKGPPPPPPPPLPPANRTNGPGVPSAPPPPPPPP 719
Query: 753 P 755
P
Sbjct: 720 P 720
>01_01_0446 +
3321832-3322232,3322398-3322455,3322810-3323748,
3324504-3324654,3324740-3324818,3325826-3325934
Length = 578
Score = 31.1 bits (67), Expect = 1.3
Identities = 17/49 (34%), Positives = 19/49 (38%)
Frame = -3
Query: 799 WGVPKGGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXG 653
+G GG G GG GRG G + G GGG G G G
Sbjct: 71 YGGGGGGYGGGGGGYGGGGRGGGGGGGYGGGGGGGRGGGGGGGGRGGGG 119
Score = 28.3 bits (60), Expect = 9.4
Identities = 19/56 (33%), Positives = 19/56 (33%)
Frame = -3
Query: 820 GEXXXYFWGVPKGGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXG 653
G Y G GG G GG G G G G GGGG G G G
Sbjct: 57 GGGGGYGGGGVGGGYGGGGGGYGGGGGGYGGGGRGGGGGGGYGGGGGGGRGGGGGG 112
Score = 28.3 bits (60), Expect = 9.4
Identities = 17/49 (34%), Positives = 17/49 (34%)
Frame = -3
Query: 796 GVPKGGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXGD 650
G GG G GG G G G G GGGG G G D
Sbjct: 77 GYGGGGGGYGGGGRGGGGGGGYGGGGGGGRGGGGGGGGRGGGGRGGGRD 125
>03_05_0732 -
27232299-27232535,27232717-27232746,27233094-27233155,
27233975-27234005,27234618-27234713,27234881-27234969,
27235687-27236263
Length = 373
Score = 27.1 bits (57), Expect(2) = 1.3
Identities = 11/22 (50%), Positives = 13/22 (59%)
Frame = +2
Query: 737 PPPTPPPXXIXXXNPAFRYSPK 802
PPP PPP P FR+SP+
Sbjct: 81 PPPPPPPMGAPGFGP-FRWSPR 101
Score = 22.6 bits (46), Expect(2) = 1.3
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = +2
Query: 722 LLXXXPPPTPPP 757
LL PPP PPP
Sbjct: 49 LLPHQPPPPPPP 60
>12_01_0838 - 7830944-7831444
Length = 166
Score = 30.7 bits (66), Expect = 1.8
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = -3
Query: 784 GGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXG 653
GG G GGSG+G + GGGG DG G G
Sbjct: 113 GGGGGGGGGGGGSGQGSGSGYGYGYGKGGGGGGGGGGDGGGGGG 156
>07_03_0177 - 14770777-14772045
Length = 422
Score = 30.7 bits (66), Expect = 1.8
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = -3
Query: 784 GGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXGDXXDXXXXGXXG 617
GG G GG G G G G GGGG G G G G G
Sbjct: 59 GGYGKGGGFGGGGGGGGGGGFGGGGGFGGGGGGGLGGGGGGGLGGGGGFGKGGGVG 114
Score = 30.3 bits (65), Expect = 2.3
Identities = 29/120 (24%), Positives = 31/120 (25%)
Frame = -3
Query: 784 GGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXGDXXDXXXXGXXGXXXX 605
GG+G GG G+G F GGGG G G G G G
Sbjct: 199 GGLGGGGGLGGGIGKGGGLGGGFGKGGGLGGGGGLGGGGGLGGGIGKGGGLGGGIGKGGG 258
Query: 604 XXXXMQXXVGXXGXRXX*XXXXXGXXGGXXXRAGXXGGXXXXXEXRXFXXXGXGXGXXXG 425
G G G GG G GG G G G G
Sbjct: 259 LGGGFGKGGGLGGGGGLGGGEDGGLGGGIGKGGGIGGGFGKGGGLGGGGGLGGGGGLGGG 318
>03_05_0630 + 26260159-26260272,26260520-26260894
Length = 162
Score = 30.7 bits (66), Expect = 1.8
Identities = 18/53 (33%), Positives = 21/53 (39%)
Frame = -3
Query: 799 WGVPKGGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXGDXXD 641
+G +GG G GG GR G G GGGG G +G G D
Sbjct: 103 YGGGRGGGGYGGGGGGGYGRREGGYGGGGGYGGGRGGGGGGYGGSRGGGYGGD 155
>08_01_0003 + 30085-30195,30289-30365,31080-31136,31668-33560,
33643-34147,34250-34358,34436-34548,34619-34806,
35481-36129,36169-36691,36760-36911,37042-37141,
37301-37416
Length = 1530
Score = 30.3 bits (65), Expect = 2.3
Identities = 24/83 (28%), Positives = 26/83 (31%), Gaps = 5/83 (6%)
Frame = +2
Query: 524 PPXP---PXXXPLXXXXPXLPNXA--LHXXXPPXXXXXXPXXPXIXXIXXPLXPIXXFXP 688
PP P P PL P LP+ + PP P P P P P
Sbjct: 1130 PPLPLDAPPPPPLPEGPPPLPSDSPPCQPPLPPSPPPATPPPPPPLSPSLPPPPPPPPLP 1189
Query: 689 XXXXXQSXPKXLLXXXPPPTPPP 757
Q P L PP PPP
Sbjct: 1190 SGPPPQPAPPPLPIQPPPIPPPP 1212
Score = 28.7 bits (61), Expect = 7.1
Identities = 14/46 (30%), Positives = 16/46 (34%)
Frame = +3
Query: 618 PXXPXXXXSXXSPXPFXPSXXSPPPPAXXNXPXXHXXPXXPLPLPP 755
P P P P P +PPPP + P PLP P
Sbjct: 1147 PPLPSDSPPCQPPLPPSPPPATPPPPPPLSPSLPPPPPPPPLPSGP 1192
>06_03_1506 + 30641428-30642168
Length = 246
Score = 30.3 bits (65), Expect = 2.3
Identities = 19/56 (33%), Positives = 21/56 (37%)
Frame = -3
Query: 820 GEXXXYFWGVPKGGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXG 653
G Y +G GG G GGSG G G G +GGG G G G
Sbjct: 127 GYGSGYDYGGQGGGGGHGGGGGGGSGYGNGGYGSGFGEGYGSGGGVNGGGGSGGGG 182
>02_05_0686 - 30900748-30902167,30903442-30904742
Length = 906
Score = 30.3 bits (65), Expect = 2.3
Identities = 14/46 (30%), Positives = 17/46 (36%)
Frame = +3
Query: 618 PXXPXXXXSXXSPXPFXPSXXSPPPPAXXNXPXXHXXPXXPLPLPP 755
P P + +P P P +PPPP P P P PP
Sbjct: 314 PPPPPPKPAAAAPPPPPPPKAAPPPPPPKGPPPPPPAKGPPPPPPP 359
Score = 28.3 bits (60), Expect = 9.4
Identities = 14/35 (40%), Positives = 15/35 (42%)
Frame = +3
Query: 651 SPXPFXPSXXSPPPPAXXNXPXXHXXPXXPLPLPP 755
+P P P PPPPA P P P P PP
Sbjct: 335 APPPPPPKGPPPPPPA--KGPPPPPPPKGPSPPPP 367
>01_05_0070 - 17842347-17842643
Length = 98
Score = 30.3 bits (65), Expect = 2.3
Identities = 16/44 (36%), Positives = 18/44 (40%)
Frame = -3
Query: 784 GGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXG 653
GGV D G G G G+ G GGG E +G G G
Sbjct: 49 GGVAGVDGGCAGLGGGGVGRRRLGGGGRLGGGGLELGEGGVGEG 92
>12_02_0299 - 17051570-17052474,17053542-17053755
Length = 372
Score = 29.9 bits (64), Expect = 3.1
Identities = 25/83 (30%), Positives = 27/83 (32%), Gaps = 4/83 (4%)
Frame = +2
Query: 521 APPXPPXXXPLXXXXPXLPNXAL-HXXXPPXXXXXXPXXPXIXXIXXP---LXPIXXFXP 688
+PP P PL P P A PP P P P L P+ F P
Sbjct: 254 SPPPPAFPFPLPPW-PWAPPPAFPFPHLPPIFSPPSPPPPPPPAFPFPFPQLPPLPHFPP 312
Query: 689 XXXXXQSXPKXLLXXXPPPTPPP 757
S P PPP PPP
Sbjct: 313 LPSFYPSPPP---PPPPPPPPPP 332
Score = 28.3 bits (60), Expect = 9.4
Identities = 24/88 (27%), Positives = 25/88 (28%), Gaps = 5/88 (5%)
Frame = +2
Query: 509 PXXXAPPXP-----PXXXPLXXXXPXLPNXALHXXXPPXXXXXXPXXPXIXXIXXPLXPI 673
P PP P P P+ P P L PP P P PL P
Sbjct: 210 PPWPWPPIPFCTPRPWFPPIPFLTPP-PPPFLPFPLPPIPFLTPPSPPP-PAFPFPLPPW 267
Query: 674 XXFXPXXXXXQSXPKXLLXXXPPPTPPP 757
P P PPP PPP
Sbjct: 268 PWAPPPAFPFPHLPPIFSPPSPPPPPPP 295
>04_04_1149 + 31273203-31273695,31274016-31275165,31275617-31277078
Length = 1034
Score = 29.9 bits (64), Expect = 3.1
Identities = 16/43 (37%), Positives = 18/43 (41%)
Frame = -3
Query: 787 KGGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKG 659
+GG G G GRG G G AGGGG G +G
Sbjct: 5 RGGGGRGRGRGRGGGRGGGGGDGRGGGYGGAGGGGVGGRGGRG 47
>11_06_0610 - 25449085-25453284
Length = 1399
Score = 29.5 bits (63), Expect = 4.1
Identities = 30/120 (25%), Positives = 33/120 (27%), Gaps = 10/120 (8%)
Frame = +3
Query: 423 PPXXXPXPXPXXXXSRXSXXXXXPPHXPARXXXPPXXPXXXXX*XXRXPXXPTXXCXXXH 602
PP P P S PPH P PP P P H
Sbjct: 1025 PPAEKSQPPPSPVESVLPPVKSSPPHAPVISEPPPTKSSPPQVPVTSEP--PPAKSSPPH 1082
Query: 603 XXXXXPXXPXXXXSXXSP----XPFXPSXXSP------PPPAXXNXPXXHXXPXXPLPLP 752
P P +P P P SP PPPA + P P P P+P
Sbjct: 1083 EPISPPETPEKSYPPSTPEESSPPSVPKASSPPTEKSLPPPATVSLPPPTVKPLPP-PVP 1141
Score = 29.5 bits (63), Expect = 4.1
Identities = 24/103 (23%), Positives = 25/103 (24%), Gaps = 3/103 (2%)
Frame = +1
Query: 457 PXXXAPPPXXXXXXTXXPXPLXPPXXPXXXXXXXXVPPXXQXXXAXXXTXXXXXPXPP-- 630
P +PPP P PP P P P P
Sbjct: 1147 PPEKSPPPPAPVILPPPPIKSPPPPAPVISPPPPVKSPPPPAPVILPPPPVKSPPPPAPV 1206
Query: 631 -SAXNXXDXPPPSXHXXLXPXXXXSPIXPXXTXXXXXPSHSPP 756
S PPP L P SP P P SPP
Sbjct: 1207 ISPPPPVKSPPPPAPVILPPPPVKSPPPPAPVISPPPPEKSPP 1249
>10_01_0026 - 351737-353443
Length = 568
Score = 29.5 bits (63), Expect = 4.1
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = +3
Query: 642 SXXSPXPFXPSXXSPPPPAXXNXP 713
S S P PS SPPPPA N P
Sbjct: 24 SSLSKSPSPPSPSSPPPPASTNAP 47
>06_03_1326 - 29355467-29355817
Length = 116
Score = 29.5 bits (63), Expect = 4.1
Identities = 15/42 (35%), Positives = 17/42 (40%)
Frame = -3
Query: 784 GGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKG 659
GG G GG G+G G G GGGG G +G
Sbjct: 9 GGGGKGGGGGGGGGKGGGGGSGGGGRSGGGGGGGGGKGGGEG 50
Score = 29.5 bits (63), Expect = 4.1
Identities = 16/44 (36%), Positives = 17/44 (38%)
Frame = -3
Query: 784 GGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXG 653
GG G GG G G G+ G GGGE G G G
Sbjct: 15 GGGGGGGGKGGGGGSGGGGRSGGGGGGGGGKGGGEGGSGKYGGG 58
Score = 28.3 bits (60), Expect = 9.4
Identities = 17/45 (37%), Positives = 19/45 (42%)
Frame = -3
Query: 784 GGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXGD 650
GG G GG G G G G +GGGG G KG G+
Sbjct: 6 GGGGGGGKGGGGGGGGGKGGGGGSGGGGRSGGGG-GGGGGKGGGE 49
>08_02_1084 - 24232968-24234779
Length = 603
Score = 29.1 bits (62), Expect = 5.4
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +3
Query: 654 PXPFXPSXXSPPPPAXXNXPXXHXXPXXPLPLP 752
P PS PPPP P H P P PLP
Sbjct: 69 PQKQPPSQQLPPPPQQQQPPPQHSLPPPP-PLP 100
>04_04_1641 +
34993807-34994589,34994924-34995022,34995521-34995648,
34996095-34996235,34996456-34996542,34996627-34996780,
34998569-34998628,34999019-34999447,34999524-34999819,
35000278-35000407,35000690-35001187
Length = 934
Score = 29.1 bits (62), Expect = 5.4
Identities = 13/35 (37%), Positives = 14/35 (40%)
Frame = +3
Query: 651 SPXPFXPSXXSPPPPAXXNXPXXHXXPXXPLPLPP 755
S PF PPPP+ P P P P PP
Sbjct: 29 SAAPFRRPSPPPPPPSPVPSPAPPPPPHRPSPSPP 63
>04_03_0098 + 11183039-11183752
Length = 237
Score = 29.1 bits (62), Expect = 5.4
Identities = 17/56 (30%), Positives = 18/56 (32%)
Frame = -3
Query: 784 GGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXGDXXDXXXXGXXG 617
GG G GGSG G G G + GG G G G G G
Sbjct: 171 GGSGGGGASGGGSGTGRSGNAVGTGQGSGSANGGTGSGGGSGSGSGQGGSAGGGGG 226
>02_04_0400 - 22608519-22608844,22609044-22609122
Length = 134
Score = 29.1 bits (62), Expect = 5.4
Identities = 19/60 (31%), Positives = 19/60 (31%)
Frame = -3
Query: 796 GVPKGGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXGDXXDXXXXGXXG 617
G GG G GG G G G G GGGG G G G G G
Sbjct: 32 GCGGGGGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGGGGGGGGGGG 91
Score = 28.7 bits (61), Expect = 7.1
Identities = 18/56 (32%), Positives = 18/56 (32%)
Frame = -3
Query: 784 GGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXGDXXDXXXXGXXG 617
GG G GG G G G G GGGG G G G G G
Sbjct: 37 GGGGGGGGGGGGGGGGGGGGGGGGGGGRGGGGGGGGGGGGGGGGGGGGGGGGGGGG 92
>02_04_0567 -
23914330-23914461,23915016-23915136,23915954-23916048,
23916131-23916301,23917291-23917380,23917636-23918139
Length = 370
Score = 25.0 bits (52), Expect(2) = 6.4
Identities = 8/18 (44%), Positives = 11/18 (61%)
Frame = +2
Query: 737 PPPTPPPXXIXXXNPAFR 790
PPP PPP + +P +R
Sbjct: 50 PPPPPPPLEVVSPSPRWR 67
Score = 22.2 bits (45), Expect(2) = 6.4
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = +2
Query: 713 PKXLLXXXPPPTPPP 757
P L PPP PPP
Sbjct: 32 PFTFLCPPPPPPPPP 46
>03_06_0427 -
33857008-33857137,33857224-33857258,33857966-33858046,
33858213-33858338,33858410-33858568,33858797-33858934,
33859084-33859155,33859359-33860273
Length = 551
Score = 28.7 bits (61), Expect = 7.1
Identities = 16/44 (36%), Positives = 16/44 (36%)
Frame = -3
Query: 784 GGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKGXG 653
GG G GG G G G G GGGG G G G
Sbjct: 42 GGGGGGGGGSGGGGGGGGGGGGGGGSGGGCGGGGGGGGGSSGGG 85
Score = 28.3 bits (60), Expect = 9.4
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -3
Query: 784 GGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKG 659
GG G GG G G G G GGGG G G
Sbjct: 45 GGGGGGSGGGGGGGGGGGGGGGSGGGCGGGGGGGGGSSGGGG 86
>03_01_0023 + 198414-198968
Length = 184
Score = 28.7 bits (61), Expect = 7.1
Identities = 16/42 (38%), Positives = 16/42 (38%)
Frame = -3
Query: 784 GGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGGGEXXDGXKG 659
GG G GGSG G G G GGGG G G
Sbjct: 56 GGSGGGSGGGGGSGGGGSGGGGSGGGGSGGGGGGGSGGGGGG 97
Score = 28.3 bits (60), Expect = 9.4
Identities = 17/45 (37%), Positives = 18/45 (40%), Gaps = 1/45 (2%)
Frame = -3
Query: 784 GGVGXXDXXXGGSGR-GXXGQXXFXGXLXXAGGGGEXXDGXKGXG 653
GG G GG GR G G G +GGGG G G G
Sbjct: 38 GGGGGGGGGGGGGGRGGGGGSGGGSGGGGGSGGGGSGGGGSGGGG 82
>12_01_0269 + 1965126-1965169,1965398-1966064,1966181-1966693
Length = 407
Score = 28.3 bits (60), Expect = 9.4
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 651 SPXPFXPSXXSPPPPAXXNXPXXH 722
SP P PS SPPPP P H
Sbjct: 331 SPSPPFPSPPSPPPPPTSPSPRQH 354
>09_06_0277 -
21983049-21983080,21983250-21984788,21986619-21986655,
21987612-21987665,21987781-21987893,21988272-21988660,
21988783-21988903,21989245-21989342,21989963-21990153
Length = 857
Score = 28.3 bits (60), Expect = 9.4
Identities = 23/84 (27%), Positives = 27/84 (32%), Gaps = 7/84 (8%)
Frame = +2
Query: 524 PPXPPXXXPLXXXXPXLPNXALHXXXPPXXXXXXPXXPXI----XXIXXPLXPIXXFXPX 691
PP PP P P +P PP P P I PL P+ P
Sbjct: 378 PPPPPPMSPSCLLPPIIPAPTFTYSSPPPPPLYYPPPPDISPSPPPSVTPLPPVVYPSP- 436
Query: 692 XXXXQSXPKXLLXXXPP---PTPP 754
S P+ PP P+PP
Sbjct: 437 PEVTPSPPEIAPYPSPPEIVPSPP 460
>09_03_0145 - 12749288-12751510
Length = 740
Score = 28.3 bits (60), Expect = 9.4
Identities = 13/31 (41%), Positives = 13/31 (41%)
Frame = +3
Query: 654 PXPFXPSXXSPPPPAXXNXPXXHXXPXXPLP 746
P P P PPPPA P H P P P
Sbjct: 31 PPPPPPPGIQPPPPALPGMP--HGRPPPPFP 59
>06_02_0175 - 12624608-12625297
Length = 229
Score = 28.3 bits (60), Expect = 9.4
Identities = 14/38 (36%), Positives = 14/38 (36%)
Frame = -3
Query: 799 WGVPKGGVGXXDXXXGGSGRGXXGQXXFXGXLXXAGGG 686
WG GG G GG G G G G GGG
Sbjct: 89 WGTDSGGGGSSGGGGGGGGGGGGGGGGGGGGGGGGGGG 126
>05_01_0028 +
182528-183852,183967-184127,184872-185116,185330-186073
Length = 824
Score = 28.3 bits (60), Expect = 9.4
Identities = 13/34 (38%), Positives = 15/34 (44%)
Frame = +3
Query: 654 PXPFXPSXXSPPPPAXXNXPXXHXXPXXPLPLPP 755
P P P+ PPPPA + P P P PP
Sbjct: 92 PPPLLPTP--PPPPASISPTPAPPLPPPPAPAPP 123
>03_01_0515 - 3864796-3865425
Length = 209
Score = 28.3 bits (60), Expect = 9.4
Identities = 20/90 (22%), Positives = 23/90 (25%)
Frame = +1
Query: 523 PPXXPXXXXXXXXVPPXXQXXXAXXXTXXXXXPXPPSAXNXXDXPPPSXHXXLXPXXXXS 702
PP P PP P PP + PPP P S
Sbjct: 39 PPSPPTEASPPPLAPPPSVTSSPPPPAAGPLMPPPPPPPSVTSSPPPPPLPPPPPPPAAS 98
Query: 703 PIXPXXTXXXXXPSHSPPXXNXXXQPRLSV 792
P P + P S P P +V
Sbjct: 99 PPPPPPSPPPPSPVKSSPPPPPAWSPVTNV 128
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,215,198
Number of Sequences: 37544
Number of extensions: 227539
Number of successful extensions: 3899
Number of sequences better than 10.0: 41
Number of HSP's better than 10.0 without gapping: 1301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2856
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2706104940
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -