Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_J18
(862 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin M... 128 7e-30
D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin... 128 7e-30
AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensor... 128 7e-30
AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin... 128 7e-30
Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical p... 127 1e-29
Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical pr... 127 1e-29
D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin... 127 1e-29
Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical pr... 125 4e-29
D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin... 125 5e-29
Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical p... 123 1e-28
AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical ... 123 1e-28
U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha ... 123 2e-28
Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical pr... 118 5e-27
Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical pr... 111 5e-25
Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical pr... 111 8e-25
AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin... 111 8e-25
Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical p... 69 3e-12
Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical pr... 69 3e-12
Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical pr... 69 3e-12
X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin pr... 69 4e-12
U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory ... 69 4e-12
Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical pr... 67 2e-11
Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical p... 60 2e-09
Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical p... 60 2e-09
AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical... 30 1.8
Z69385-8|CAA93423.1| 529|Caenorhabditis elegans Hypothetical pr... 29 5.6
U53181-11|AAM29689.1| 315|Caenorhabditis elegans Hypothetical p... 28 9.8
U53181-10|AAA93489.2| 334|Caenorhabditis elegans Hypothetical p... 28 9.8
U49831-8|AAA93409.2| 280|Caenorhabditis elegans Hypothetical pr... 28 9.8
>U65429-1|AAB48241.1| 450|Caenorhabditis elegans alpha-tubulin
MEC-12 protein.
Length = 450
Score = 128 bits (308), Expect = 7e-30
Identities = 68/119 (57%), Positives = 76/119 (63%)
Frame = +1
Query: 334 PAAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVFGXN 513
P AV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL
Sbjct: 63 PRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRI 122
Query: 514 PQAR*PVYRVCXDXXXXXXXXXXXXXXXTSLIDGXSSVDYGXKSKLEXAIYPXPXGSTA 690
+ + TSL+ SVDYG K+KLE +IYP P STA
Sbjct: 123 RRLADNCTGL-QGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Score = 113 bits (272), Expect = 2e-25
Identities = 58/123 (47%), Positives = 71/123 (57%)
Frame = +2
Query: 173 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKLRTPXXXXX 352
GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+ P
Sbjct: 10 GQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR-HVPRAVMV 68
Query: 353 XXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRXXXXXXXXXXLERKS*IWFLDXIRKLADQ 532
S F L+ ++ + ++ LD IR+LAD
Sbjct: 69 DLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADN 128
Query: 533 CTG 541
CTG
Sbjct: 129 CTG 131
>D21134-1|BAA22203.1| 449|Caenorhabditis elegans alpha-3 tubulin
protein.
Length = 449
Score = 128 bits (308), Expect = 7e-30
Identities = 68/119 (57%), Positives = 76/119 (63%)
Frame = +1
Query: 334 PAAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVFGXN 513
P AV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL
Sbjct: 62 PRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRI 121
Query: 514 PQAR*PVYRVCXDXXXXXXXXXXXXXXXTSLIDGXSSVDYGXKSKLEXAIYPXPXGSTA 690
+ + TSL+ SVDYG K+KLE +IYP P STA
Sbjct: 122 RRLADNCTGL-QGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 179
Score = 113 bits (272), Expect = 2e-25
Identities = 58/123 (47%), Positives = 71/123 (57%)
Frame = +2
Query: 173 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKLRTPXXXXX 352
GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+ P
Sbjct: 9 GQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR-HVPRAVMV 67
Query: 353 XXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRXXXXXXXXXXLERKS*IWFLDXIRKLADQ 532
S F L+ ++ + ++ LD IR+LAD
Sbjct: 68 DLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADN 127
Query: 533 CTG 541
CTG
Sbjct: 128 CTG 130
>AF003387-1|AAB54263.2| 450|Caenorhabditis elegans Mechanosensory
abnormality protein12 protein.
Length = 450
Score = 128 bits (308), Expect = 7e-30
Identities = 68/119 (57%), Positives = 76/119 (63%)
Frame = +1
Query: 334 PAAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVFGXN 513
P AV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL
Sbjct: 63 PRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRI 122
Query: 514 PQAR*PVYRVCXDXXXXXXXXXXXXXXXTSLIDGXSSVDYGXKSKLEXAIYPXPXGSTA 690
+ + TSL+ SVDYG K+KLE +IYP P STA
Sbjct: 123 RRLADNCTGL-QGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Score = 113 bits (272), Expect = 2e-25
Identities = 58/123 (47%), Positives = 71/123 (57%)
Frame = +2
Query: 173 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKLRTPXXXXX 352
GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+ P
Sbjct: 10 GQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR-HVPRAVMV 68
Query: 353 XXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRXXXXXXXXXXLERKS*IWFLDXIRKLADQ 532
S F L+ ++ + ++ LD IR+LAD
Sbjct: 69 DLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADN 128
Query: 533 CTG 541
CTG
Sbjct: 129 CTG 131
>AB017190-1|BAA32600.1| 450|Caenorhabditis elegans Alpha tubulin
(tba-3) protein.
Length = 450
Score = 128 bits (308), Expect = 7e-30
Identities = 68/119 (57%), Positives = 76/119 (63%)
Frame = +1
Query: 334 PAAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVFGXN 513
P AV VDLEPTV+DE+RTGTYR LFHPEQLITGKEDAANNYARGHYTIGKEI+DL
Sbjct: 63 PRAVMVDLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRI 122
Query: 514 PQAR*PVYRVCXDXXXXXXXXXXXXXXXTSLIDGXSSVDYGXKSKLEXAIYPXPXGSTA 690
+ + TSL+ SVDYG K+KLE +IYP P STA
Sbjct: 123 RRLADNCTGL-QGFLVFHSFGGGTGSGFTSLLMERLSVDYGKKAKLEFSIYPAPQVSTA 180
Score = 113 bits (272), Expect = 2e-25
Identities = 58/123 (47%), Positives = 71/123 (57%)
Frame = +2
Query: 173 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKLRTPXXXXX 352
GQAGVQIGNACWELYCLEHGIQPDGQMP+DK++GG DDSF+TFFSETG+G+ P
Sbjct: 10 GQAGVQIGNACWELYCLEHGIQPDGQMPSDKSLGGSDDSFSTFFSETGSGR-HVPRAVMV 68
Query: 353 XXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRXXXXXXXXXXLERKS*IWFLDXIRKLADQ 532
S F L+ ++ + ++ LD IR+LAD
Sbjct: 69 DLEPTVIDEIRTGTYRSLFHPEQLITGKEDAANNYARGHYTIGKEIIDLTLDRIRRLADN 128
Query: 533 CTG 541
CTG
Sbjct: 129 CTG 131
>Z99709-10|CAB16856.1| 448|Caenorhabditis elegans Hypothetical
protein C47B2.3 protein.
Length = 448
Score = 127 bits (306), Expect = 1e-29
Identities = 65/119 (54%), Positives = 78/119 (65%)
Frame = +1
Query: 334 PAAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVFGXN 513
P ++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D V
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 514 PQAR*PVYRVCXDXXXXXXXXXXXXXXXTSLIDGXSSVDYGXKSKLEXAIYPXPXGSTA 690
+ + TSL+ SVDYG KSKLE +IYP P STA
Sbjct: 121 RRLADNCSGL-QGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Score = 89.8 bits (213), Expect = 2e-18
Identities = 50/123 (40%), Positives = 63/123 (51%)
Frame = +2
Query: 173 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKLRTPXXXXX 352
GQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+ P
Sbjct: 10 GQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGRY-VPRSIFV 66
Query: 353 XXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRXXXXXXXXXXLERKS*IWFLDXIRKLADQ 532
F ++ ++ + ++ LD IR+LAD
Sbjct: 67 DLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADN 126
Query: 533 CTG 541
C+G
Sbjct: 127 CSG 129
>Z81070-8|CAB03001.1| 449|Caenorhabditis elegans Hypothetical
protein F26E4.8 protein.
Length = 449
Score = 127 bits (306), Expect = 1e-29
Identities = 65/119 (54%), Positives = 78/119 (65%)
Frame = +1
Query: 334 PAAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVFGXN 513
P ++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D V
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 514 PQAR*PVYRVCXDXXXXXXXXXXXXXXXTSLIDGXSSVDYGXKSKLEXAIYPXPXGSTA 690
+ + TSL+ SVDYG KSKLE +IYP P STA
Sbjct: 121 RRLADNCSGL-QGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Score = 88.6 bits (210), Expect = 5e-18
Identities = 49/123 (39%), Positives = 63/123 (51%)
Frame = +2
Query: 173 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKLRTPXXXXX 352
GQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+ P
Sbjct: 10 GQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGRY-VPRSIFV 66
Query: 353 XXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRXXXXXXXXXXLERKS*IWFLDXIRKLADQ 532
F ++ ++ + ++ LD IR+LAD
Sbjct: 67 DLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADN 126
Query: 533 CTG 541
C+G
Sbjct: 127 CSG 129
>D14965-1|BAA03610.1| 448|Caenorhabditis elegans alpha-2 tubulin
protein.
Length = 448
Score = 127 bits (306), Expect = 1e-29
Identities = 65/119 (54%), Positives = 78/119 (65%)
Frame = +1
Query: 334 PAAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVFGXN 513
P ++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D V
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 514 PQAR*PVYRVCXDXXXXXXXXXXXXXXXTSLIDGXSSVDYGXKSKLEXAIYPXPXGSTA 690
+ + TSL+ SVDYG KSKLE +IYP P STA
Sbjct: 121 RRLADNCSGL-QGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Score = 89.8 bits (213), Expect = 2e-18
Identities = 50/123 (40%), Positives = 63/123 (51%)
Frame = +2
Query: 173 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKLRTPXXXXX 352
GQAGVQIGNACWELYCLEHGIQPDG MPT T G +SF TFFS+TG+G+ P
Sbjct: 10 GQAGVQIGNACWELYCLEHGIQPDGTMPTQSTNEG--ESFTTFFSDTGSGRY-VPRSIFV 66
Query: 353 XXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRXXXXXXXXXXLERKS*IWFLDXIRKLADQ 532
F ++ ++ + ++ LD IR+LAD
Sbjct: 67 DLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADN 126
Query: 533 CTG 541
C+G
Sbjct: 127 CSG 129
>Z78062-1|CAB01495.1| 447|Caenorhabditis elegans Hypothetical
protein F16D3.1 protein.
Length = 447
Score = 125 bits (302), Expect = 4e-29
Identities = 64/119 (53%), Positives = 78/119 (65%)
Frame = +1
Query: 334 PAAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVFGXN 513
P A+FVDLEPTV+DEVRTGTY +LFHPEQLI+GKEDAANNYARGHYTIGKE++D+V
Sbjct: 63 PRAIFVDLEPTVIDEVRTGTYAKLFHPEQLISGKEDAANNYARGHYTIGKELIDVVMDRV 122
Query: 514 PQAR*PVYRVCXDXXXXXXXXXXXXXXXTSLIDGXSSVDYGXKSKLEXAIYPXPXGSTA 690
+ + TSL+ S+DYG K+KLE +IYP P ST+
Sbjct: 123 RRLT-ERCQSLQGFLIFHSFGGGTGSGFTSLVMERLSIDYGKKAKLEFSIYPAPQISTS 180
Score = 90.6 bits (215), Expect = 1e-18
Identities = 39/51 (76%), Positives = 42/51 (82%)
Frame = +2
Query: 173 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 325
GQAGVQIGNACWELYCLEHGI PDG MP D + G D S+NTFFSET +GK
Sbjct: 10 GQAGVQIGNACWELYCLEHGITPDGLMPDDTSYGVEDQSYNTFFSETPSGK 60
>D16439-1|BAA03909.1| 449|Caenorhabditis elegans alpha-1 tubulin
protein.
Length = 449
Score = 125 bits (301), Expect = 5e-29
Identities = 64/119 (53%), Positives = 77/119 (64%)
Frame = +1
Query: 334 PAAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVFGXN 513
P ++FVDLEPTVVDE+RTGTY++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D V
Sbjct: 61 PRSIFVDLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRI 120
Query: 514 PQAR*PVYRVCXDXXXXXXXXXXXXXXXTSLIDGXSSVDYGXKSKLEXAIYPXPXGSTA 690
+ + TSL+ SVDYG KSKLE +IYP P TA
Sbjct: 121 RRLADNCSGL-QGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVCTA 178
Score = 88.6 bits (210), Expect = 5e-18
Identities = 49/123 (39%), Positives = 63/123 (51%)
Frame = +2
Query: 173 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKLRTPXXXXX 352
GQAGVQIGNACWELYCLEHGIQPDG MP+D+ G +SF TFFS+TG G+ P
Sbjct: 10 GQAGVQIGNACWELYCLEHGIQPDGTMPSDQQADG--ESFTTFFSDTGNGRY-VPRSIFV 66
Query: 353 XXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRXXXXXXXXXXLERKS*IWFLDXIRKLADQ 532
F ++ ++ + ++ LD IR+LAD
Sbjct: 67 DLEPTVVDEIRTGTYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTVLDRIRRLADN 126
Query: 533 CTG 541
C+G
Sbjct: 127 CSG 129
>Z37092-12|CAA85463.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 123 bits (297), Expect = 1e-28
Identities = 63/119 (52%), Positives = 76/119 (63%)
Frame = +1
Query: 334 PAAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVFGXN 513
P ++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 514 PQAR*PVYRVCXDXXXXXXXXXXXXXXXTSLIDGXSSVDYGXKSKLEXAIYPXPXGSTA 690
+ + TSL+ SVDYG KSKLE +IYP P STA
Sbjct: 121 RRLADNCSGL-QGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Score = 88.2 bits (209), Expect = 7e-18
Identities = 49/123 (39%), Positives = 64/123 (52%)
Frame = +2
Query: 173 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKLRTPXXXXX 352
GQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+ P
Sbjct: 10 GQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGRY-VPRSIFV 66
Query: 353 XXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRXXXXXXXXXXLERKS*IWFLDXIRKLADQ 532
+ F ++ ++ + ++ LD IR+LAD
Sbjct: 67 DLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIRRLADN 126
Query: 533 CTG 541
C+G
Sbjct: 127 CSG 129
>AL023832-2|CAA19476.1| 448|Caenorhabditis elegans Hypothetical
protein F44F4.11 protein.
Length = 448
Score = 123 bits (297), Expect = 1e-28
Identities = 63/119 (52%), Positives = 76/119 (63%)
Frame = +1
Query: 334 PAAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVFGXN 513
P ++FVDLEPTVVDE+RTG Y++LFHPEQ+ITGKEDAANNYARGHYT+GKE++D
Sbjct: 61 PRSIFVDLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRI 120
Query: 514 PQAR*PVYRVCXDXXXXXXXXXXXXXXXTSLIDGXSSVDYGXKSKLEXAIYPXPXGSTA 690
+ + TSL+ SVDYG KSKLE +IYP P STA
Sbjct: 121 RRLADNCSGL-QGFFVFHSFGGGTGSGFTSLLMERLSVDYGKKSKLEFSIYPAPQVSTA 178
Score = 88.2 bits (209), Expect = 7e-18
Identities = 49/123 (39%), Positives = 64/123 (52%)
Frame = +2
Query: 173 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKLRTPXXXXX 352
GQAGVQIGNACWELYCLEHGIQPDG MP+++ GG SF TFFS+TG G+ P
Sbjct: 10 GQAGVQIGNACWELYCLEHGIQPDGTMPSEQQNEGG--SFTTFFSDTGNGRY-VPRSIFV 66
Query: 353 XXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRXXXXXXXXXXLERKS*IWFLDXIRKLADQ 532
+ F ++ ++ + ++ LD IR+LAD
Sbjct: 67 DLEPTVVDEIRTGNYKKLFHPEQMITGKEDAANNYARGHYTVGKELIDTTLDRIRRLADN 126
Query: 533 CTG 541
C+G
Sbjct: 127 CSG 129
>U40420-4|AAA81432.2| 456|Caenorhabditis elegans Tubulin, alpha
protein 9 protein.
Length = 456
Score = 123 bits (296), Expect = 2e-28
Identities = 64/119 (53%), Positives = 75/119 (63%)
Frame = +1
Query: 334 PAAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVFGXN 513
P A+ VDLEPT +DE+RTGTY+ LFHPEQL+TGKEDAANNYARGHYTIGKEI+D+V
Sbjct: 68 PRAIMVDLEPTPIDEIRTGTYKTLFHPEQLLTGKEDAANNYARGHYTIGKEIIDVVM-DR 126
Query: 514 PQAR*PVYRVCXDXXXXXXXXXXXXXXXTSLIDGXSSVDYGXKSKLEXAIYPXPXGSTA 690
+ R T+L+ SVDYG KSKLE IYP P ST+
Sbjct: 127 VRRLVENCRGLQGFLVFHSFGGGTGSGFTALLMERLSVDYGKKSKLEFCIYPAPQVSTS 185
Score = 91.9 bits (218), Expect = 5e-19
Identities = 39/51 (76%), Positives = 44/51 (86%)
Frame = +2
Query: 173 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 325
GQAGVQ+GNACWELYCLEHGIQPDG + + ++G DDSFNTFFSET AGK
Sbjct: 15 GQAGVQMGNACWELYCLEHGIQPDGMINEEDSLGVDDDSFNTFFSETMAGK 65
>Z81134-1|CAB03447.1| 444|Caenorhabditis elegans Hypothetical
protein T28D6.2 protein.
Length = 444
Score = 118 bits (284), Expect = 5e-27
Identities = 60/127 (47%), Positives = 77/127 (60%)
Frame = +1
Query: 310 DRSWQAPYPAAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEI 489
D + P ++FVDLEPTVVDE+RTG Y++LFHPEQ++TGKEDAANNYARGHYT+GKEI
Sbjct: 52 DTGYGRHVPRSIFVDLEPTVVDEIRTGAYKKLFHPEQMLTGKEDAANNYARGHYTVGKEI 111
Query: 490 VDLVFGXNPQAR*PVYRVCXDXXXXXXXXXXXXXXXTSLIDGXSSVDYGXKSKLEXAIYP 669
+D + + TS++ S +YG KSKLE +IYP
Sbjct: 112 IDTTLDRIRRLANNCEGL-QGFFVFHSFGGGTGSGFTSMLMERLSAEYGKKSKLEFSIYP 170
Query: 670 XPXGSTA 690
P ST+
Sbjct: 171 APQISTS 177
Score = 73.3 bits (172), Expect = 2e-13
Identities = 34/51 (66%), Positives = 36/51 (70%)
Frame = +2
Query: 173 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 325
GQAGVQIGNACWELYCLEHGI PDG T G S TFFS+TG G+
Sbjct: 10 GQAGVQIGNACWELYCLEHGILPDG---TSMEPDGNSGSLGTFFSDTGYGR 57
>Z37140-7|CAA85497.2| 452|Caenorhabditis elegans Hypothetical
protein ZK899.4 protein.
Length = 452
Score = 111 bits (268), Expect = 5e-25
Identities = 56/119 (47%), Positives = 74/119 (62%)
Frame = +1
Query: 334 PAAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVFGXN 513
P A++VDLEPTV+DE+R G Y LFHP+Q+I GKEDAANNYARGHYTIGKE++D+V
Sbjct: 66 PRAIYVDLEPTVLDEIRNGVYGNLFHPDQIINGKEDAANNYARGHYTIGKELIDVVL-DR 124
Query: 514 PQAR*PVYRVCXDXXXXXXXXXXXXXXXTSLIDGXSSVDYGXKSKLEXAIYPXPXGSTA 690
+ + +SL+ SV++G KSKLE ++YP P ST+
Sbjct: 125 IRKQTENCEGLQGFLVFHSFGGGTGSGFSSLLMERLSVEFGKKSKLEFSVYPAPQVSTS 183
Score = 57.6 bits (133), Expect = 1e-08
Identities = 26/51 (50%), Positives = 32/51 (62%)
Frame = +2
Query: 173 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 325
GQAG QIGNACWELYC+EHG+ G + ++ S FFSE+ GK
Sbjct: 14 GQAGAQIGNACWELYCIEHGLDEAGFLKEEEK-NKKQQSLQAFFSESMNGK 63
>Z81523-9|CAB04246.2| 464|Caenorhabditis elegans Hypothetical
protein F32H2.9 protein.
Length = 464
Score = 111 bits (266), Expect = 8e-25
Identities = 60/119 (50%), Positives = 71/119 (59%)
Frame = +1
Query: 334 PAAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVFGXN 513
P +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++D+V
Sbjct: 69 PRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRV 128
Query: 514 PQAR*PVYRVCXDXXXXXXXXXXXXXXXTSLIDGXSSVDYGXKSKLEXAIYPXPXGSTA 690
+ SL+ S +YG K KLE AIYP P ST+
Sbjct: 129 KRLA-ENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTS 186
Score = 80.6 bits (190), Expect = 1e-15
Identities = 45/123 (36%), Positives = 58/123 (47%)
Frame = +2
Query: 173 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKLRTPXXXXX 352
GQAGVQIGNACWEL+CLEHGIQPDG D T ++ NTFF+ET GK P
Sbjct: 16 GQAGVQIGNACWELFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGK-HVPRCLFV 74
Query: 353 XXXXXXXXXXXXAHTDSCFIQNNLLLVRKMRXXXXXXXXXXLERKS*IWFLDXIRKLADQ 532
S F LL ++ + R+ +D +++LA+
Sbjct: 75 DLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAEN 134
Query: 533 CTG 541
C G
Sbjct: 135 CNG 137
>AB017191-1|BAA32601.1| 435|Caenorhabditis elegans alpha tubulin
(tba-6) protein.
Length = 435
Score = 111 bits (266), Expect = 8e-25
Identities = 60/119 (50%), Positives = 71/119 (59%)
Frame = +1
Query: 334 PAAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLVFGXN 513
P +FVDLEPTVVDEVRTGTYR LFHPEQL++GKEDAAN YARG YTIG+E++D+V
Sbjct: 41 PRCLFVDLEPTVVDEVRTGTYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRV 100
Query: 514 PQAR*PVYRVCXDXXXXXXXXXXXXXXXTSLIDGXSSVDYGXKSKLEXAIYPXPXGSTA 690
+ SL+ S +YG K KLE AIYP P ST+
Sbjct: 101 KRLA-ENCNGLQGFVIFHSFGGGTGSGFLSLLMERLSTEYGKKPKLEFAIYPAPQVSTS 158
Score = 49.6 bits (113), Expect = 3e-06
Identities = 31/110 (28%), Positives = 45/110 (40%)
Frame = +2
Query: 212 LYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGKLRTPXXXXXXXXXXXXXXXXXA 391
++CLEHGIQPDG D T ++ NTFF+ET GK P
Sbjct: 1 MFCLEHGIQPDGYHVEDDTYDEETETINTFFAETAGGK-HVPRCLFVDLEPTVVDEVRTG 59
Query: 392 HTDSCFIQNNLLLVRKMRXXXXXXXXXXLERKS*IWFLDXIRKLADQCTG 541
S F LL ++ + R+ +D +++LA+ C G
Sbjct: 60 TYRSLFHPEQLLSGKEDAANCYARGRYTIGREMIDVVMDRVKRLAENCNG 109
>Z92803-10|CAB07246.1| 449|Caenorhabditis elegans Hypothetical
protein K01G5.7 protein.
Length = 449
Score = 69.3 bits (162), Expect = 3e-12
Identities = 30/56 (53%), Positives = 39/56 (69%)
Frame = +1
Query: 334 PAAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 501
P AV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD V
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNV 116
Score = 39.5 bits (88), Expect = 0.003
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +2
Query: 173 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 325
GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 10 GQCGNQIGSKFWEVISDEHGIQPDGTFKGESDL--QLERIDVYYNEANNGK 58
>Z77131-2|CAB00853.4| 444|Caenorhabditis elegans Hypothetical
protein C54C6.2 protein.
Length = 444
Score = 69.3 bits (162), Expect = 3e-12
Identities = 30/56 (53%), Positives = 39/56 (69%)
Frame = +1
Query: 334 PAAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 501
P AV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD V
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNV 116
Score = 40.7 bits (91), Expect = 0.001
Identities = 20/51 (39%), Positives = 27/51 (52%)
Frame = +2
Query: 173 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 325
GQ G QIG WE+ EHGIQPDG + + + N +++E GK
Sbjct: 10 GQCGNQIGAKFWEVISDEHGIQPDGTYKGESDL--QLERINVYYNEANGGK 58
>Z35597-5|CAA84648.1| 450|Caenorhabditis elegans Hypothetical
protein C36E8.5 protein.
Length = 450
Score = 69.3 bits (162), Expect = 3e-12
Identities = 30/56 (53%), Positives = 39/56 (69%)
Frame = +1
Query: 334 PAAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 501
P AV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD V
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNV 116
Score = 39.1 bits (87), Expect = 0.004
Identities = 19/51 (37%), Positives = 28/51 (54%)
Frame = +2
Query: 173 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 325
GQ G QIG+ WE+ EHGIQPDG + + + + +++E GK
Sbjct: 10 GQCGNQIGSKFWEVISDEHGIQPDGTFKGETDL--QLERIDVYYNEANNGK 58
>X15242-1|CAA33320.1| 441|Caenorhabditis elegans beta-tubulin
protein.
Length = 441
Score = 68.9 bits (161), Expect = 4e-12
Identities = 30/56 (53%), Positives = 39/56 (69%)
Frame = +1
Query: 334 PAAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 501
P AV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD V
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNV 116
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +2
Query: 173 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 325
GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 10 GQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDL--QLERINVYYNEAGSNK 58
>U70844-1|AAB09092.1| 441|Caenorhabditis elegans Mechanosensory
abnormality protein7 protein.
Length = 441
Score = 68.9 bits (161), Expect = 4e-12
Identities = 30/56 (53%), Positives = 39/56 (69%)
Frame = +1
Query: 334 PAAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 501
P AV VDLEP +D VR+G + QLF P+ + G+ A NN+A+GHYT G E+VD V
Sbjct: 61 PRAVLVDLEPGTMDSVRSGPFGQLFRPDNYVFGQSGAGNNWAKGHYTEGAELVDNV 116
Score = 41.5 bits (93), Expect = 7e-04
Identities = 20/51 (39%), Positives = 28/51 (54%)
Frame = +2
Query: 173 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 325
GQ G QIG+ WE+ EHGI P GQ D + + N +++E G+ K
Sbjct: 10 GQCGNQIGSKFWEVISDEHGIDPSGQYVGDSDL--QLERINVYYNEAGSNK 58
>Z46240-1|CAA86310.1| 444|Caenorhabditis elegans Hypothetical
protein B0272.1 protein.
Length = 444
Score = 66.9 bits (156), Expect = 2e-11
Identities = 29/56 (51%), Positives = 37/56 (66%)
Frame = +1
Query: 334 PAAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 501
P A VDLEP +D VR G + QLF P+ + G+ A NN+A+GHYT G E+VD V
Sbjct: 61 PRACLVDLEPGTMDSVRAGPFGQLFRPDNFVFGQSGAGNNWAKGHYTEGAELVDNV 116
Score = 37.1 bits (82), Expect = 0.016
Identities = 19/51 (37%), Positives = 25/51 (49%)
Frame = +2
Query: 173 GQAGVQIGNACWELYCLEHGIQPDGQMPTDKTIGGGDDSFNTFFSETGAGK 325
GQ G QIG WE+ EHGI P G D + + N +++E GK
Sbjct: 10 GQCGNQIGAKFWEVISDEHGIDPTGAYNGDSDL--QLERINVYYNEASGGK 58
>Z78200-11|CAB01587.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 60.1 bits (139), Expect = 2e-09
Identities = 26/56 (46%), Positives = 38/56 (67%)
Frame = +1
Query: 334 PAAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 501
P A+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD V
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKV 116
Score = 33.1 bits (72), Expect = 0.26
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = +2
Query: 173 GQAGVQIGNACWELYCLEHGIQPDGQMPTD 262
GQ G QIG WE EHG+Q DG D
Sbjct: 10 GQCGNQIGAKFWEYISEEHGLQTDGTYKGD 39
>Z78198-13|CAB01575.2| 426|Caenorhabditis elegans Hypothetical
protein T04H1.9 protein.
Length = 426
Score = 60.1 bits (139), Expect = 2e-09
Identities = 26/56 (46%), Positives = 38/56 (67%)
Frame = +1
Query: 334 PAAVFVDLEPTVVDEVRTGTYRQLFHPEQLITGKEDAANNYARGHYTIGKEIVDLV 501
P A+ VDL+P ++ VR+ Y +LF PE ++G+ A NN++RG+Y G EIVD V
Sbjct: 61 PRAILVDLDPESINYVRSTQYGKLFDPENAVSGESGAGNNWSRGYYEQGAEIVDKV 116
Score = 33.1 bits (72), Expect = 0.26
Identities = 15/30 (50%), Positives = 16/30 (53%)
Frame = +2
Query: 173 GQAGVQIGNACWELYCLEHGIQPDGQMPTD 262
GQ G QIG WE EHG+Q DG D
Sbjct: 10 GQCGNQIGAKFWEYISEEHGLQTDGTYKGD 39
>AC199169-10|ABO33258.1| 475|Caenorhabditis elegans Hypothetical
protein F38A1.7 protein.
Length = 475
Score = 30.3 bits (65), Expect = 1.8
Identities = 17/39 (43%), Positives = 20/39 (51%)
Frame = -2
Query: 438 FLTSNKLFWMKQLSVCASADLINNSRFKIDEDSSGVRSL 322
FL K F K ++VC S LI R+ DED S SL
Sbjct: 232 FLNFQKFFNNKDVTVCGSVCLILEKRYPNDEDISKTVSL 270
>Z69385-8|CAA93423.1| 529|Caenorhabditis elegans Hypothetical
protein ZK593.9 protein.
Length = 529
Score = 28.7 bits (61), Expect = 5.6
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 7/68 (10%)
Frame = -2
Query: 411 MKQLSVCASADLI--NNSRFKIDED---SSGVRSLPAPVSLKKVLKESS--PPPMVLSVG 253
+K+L +L+ N + +ID + S+G +P S KK+ ++ PPP V +V
Sbjct: 366 VKKLETWLEVELVLDENEKPEIDPELNRSNGNMPIPVDSSTKKMRNDTVCIPPPEVSAV- 424
Query: 252 IWPSGWMP 229
+ P GW P
Sbjct: 425 VPPDGWAP 432
>U53181-11|AAM29689.1| 315|Caenorhabditis elegans Hypothetical
protein F36D4.5b protein.
Length = 315
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +3
Query: 174 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELASSVP 335
++ +SRS P F W+T + + QT P+G T++ S++ +S P
Sbjct: 248 SEKKSRSNSPP-IFRIWNTIKATINGTQQTAPTGAATVIPASSASNIGKTNSTP 300
>U53181-10|AAA93489.2| 334|Caenorhabditis elegans Hypothetical
protein F36D4.5a protein.
Length = 334
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/54 (27%), Positives = 27/54 (50%)
Frame = +3
Query: 174 AKPESRSVMPAGSFTAWSTASSLMARCPQTRPSGVETILSTLSSARPELASSVP 335
++ +SRS P F W+T + + QT P+G T++ S++ +S P
Sbjct: 267 SEKKSRSNSPP-IFRIWNTIKATINGTQQTAPTGAATVIPASSASNIGKTNSTP 319
>U49831-8|AAA93409.2| 280|Caenorhabditis elegans Hypothetical
protein F10C1.5 protein.
Length = 280
Score = 27.9 bits (59), Expect = 9.8
Identities = 15/36 (41%), Positives = 21/36 (58%), Gaps = 1/36 (2%)
Frame = -2
Query: 372 NNSRFKIDEDSSGVRSLP-APVSLKKVLKESSPPPM 268
NN+ + EDS G RS P +P + V+ SSPP +
Sbjct: 129 NNNTEEKYEDSQGQRSSPSSPTGSETVVSTSSPPEL 164
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,380,150
Number of Sequences: 27780
Number of extensions: 327983
Number of successful extensions: 883
Number of sequences better than 10.0: 29
Number of HSP's better than 10.0 without gapping: 806
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 873
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2150453690
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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