Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= MFBP07_F_J17
(905 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
02_05_0884 - 32483735-32483866,32484417-32484491,32484707-324847... 158 6e-39
06_01_0285 - 2090427-2090558,2091045-2091119,2091334-2091407,209... 156 2e-38
05_01_0588 + 5278013-5278153,5278641-5278782,5278923-5279019,527... 87 2e-17
06_01_0539 + 3869156-3869908 46 4e-05
06_01_0529 + 3831100-3831852 46 4e-05
06_01_0479 + 3419657-3420337 46 4e-05
09_04_0728 - 19771975-19772093,19772131-19772224,19772322-197725... 36 0.044
01_01_0471 - 3467275-3467351,3467526-3467895,3468258-3468555,346... 30 2.2
06_01_0387 - 2770387-2770514,2770963-2771063,2771152-2771255,277... 29 3.8
04_01_0069 - 697811-697876,697956-698166,698265-698359,698448-69... 29 3.8
03_02_0435 - 8406262-8406419,8406499-8406547,8406577-8407458,840... 29 6.7
>02_05_0884 -
32483735-32483866,32484417-32484491,32484707-32484780,
32485180-32485291,32485476-32485548,32485674-32485729,
32486046-32486122,32486799-32486940
Length = 246
Score = 158 bits (383), Expect = 6e-39
Identities = 69/135 (51%), Positives = 97/135 (71%)
Frame = +1
Query: 169 SAPHSTGTSIMACEFDGGVVIGADSRTTTGAYIANRVTDKLTKITDQIYCCRSGSAADTQ 348
S H GT+I+ +DGGVV+ ADSRT+TG Y+ANR +DK+T++TD +Y CRSGSAADTQ
Sbjct: 19 SGEHRMGTTIVGVCYDGGVVLAADSRTSTGMYVANRASDKITQLTDNVYICRSGSAADTQ 78
Query: 349 AIADIVTYHLNFHKMELGDPPLVETAAAIFRELCYNYRDSLMAGILVAGWDKKKGAQIYS 528
I+D V Y L+ H ++LG P V+ AA + R L Y ++ L AG++V GWDK +G QI+S
Sbjct: 79 VISDYVRYFLHQHTIQLGQPATVKVAANLIRLLAYQNKNMLQAGMIVGGWDKYEGGQIFS 138
Query: 529 IPIGGMVQRPAVSLG 573
+P+GG + R ++G
Sbjct: 139 VPLGGTILRQPFAIG 153
>06_01_0285 -
2090427-2090558,2091045-2091119,2091334-2091407,
2091792-2091903,2092036-2092108,2092291-2092346,
2092679-2092755,2093384-2093525
Length = 246
Score = 156 bits (379), Expect = 2e-38
Identities = 68/135 (50%), Positives = 97/135 (71%)
Frame = +1
Query: 169 SAPHSTGTSIMACEFDGGVVIGADSRTTTGAYIANRVTDKLTKITDQIYCCRSGSAADTQ 348
S H GT+I+ +DGGVV+ ADSRT+TG Y+ANR +DK+T++TD +Y CRSGSAADTQ
Sbjct: 19 SGEHRMGTTIVGVCYDGGVVLAADSRTSTGMYVANRASDKITQLTDNVYVCRSGSAADTQ 78
Query: 349 AIADIVTYHLNFHKMELGDPPLVETAAAIFRELCYNYRDSLMAGILVAGWDKKKGAQIYS 528
I++ V Y L+ H ++LG P V+ AA + R L Y ++ L AG++V GWDK +G QI+S
Sbjct: 79 VISEYVRYFLHQHTIQLGQPATVKVAANLIRLLAYQNKNMLQAGMIVGGWDKYEGGQIFS 138
Query: 529 IPIGGMVQRPAVSLG 573
+P+GG + R ++G
Sbjct: 139 VPLGGTILRQPFAIG 153
>05_01_0588 +
5278013-5278153,5278641-5278782,5278923-5279019,
5279130-5279199,5279284-5279388,5279531-5279629,
5280062-5280152,5280238-5280311
Length = 272
Score = 86.6 bits (205), Expect = 2e-17
Identities = 42/132 (31%), Positives = 76/132 (57%), Gaps = 1/132 (0%)
Frame = +1
Query: 184 TGTSIMACEFDGGVVIGADSRTTTGAYIANRVTDKLTKITDQIYCCRSGSAADTQAIADI 363
TGT+I+ F GVV+GAD+R T G +A++ +K+ + IYCC +G+AADT+A+ D+
Sbjct: 37 TGTTIVGLVFQDGVVLGADTRATEGPIVADKNCEKIHYMAPNIYCCGAGTAADTEAVTDM 96
Query: 364 VTYHLNFHKMELGDPPLVETAAAIFRELCYNYRDSLMAGILVAGWDKKKGAQIYSI-PIG 540
V+ L H+ G V T+ + + ++Y+ + A +++ G D G ++++ P G
Sbjct: 97 VSSQLQLHRYATGRESRVVTSLTLLKSHLFSYQGHVSAALVLGGVD-VTGPHLHTVYPHG 155
Query: 541 GMVQRPAVSLGA 576
P ++G+
Sbjct: 156 STDTLPFATMGS 167
>06_01_0539 + 3869156-3869908
Length = 250
Score = 46.0 bits (104), Expect = 4e-05
Identities = 35/143 (24%), Positives = 59/143 (41%), Gaps = 6/143 (4%)
Frame = +1
Query: 166 MSAPHSTGTSIMACEFDGGVVIGADSRTTTGAYIANRVTDKLTKITDQIYCCRSGSAADT 345
M A + G+++ DG V++G + + T+ +R +K+ KI + C +G +D
Sbjct: 25 MEAIGNAGSALGVLAADGVVLVG-EKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDA 83
Query: 346 QAIADIVTYHLNFHKMELGDPPLVETAAAIFRELCYNYRD-----SLMAGILVAGWDKKK 510
+ + H + + +P VE + Y L AGWDK
Sbjct: 84 NILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHH 143
Query: 511 GAQIY-SIPIGGMVQRPAVSLGA 576
G Q+Y S P G A ++GA
Sbjct: 144 GFQLYMSDPSGNYSGWKAAAVGA 166
>06_01_0529 + 3831100-3831852
Length = 250
Score = 46.0 bits (104), Expect = 4e-05
Identities = 35/143 (24%), Positives = 59/143 (41%), Gaps = 6/143 (4%)
Frame = +1
Query: 166 MSAPHSTGTSIMACEFDGGVVIGADSRTTTGAYIANRVTDKLTKITDQIYCCRSGSAADT 345
M A + G+++ DG V++G + + T+ +R +K+ KI + C +G +D
Sbjct: 25 MEAIGNAGSALGVLAADGVVLVG-EKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDA 83
Query: 346 QAIADIVTYHLNFHKMELGDPPLVETAAAIFRELCYNYRD-----SLMAGILVAGWDKKK 510
+ + H + + +P VE + Y L AGWDK
Sbjct: 84 NILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHH 143
Query: 511 GAQIY-SIPIGGMVQRPAVSLGA 576
G Q+Y S P G A ++GA
Sbjct: 144 GFQLYMSDPSGNYSGWKAAAVGA 166
>06_01_0479 + 3419657-3420337
Length = 226
Score = 46.0 bits (104), Expect = 4e-05
Identities = 35/143 (24%), Positives = 59/143 (41%), Gaps = 6/143 (4%)
Frame = +1
Query: 166 MSAPHSTGTSIMACEFDGGVVIGADSRTTTGAYIANRVTDKLTKITDQIYCCRSGSAADT 345
M A + G+++ DG V++G + + T+ +R +K+ KI + C +G +D
Sbjct: 1 MEAIGNAGSALGVLAADGVVLVG-EKKVTSKLLQTSRSAEKMYKIDSHLACAVAGIMSDA 59
Query: 346 QAIADIVTYHLNFHKMELGDPPLVETAAAIFRELCYNYRD-----SLMAGILVAGWDKKK 510
+ + H + + +P VE + Y L AGWDK
Sbjct: 60 NILLNTARLHAQRYALSYQEPIPVEQLVQSLCDTKQGYTQFGGLRPFGVSFLFAGWDKHH 119
Query: 511 GAQIY-SIPIGGMVQRPAVSLGA 576
G Q+Y S P G A ++GA
Sbjct: 120 GFQLYMSDPSGNYSGWKAAAVGA 142
>09_04_0728 -
19771975-19772093,19772131-19772224,19772322-19772507,
19772596-19772767,19772854-19772983,19773060-19773136,
19774109-19774194,19774508-19774585,19775916-19776045,
19776379-19776423,19776508-19776618,19776801-19777057,
19777153-19777302,19777899-19778008,19778426-19778546
Length = 621
Score = 35.9 bits (79), Expect = 0.044
Identities = 28/122 (22%), Positives = 57/122 (46%), Gaps = 5/122 (4%)
Frame = +1
Query: 175 PHSTGTSIMACEFDGGVVIGADSRTTTGAYIANRVTDKLTKITDQIYCCRSGSAADTQAI 354
P+ TG+SI+A ++ GV++ +D+ + G+ + + +++ + SG +D Q I
Sbjct: 365 PYVTGSSIIALKYKDGVIMASDTGASYGSTLRYKSVERIKAVGKHSLIGASGEFSDFQEI 424
Query: 355 ADIV-TYHLNFHKMELGDPPLVETAAAIFRELCYNYR---DSLMAGILVAGWDK-KKGAQ 519
+ L+ H + G+ + + + YN R D L +++ G K KG +
Sbjct: 425 LRYLDELTLSDHMWDDGNSLGPKEVHSYLTRVMYNRRNKFDPLWNSLVIGGVKKGPKGEE 484
Query: 520 IY 525
Y
Sbjct: 485 KY 486
>01_01_0471 -
3467275-3467351,3467526-3467895,3468258-3468555,
3468680-3469734,3469823-3470467
Length = 814
Score = 30.3 bits (65), Expect = 2.2
Identities = 23/74 (31%), Positives = 33/74 (44%), Gaps = 1/74 (1%)
Frame = +1
Query: 151 CLPEWMSAPHSTGTSIMACEFDGGVVIGADS-RTTTGAYIANRVTDKLTKITDQIYCCRS 327
C P+ +S H G S + D A R T A++ + VTDKLT + + +S
Sbjct: 623 CTPKRISNGHKGGASGGSAISDSEDPFRASQLRYTPRAHLIHSVTDKLTVLAKEAASQKS 682
Query: 328 GSAADTQAIADIVT 369
S +A D VT
Sbjct: 683 CSRGKCRAFVDQVT 696
>06_01_0387 -
2770387-2770514,2770963-2771063,2771152-2771255,
2771345-2771507,2771550-2771596,2772818-2772946
Length = 223
Score = 29.5 bits (63), Expect = 3.8
Identities = 15/52 (28%), Positives = 25/52 (48%), Gaps = 1/52 (1%)
Frame = +1
Query: 424 AAAIFRELCYNYRD-SLMAGILVAGWDKKKGAQIYSIPIGGMVQRPAVSLGA 576
A+ + + Y+YR L G ++AGWD+K Y G + S+G+
Sbjct: 85 ASKLLANILYSYRGMGLSIGTMIAGWDEKGPGLYYVDSEGARLMGSRFSVGS 136
>04_01_0069 -
697811-697876,697956-698166,698265-698359,698448-698513,
698595-698643,698720-698770,698856-698908,699263-699331,
699874-699928,700011-700099,700217-700302,700376-700432,
700575-700716,701637-702032
Length = 494
Score = 29.5 bits (63), Expect = 3.8
Identities = 12/20 (60%), Positives = 16/20 (80%)
Frame = +1
Query: 550 QRPAVSLGAPDPPTSMATLT 609
Q+PAV++ AP P T+MAT T
Sbjct: 97 QQPAVAVAAPPPATTMATAT 116
>03_02_0435 -
8406262-8406419,8406499-8406547,8406577-8407458,
8408976-8409127,8410346-8410616
Length = 503
Score = 28.7 bits (61), Expect = 6.7
Identities = 10/34 (29%), Positives = 19/34 (55%)
Frame = +2
Query: 473 WLVF*LLDGTKRKELKFTPYLLVVWCSAQRCHWG 574
WLV+ L++G + + + F+ + V+W WG
Sbjct: 294 WLVWFLMEGARSRPIWFSLLIYVIWLIEMPWFWG 327
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 22,093,478
Number of Sequences: 37544
Number of extensions: 443787
Number of successful extensions: 1129
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1094
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1129
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2565528060
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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